ViewGene

Locus Name:
GeneID:
Location:

GeneID:7017
TrivialName: PA14_01210
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01210
PAO1 Ortholog Locus:
Sequence Length:1626
Protein Length:541
Start: 120741
Stop: 119116
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGGCGCGGTAGGCGCGGATATTCGCCATCAGGTCGCGCCGACGCAGTTCGCCGGCGGTGCGCGCGGCGCG
CGCCAGCACCGCCGGGTCGGCGTGGCCAAGGGCGGACAGCAGCGCCGGCCCCGGGTCATGCCGGTGCATGCC
GCAGGCGGCCAGGCCAATGGCGCGGAACAGCGGCTCGGGCGAGGCCAGCAGGCGCTCCACCCAGGGCCGCGC
CTGGCCCCAGTCGAGCCAGCCGAGGGCTGCGGCGAAACCGCGCCGGGCTTCCGGAGACGCCGCAAGACAGGC
GCGCATCCGTCCGATCAACGCATCGTCTCCTGCCTGCATGGCCAGCACCGCGAGGGCGAACGCCTCGCCCTG
GGCGTGCGCGTCGAGTTGCTCGAGCAGGGCGTCATGGCCGGCCTGGCCGGCGATCGCCAGGCCGTCCAGGTG
CGCCTCGATGCGCTGATCGAGCTCGGCGAGCTCCTCCAGGTCGTAATGGGGCGCACGCACGGCGTAGTCGCG
GAGCAGGGCAAGGAAGGCGGCTTCCTCGGCGTGCTGGTCGAGCACCACGGAAGTCAGCATGGGCGCAACTCA
GGTGAGGTCATGCCAGACGCTCCCGTCGTCGCTCCAACACTGGTGCTTGCGACCGGTGGACAGGAGAATGCC
GTCGCCGGCATGCAGTTGGCCACAGGTCACCGGCCCGCAGAGGCGCATGTCCACCTGCTGCGGGACATGGTG
TGCATCGAGCCGATAAAGCGCATTGCTGGTAGCCAGGTAGATGTCGTCGTTGAAGTACTGGACGTCCCATAT
CTGCGCGTCCAGCCCGGTCTCGACGACCTTCCAGGCACTCGCCGAGCCGATCATCAGAAAGCCGTTCTTGCC
CGCCACCACCACGCGGCGGTCGGGAAGCATGTGCACCGCATTGAGGATTACATTGGTTGGGCTGTCCAAATG
CTCCCAGCGTCCATTGCCGCAACGCCACACCTCACCGGCGTAGCCCACGGCATACAGGTCCGCTTCGTCGAG
GCCATGGATAGCGTTGAAGCCGACGACATCCATCAGCTCGCGGTCCTGCAGCGTCCCCGCATCCTTTCGCTG
CCACGCGCCCGACGGGTCGCGACGGTAGACCTGACGGCCCATGCCCACCGCATAGACGCCATCGCCGATGCC
CTGCAGGTCGCGCAGGACGCCGTACACATCCGGCCCTTCACCGGCCGGCCAGATCGGCGCCTCGCTATCGCC
GTTGGCGGTGCCGTAGCCCATGTGCCCATCCGGCCCCATGTAGATCAGCTCGATGCCGCCACCACGCGGAAC
CTTCTGGATCGCCATGCGCGTGCAGTACCAAGCCAGGTTGAACGCCGCTGGCGGCGGCGACGAGAGATTCCA
CTTGATCAGGGTGGCGTTGGCCGCTCCCTGTTCGGTCAACTGATCGATCTGGGCCACCGCGCGGATCGTCGT
GCGGCTCTGCACCACGCCATGCAGATAGCTGAAATGATTTTTCTCGAACGACACTTTCTACTCCTTACAGTG
AACCGCCGGCCGCCGACATGCCGCTCATCGCCCCGATTTCCGCCTGCAGGGCAGCGGTTTGCTTGGCGTCCA
GCGTACCCACCGAGCGTGTCCCCGCCTGCGGGTCGGTCCTGA
Translation:
MGAVGADIRHQVAPTQFAGGARGARQHRRVGVAKGGQQRRPRVMPVHAAGGQANGAEQRLGRGQQALHPGPR
LAPVEPAEGCGETAPGFRRRRKTGAHPSDQRIVSCLHGQHREGERLALGVRVELLEQGVMAGLAGDRQAVQV
RLDALIELGELLQVVMGRTHGVVAEQGKEGGFLGVLVEHHGSQHGRNSGEVMPDAPVVAPTLVLATGGQENA
VAGMQLATGHRPAEAHVHLLRDMVCIEPIKRIAGSQVDVVVEVLDVPYLRVQPGLDDLPGTRRADHQKAVLA
RHHHAAVGKHVHRIEDYIGWAVQMLPASIAATPHLTGVAHGIQVRFVEAMDSVEADDIHQLAVLQRPRILSL
