ViewGene

Locus Name:
GeneID:
Location:

GeneID:6997
TrivialName: PA14_00500
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_00500
PAO1 Ortholog Locus:
Sequence Length:1734
Protein Length:577
Start: 41165
Stop: 42898
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 125/417 (29%), Positives = 147/417 (35%), Gaps = 62/417 (14%)
Sequence:
GTGCCTGCCGCTCATGGCCAGCGCCGCCCCCTTCACCTCCCCCGGCGACCGCGACCTGATCCGCGACCGCCA
GCAGCGCCTGCTGGACGAACAGCGCAAGCGCCTGGAGGAACTCCAGCAACTGCCCGGCAAGGGAGCGCCCGC
CGCTGCGGATGCCTCCGGCGACGACGAGCGCTGCTTCGAGATCCGCCGCATCGAGATGGAAGGCGCCGGGCA
CCTCGGCGAAAGCGCGCGTCGCCAACTGCTGGCGCCCTACCAGGGGCGCTGCCTGGGCGTCGGCCAGCTCAA
TGCGCTGCTCAAGGCCGTCACCGACCATTACCTGGATCGCGGCTACGTCACCACCCGCGCCTACCTGCCACA
GCAGGACCTGGCCTCCGGGACCCTGCGCATCATCGTCGTCGAAGGCCGCCTGGAGGGCCTGGACAGCTCCGC
GCTGGCCAGCCCGCGCGAACTGGCGATGAGCTTTCCGGGCAGGACCGGCGAGCTGCTCGACCTGCGCGAACT
GGAGCAACTGGTCGACCAGTTGAGTCGCCTGCCGTCGCGCCAGGCGCAACTGGAGCTAGTGCCCGGCAGCGA
GGTCGGCGGCAGTCGGGTGCGTCTCAAGGGCGAGCGCGACAAGCCCTGGCGGGTCTCCGCCACGCGCAACAA
CGACGGCGACGTCAGCACCGGCGAGCAGCAGATGGGCCTGGGTCTGGACTGGGACAGCCCGCTGGGCCTGGC
CGACCAGCTCAACCTGCGCGCCAACCGCGACGCGGTGACCGACCGCTGGCGCCATTCCGACAGCCAGAGCCT
GTTCTACAGCCTGCCCTGGGGCTGGTGGACCTTCACCTACGGCTACAGCCAGAGCGACTACCGCACGCGCAA
CGAGGCCAGCGGCTTCCCCTTCAAGCTCGATGGCGACAGCCGCAGCCACCAGTTCCGCGCCGAACGCGTGCT
GCACCGCGACGGTGTGAGCAAGACCGCCATGAGCCTGGGGCTCAGCCACCAGCGCACCAACAACTATGTCGA
AGACACCCGCCTGGAAGACCAGAGCACGCGGATCACCGAGACCCAGCTCGGCTTCAACCATGGCCGGCGGAT
CGGCAGTGGCTTCGTCAACCTCGACCTCGGCTGGCAGCAGGGCATCGGCGCCCTTGGCGCGCAGGGTCGCGG
CCACCCGCAGGCGGGCGATCCGAATGCGCGCTACGACAAGTACAGCCTGACCCTCAGCTACCTGCAGCCGTT
CCAGCTATGGGGCGAGCGCTTCAGCTTCGACAGCCTGGCCACCGGGCAGAGGAGCGAGGACGTGCTGTTCAG
CCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAG
CGGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGTGCGGTGGAATGGGCGCCGCTGCGGCCCTGGCTGCA
GGAATACGGCGTGGCCTTCGCCTACGACGTCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGG
GCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAGCGTCGGCTTCGCCCG
CTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTG
AAGACGCGGCGACCTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTT
GCTTAA
Translation:
MPAAHGQRRPLHLPRRPRPDPRPPAAPAGRTAQAPGGTPATARQGSARRCGCLRRRRALLRDPPHRDGRRRA
PRRKRASPTAGALPGALPGRRPAQCAAQGRHRPLPGSRLRHHPRLPATAGPGLRDPAHHRRRRPPGGPGQLR
AGQPARTGDELSGQDRRAARPARTGATGRPVESPAVAPGATGASARQRGRRQSGASQGRARQALAGLRHAQQ
RRRRQHRRAADGPGSGLGQPAGPGRPAQPARQPRRGDRPLAPFRQPEPVLQPALGLVDLHLRLQPERLPHAQ
