ViewGene

Locus Name:
GeneID:
Location:

GeneID:7018
TrivialName: PA14_01280
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01280
PAO1 Ortholog Locus:
Sequence Length:2889
Protein Length:962
Start: 128031
Stop: 125143
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAC18318.1| (AP005219) hypothetical protein [Corynebacterium efficiens YS-314]
Identities = 126/507 (24%), Positives = 165/507 (32%), Gaps = 113/507 (22%)
Sequence:
ATGGCGCGCTCCTCACTTGACCTCGGGCGGGGTGCTGAAGGTGTGGTAGGGCGCCGGCGAAGGGATGCTCCA
CTCCAGGCCCTCGGCGCCGTCCCAGGGCTTGGCAGGGGCCGGCTTGCCGCCGCGGATGCACTTGATGACGAT
GAACAGGAACAGCAGCTGGGTGGTGCCGAACATGAAGGCGCCGATCGACGAGACCATGTTGAAGTCGGCGAA
CTGCAGGTTGTAGTCGGGGATCCGTCGCGGCATGCCGGCGAGGCCGACGAAGTGCATCGGGAAGAACGCCAG
GTTCATGCCGATGAAGCTCATCCAGAAGTGCAGCTTGCCGAGGGTCTCGTCGTACATGTGGCCGGTCCACTT
CGGCAGCCAGTAGTAGGCCGAGGCGAAGATGCCGAAGATCGCGCCGGGCACCAGCACGTAGTGGAAGTGGGC
GACCACGAAGTAGGTGTCGTGGTACTGGAAGTCCGCCGGGGCGATCGCCAGCATCAGTCCGGAGAAGCCGCC
GATGGTGAACAGGATGACGAAGGCCACGGCGAACAGCATCGGCGTCTCGAAGGTCAGCGAACCCTCCCACAT
GGTGGTCACCCAGTTGAACACCTTCACCCCGGTGGGCACCGCGATCAGCATGGTGGCGTACATGAAGAACAG
CTCGCCGGTGACCGGGATGCCGACCACGAACATGTGGTGCGCCCAGACCACGAAGGAGAGGAAGGCGATGCT
GGCGGTGGCGTAGACCATCGAGGTGTAGCCGAACAGCGGCTTGCGCGCGAAGGTCGGGATGATCGCACTGAC
CGCACCGAAGGCGGGCAGGATCATGATGTACACCTCGGGGTGGCCGAAGAACCAGAACACGTGCTGGAACAG
CACCGGGTCGCCGCCGCCGGCGGCGCTGAAGAAGCTGGTGCCGAAGTGGATGTCCATCAGCATCATGGTCAC
CACGCCGGCCAGCACCGGCATCACCGCGATCAACAGGAACGCGGTGATCAGCCAGGTCCAGACGAACAGCGG
CATCTTCATCAGGGTCATGCCCGGGGCGCGCAGGTTGAGGATGGTGGCGATCACGTTGATCGCGCCCATGAT
CGAGCTGATCCCGGCCAGGTGGATGGCGAAGATGAAGAAGGTCACGCTGTGCGGGGCGAAGGTGGTCGACAG
CGGCGCGTAGAAGGTCCAGCCGAAGTTGGGACCGCCGCCGGGCATGAACAGGGTGCTGACCAGCAGGCCGAA
GGCCGCCGGCAGCAGCCAGAAGCTGAAGTTGTTCATCCGCGGCAGGGCCATGTCCGGCGCGCCGATCATCAG
CGGGATCATCCAGTTGGCCAGGCCGACGAAGGCCGGCATCACCGCGCCGAAGACCATGATCAGGCCGTGCAT
GGTGGTCATCTGGTTGAAGAACGCCGGCTCGACGATCTGCAGGCCGGGCTGGAACAGCTCGGCGCGGATCAC