PRARRVATVDLTAHAHRIDAIADALQVAQDAVHIRPFTGRPDRRLAIAVGGAVAHVPIRPHVDQLDAATTRN
LLDRHARAVPSQVERRWRRRREIPLDQGGVGRSLFGQLIDLGHRADRRAALHHAMQIAEMIFLERHFLLLTV
NRRPPTCRSSPRFPPAGQRFAWRPAYPPSVSPPAGRS*
AnnotationID:7017GeneID:7017
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 18:06:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16741
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31108
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50019How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5922080Stop: 5920455
Length: 1626
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGCGCGGTAGGCGCGGATATTCGCCATCAGGTCGCGCCGACGCAGTTCGCCGGCGGTGCGCGCGGCGCG
CGCCAGCACCGCCGGGTCGGCGTGGCCAAGGGCGGACAGCAGCGCCGGCCCCGGGTCATGCCGGTGCATGCC
GCAGGCGGCCAGGCCAATGGCGCGGAACAGCGGCTCGGGCGAGGCCAGCAGGCGCTCCACCCAGGGCCGCGC
CTGGCCCCAGTCGAGCCAGCCGAGGGCTGCGGCGAAACCGCGCCGGGCTTCCGGAGACGCCGCAAGACAGGC
GCGCATCCGTCCGATCAACGCATCGTCTCCTGCCTGCATGGCCAGCACCGCGAGGGCGAACGCCTCGCCCTG
GGCGTGCGCGTCGAGTTGCTCGAGCAGGGCGTCATGGCCGGCCTGGCCGGCGATCGCCAGGCCGTCCAGGTG
CGCCTCGATGCGCTGATCGAGCTCGGCGAGCTCCTCCAGGTCGTAATGGGGCGCACGCACGGCGTAGTCGCG
GAGCAGGGCAAGGAAGGCGGCTTCCTCGGCGTGCTGGTCGAGCACCACGGAAGTCAGCATGGGCGCAACTCA
GGTGAGGTCATGCCAGACGCTCCCGTCGTCGCTCCAACACTGGTGCTTGCGACCGGTGGACAGGAGAATGCC
GTCGCCGGCATGCAGTTGGCCACAGGTCACCGGCCCGCAGAGGCGCATGTCCACCTGCTGCGGGACATGGTG
TGCATCGAGCCGATAAAGCGCATTGCTGGTAGCCAGGTAGATGTCGTCGTTGAAGTACTGGACGTCCCATAT
CTGCGCGTCCAGCCCGGTCTCGACGACCTTCCAGGCACTCGCCGAGCCGATCATCAGAAAGCCGTTCTTGCC
CGCCACCACCACGCGGCGGTCGGGAAGCATGTGCACCGCATTGAGGATTACATTGGTTGGGCTGTCCAAATG
CTCCCAGCGTCCATTGCCGCAACGCCACACCTCACCGGCGTAGCCCACGGCATACAGGTCCGCTTCGTCGAG
GCCATGGATAGCGTTGAAGCCGACGACATCCATCAGCTCGCGGTCCTGCAGCGTCCCCGCATCCTTTCGCTG
CCACGCGCCCGACGGGTCGCGACGGTAGACCTGACGGCCCATGCCCACCGCATAGACGCCATCGCCGATGCC
CTGCAGGTCGCGCAGGACGCCGTACACATCCGGCCCTTCACCGGCCGGCCAGATCGGCGCCTCGCTATCGCC
GTTGGCGGTGCCGTAGCCCATGTGCCCATCCGGCCCCATGTAGATCAGCTCGATGCCGCCACCACGCGGAAC
CTTCTGGATCGCCATGCGCGTGCAGTACCAAGCCAGGTTGAACGCCGCTGGCGGCGGCGACGAGAGATTCCA
CTTGATCAGGGTGGCGTTGGCCGCTCCCTGTTCGGTCAACTGATCGATCTGGGCCACCGCGCGGATCGTCGT
GCGGCTCTGCACCACGCCATGCAGATAGCTGAAATGATTTTTCTCGAACGACACTTTCTACTCCTTACAGTG
AACCGCCGGCCGCCGACATGCCGCTCATCGCCCCGATTTCCGCCTGCAGGGCAGCGGTTTGCTTGGCGTCCA
GCGTACCCACCGAGCGTGTCCCCGCCTGCGGGTCGGTCCTGA