CATGGCCATCGAGCCGCCGAGCAGGAACATCATGAAGCTGAACCACAGGTAGAGGGTGCCGATGTCCTTGTG
GTTGGTCGTCAGCACCCAGCGCATCAGGCCCTTGGCCGGTCCGTGGTGGTGGTCGCCGGCATGGTGGTCGGG
CGTATCGATCACAGCACTCATGGCGGTCTCCTATTGTTGTTTCTGCTTGTAGGCGACGACGTCTTTCGGGGT
GACCATGTCGCCATCGTCGTTGCCCCAGGCGTTGCGCTCGTAGGTGATCACCGCGGCCAGGTCGACCTCGTT
GAGCTGCTTGCCGAAGGCCGCCATGGCGGTGCCGGGCACGCCGTTGAAGACCACTTCCAGGTGGTGCTCCTT
GGGCCCGGTGACGATCTTCGAGCCCTTCAGCGCCGGGAACATCGGCGGCATGCCCTGGCCTTCGGCCTGGTG
GCAGGCGGCGCAGATGGTGTGGTAGACCTTGTCGCCGCGCGCGACCAGTTCTTCCTTGGTCCACTCCTTGCT
GGTCAGTTCCTTGACTTTCGCCGCCTCTTCCTTGCGCTTGGCCAGCCACTGGTCGAACTCGGCCTTGGGCTT
GACGTCGACCACGATCGGCATGAAGCCGTGGTCCTTGCCGCACAGCTCGGCGCACTGGCCGCGGTAGATGCC
GGGCTCGTCGACCTTGGTCCAGGCCTCGTTGACGAAGCCGGGGATGGCGTCGCGCTTGACCGCGAAGGCCGG
CACCCACCAGGAATGGATCACGTCGCTGGAGGTGATCAGGAAGCGCACCTTGGTGCCCACCGGCAGCACCAG
CGGCTCGTCCACCTCCAGCAGGTAATGCTCGTCCTTCGCCTGCCGGTTGTGGATCTGGTCCTGCGGGGTGGC
CAGGTTGCTGAAGTACTCGACGTCCTGGCCCAGGTACTTGTACTGCCACTTCCACTGGTAGCCGGTGACCTG
CACGTCCAGCTCCGGCTCGGAAGTGTCGTAGATGTGGATCAGGGTGCGGGTGGCGGGCACCGCCATCACCAC
CAGGATCACGAACGGCACCACCGTCCAGAGGATTTCCACCGTGGTGCTCTCGTGGAAATGCGCCGGCTGCTG
GCCGGTGGAGCGGCGGTGGACGATCATCGACCAGAACATCGCGCCGAAGACCAGCACGCCGATCACCACGCA
GATCCAGAAGATGGTCATGTGCAGGTCGAAGACGGACCGGCTCACCTCGGTAGCGCCCGGGGCCATGTTGAC
CGTCCAGGCGGCATTCGCCTGGCTGATCGCCGAGAGCAAAAGGAAGCCCATCCAGACTCGTGGATGTCGCAG
CATTCGGGTTCCCCTTATCGTTGTTTTTATCCCGCCGGCAGACGCCAACGGCCAAGGGGTGGACCGCCAAGA
CAACGAACTTTGACCGTCGCACCTCGGCACACAGCAAGGCAGGCCGGGTTCATCAGGTTCAGCATTCGAGTG
GGAGTATAG
Translation:
MARSSLDLGRGAEGVVGRRRRDAPLQALGAVPGLGRGRLAAADALDDDEQEQQLGGAEHEGADRRDHVEVGE
LQVVVGDPSRHAGEADEVHREERQVHADEAHPEVQLAEGLVVHVAGPLRQPVVGRGEDAEDRAGHQHVVEVG
DHEVGVVVLEVRRGDRQHQSGEAADGEQDDEGHGEQHRRLEGQRTLPHGGHPVEHLHPGGHRDQHGGVHEEQ
LAGDRDADHEHVVRPDHEGEEGDAGGGVDHRGVAEQRLAREGRDDRTDRTEGGQDHDVHLGVAEEPEHVLEQ
HRVAAAGGAEEAGAEVDVHQHHGHHAGQHRHHRDQQERGDQPGPDEQRHLHQGHARGAQVEDGGDHVDRAHD
RADPGQVDGEDEEGHAVRGEGGRQRRVEGPAEVGTAAGHEQGADQQAEGRRQQPEAEVVHPRQGHVRRADHQ
RDHPVGQADEGRHHRAEDHDQAVHGGHLVEERRLDDLQAGLEQLGADHHGHRAAEQEHHEAEPQVEGADVLV
VGRQHPAHQALGRSVVVVAGMVVGRIDHSTHGGLLLLFLLVGDDVFRGDHVAIVVAPGVALVGDHRGQVDLV
ELLAEGRHGGAGHAVEDHFQVVLLGPGDDLRALQRREHRRHALAFGLVAGGADGVVDLVAARDQFFLGPLLA
GQFLDFRRLFLALGQPLVELGLGLDVDHDRHEAVVLAAQLGALAAVDAGLVDLGPGLVDEAGDGVALDREGR
HPPGMDHVAGGDQEAHLGAHRQHQRLVHLQQVMLVLRLPVVDLVLRGGQVAEVLDVLAQVLVLPLPLVAGDL
HVQLRLGSVVDVDQGAGGGHRHHHQDHERHHRPEDFHRGALVEMRRLLAGGAAVDDHRPEHRAEDQHADHHA
DPEDGHVQVEDGPAHLGSARGHVDRPGGIRLADRREQKEAHPDSWMSQHSGSPYRCFYPAGRRQRPRGGPPR
QRTLTVAPRHTARQAGFIRFSIRVGV*
AnnotationID:7018GeneID:7018
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 18:06:17
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13714
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31110
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50020How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5929370Stop: 5926482
Length: 2889
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGCGCTCCTCACTTGACCTCGGGCGGGGTGCTGAAGGTGTGGTAGGGCGCCGGCGAAGGGATGCTCCA
CTCCAGGCCCTCGGCGCCGTCCCAGGGCTTGGCAGGGGCCGGCTTGCCGCCGCGGATGCACTTGATGACGAT
GAACAGGAACAGCAGCTGGGTGGTGCCGAACATGAAGGCGCCGATCGACGAGACCATGTTGAAGTCGGCGAA
CTGCAGGTTGTAGTCGGGGATCCGTCGCGGCATGCCGGCGAGGCCGACGAAGTGCATCGGGAAGAACGCCAG
GTTCATGCCGATGAAGCTCATCCAGAAGTGCAGCTTGCCGAGGGTCTCGTCGTACATGTGGCCGGTCCACTT
CGGCAGCCAGTAGTAGGCCGAGGCGAAGATGCCGAAGATCGCGCCGGGCACCAGCACGTAGTGGAAGTGGGC
GACCACGAAGTAGGTGTCGTGGTACTGGAAGTCCGCCGGGGCGATCGCCAGCATCAGTCCGGAGAAGCCGCC
GATGGTGAACAGGATGACGAAGGCCACGGCGAACAGCATCGGCGTCTCGAAGGTCAGCGAACCCTCCCACAT
GGTGGTCACCCAGTTGAACACCTTCACCCCGGTGGGCACCGCGATCAGCATGGTGGCGTACATGAAGAACAG
CTCGCCGGTGACCGGGATGCCGACCACGAACATGTGGTGCGCCCAGACCACGAAGGAGAGGAAGGCGATGCT
GGCGGTGGCGTAGACCATCGAGGTGTAGCCGAACAGCGGCTTGCGCGCGAAGGTCGGGATGATCGCACTGAC
CGCACCGAAGGCGGGCAGGATCATGATGTACACCTCGGGGTGGCCGAAGAACCAGAACACGTGCTGGAACAG
CACCGGGTCGCCGCCGCCGGCGGCGCTGAAGAAGCTGGTGCCGAAGTGGATGTCCATCAGCATCATGGTCAC
CACGCCGGCCAGCACCGGCATCACCGCGATCAACAGGAACGCGGTGATCAGCCAGGTCCAGACGAACAGCGG
CATCTTCATCAGGGTCATGCCCGGGGCGCGCAGGTTGAGGATGGTGGCGATCACGTTGATCGCGCCCATGAT
CGAGCTGATCCCGGCCAGGTGGATGGCGAAGATGAAGAAGGTCACGCTGTGCGGGGCGAAGGTGGTCGACAG
CGGCGCGTAGAAGGTCCAGCCGAAGTTGGGACCGCCGCCGGGCATGAACAGGGTGCTGACCAGCAGGCCGAA
GGCCGCCGGCAGCAGCCAGAAGCTGAAGTTGTTCATCCGCGGCAGGGCCATGTCCGGCGCGCCGATCATCAG
CGGGATCATCCAGTTGGCCAGGCCGACGAAGGCCGGCATCACCGCGCCGAAGACCATGATCAGGCCGTGCAT
GGTGGTCATCTGGTTGAAGAACGCCGGCTCGACGATCTGCAGGCCGGGCTGGAACAGCTCGGCGCGGATCAC
CATGGCCATCGAGCCGCCGAGCAGGAACATCATGAAGCTGAACCACAGGTAGAGGGTGCCGATGTCCTTGTG
GTTGGTCGTCAGCACCCAGCGCATCAGGCCCTTGGCCGGTCCGTGGTGGTGGTCGCCGGCATGGTGGTCGGG
CGTATCGATCACAGCACTCATGGCGGTCTCCTATTGTTGTTTCTGCTTGTAGGCGACGACGTCTTTCGGGGT
GACCATGTCGCCATCGTCGTTGCCCCAGGCGTTGCGCTCGTAGGTGATCACCGCGGCCAGGTCGACCTCGTT
GAGCTGCTTGCCGAAGGCCGCCATGGCGGTGCCGGGCACGCCGTTGAAGACCACTTCCAGGTGGTGCTCCTT
GGGCCCGGTGACGATCTTCGAGCCCTTCAGCGCCGGGAACATCGGCGGCATGCCCTGGCCTTCGGCCTGGTG
GCAGGCGGCGCAGATGGTGTGGTAGACCTTGTCGCCGCGCGCGACCAGTTCTTCCTTGGTCCACTCCTTGCT
GGTCAGTTCCTTGACTTTCGCCGCCTCTTCCTTGCGCTTGGCCAGCCACTGGTCGAACTCGGCCTTGGGCTT
GACGTCGACCACGATCGGCATGAAGCCGTGGTCCTTGCCGCACAGCTCGGCGCACTGGCCGCGGTAGATGCC
GGGCTCGTCGACCTTGGTCCAGGCCTCGTTGACGAAGCCGGGGATGGCGTCGCGCTTGACCGCGAAGGCCGG
CACCCACCAGGAATGGATCACGTCGCTGGAGGTGATCAGGAAGCGCACCTTGGTGCCCACCGGCAGCACCAG
CGGCTCGTCCACCTCCAGCAGGTAATGCTCGTCCTTCGCCTGCCGGTTGTGGATCTGGTCCTGCGGGGTGGC
CAGGTTGCTGAAGTACTCGACGTCCTGGCCCAGGTACTTGTACTGCCACTTCCACTGGTAGCCGGTGACCTG
CACGTCCAGCTCCGGCTCGGAAGTGTCGTAGATGTGGATCAGGGTGCGGGTGGCGGGCACCGCCATCACCAC
CAGGATCACGAACGGCACCACCGTCCAGAGGATTTCCACCGTGGTGCTCTCGTGGAAATGCGCCGGCTGCTG
GCCGGTGGAGCGGCGGTGGACGATCATCGACCAGAACATCGCGCCGAAGACCAGCACGCCGATCACCACGCA
GATCCAGAAGATGGTCATGTGCAGGTCGAAGACGGACCGGCTCACCTCGGTAGCGCCCGGGGCCATGTTGAC
CGTCCAGGCGGCATTCGCCTGGCTGATCGCCGAGAGCAAAAGGAAGCCCATCCAGACTCGTGGATGTCGCAG
CATTCGGGTTCCCCTTATCGTTGTTTTTATCCCGCCGGCAGACGCCAACGGCCAAGGGGTGGACCGCCAAGA
CAACGAACTTTGACCGTCGCACCTCGGCACACAGCAAGGCAGGCCGGGTTCATCAGGTTCAGCATTCGAGTG
GGAGTATAG