RGQRLPLQARWRQPQPPVPRRTRAAPRRCEQDRHEPGAQPPAHQQLCRRHPPGRPEHADHRDPARLQPWPAD
RQWLRQPRPRLAAGHRRPWRAGSRPPAGGRSECALRQVQPDPQLPAAVPAMGRALQLRQPGHRAEERGRAVQ
PAAHQPRRQQLGARLQGPDPDRRQRRLLAQPVALAACGGMGAAAALAAGIRRGLRLRRRRDPPRPLQRRRQR
AHERQRHRTGCPRPLFRRQRRLRPLAGAAQRHRAARAPDLFPGRRVLLKTRRPPERFRKAPTCIEALSLENL
A*
AnnotationID:6998GeneID:6997
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 14:02:50
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16724
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31069
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49999How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5842502Stop: 5844235
Length: 1734
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCTGCCGCTCATGGCCAGCGCCGCCCCCTTCACCTCCCCCGGCGACCGCGACCTGATCCGCGACCGCCA
GCAGCGCCTGCTGGACGAACAGCGCAAGCGCCTGGAGGAACTCCAGCAACTGCCCGGCAAGGGAGCGCCCGC
CGCTGCGGATGCCTCCGGCGACGACGAGCGCTGCTTCGAGATCCGCCGCATCGAGATGGAAGGCGCCGGGCA
CCTCGGCGAAAGCGCGCGTCGCCAACTGCTGGCGCCCTACCAGGGGCGCTGCCTGGGCGTCGGCCAGCTCAA
TGCGCTGCTCAAGGCCGTCACCGACCATTACCTGGATCGCGGCTACGTCACCACCCGCGCCTACCTGCCACA
GCAGGACCTGGCCTCCGGGACCCTGCGCATCATCGTCGTCGAAGGCCGCCTGGAGGGCCTGGACAGCTCCGC
GCTGGCCAGCCCGCGCGAACTGGCGATGAGCTTTCCGGGCAGGACCGGCGAGCTGCTCGACCTGCGCGAACT
GGAGCAACTGGTCGACCAGTTGAGTCGCCTGCCGTCGCGCCAGGCGCAACTGGAGCTAGTGCCCGGCAGCGA
GGTCGGCGGCAGTCGGGTGCGTCTCAAGGGCGAGCGCGACAAGCCCTGGCGGGTCTCCGCCACGCGCAACAA
CGACGGCGACGTCAGCACCGGCGAGCAGCAGATGGGCCTGGGTCTGGACTGGGACAGCCCGCTGGGCCTGGC
CGACCAGCTCAACCTGCGCGCCAACCGCGACGCGGTGACCGACCGCTGGCGCCATTCCGACAGCCAGAGCCT
GTTCTACAGCCTGCCCTGGGGCTGGTGGACCTTCACCTACGGCTACAGCCAGAGCGACTACCGCACGCGCAA
CGAGGCCAGCGGCTTCCCCTTCAAGCTCGATGGCGACAGCCGCAGCCACCAGTTCCGCGCCGAACGCGTGCT
GCACCGCGACGGTGTGAGCAAGACCGCCATGAGCCTGGGGCTCAGCCACCAGCGCACCAACAACTATGTCGA
AGACACCCGCCTGGAAGACCAGAGCACGCGGATCACCGAGACCCAGCTCGGCTTCAACCATGGCCGGCGGAT
CGGCAGTGGCTTCGTCAACCTCGACCTCGGCTGGCAGCAGGGCATCGGCGCCCTTGGCGCGCAGGGTCGCGG
CCACCCGCAGGCGGGCGATCCGAATGCGCGCTACGACAAGTACAGCCTGACCCTCAGCTACCTGCAGCCGTT
CCAGCTATGGGGCGAGCGCTTCAGCTTCGACAGCCTGGCCACCGGGCAGAGGAGCGAGGACGTGCTGTTCAG
CCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAG
CGGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGTGCGGTGGAATGGGCGCCGCTGCGGCCCTGGCTGCA
GGAATACGGCGTGGCCTTCGCCTACGACGTCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGG
GCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAGCGTCGGCTTCGCCCG
CTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTG
AAGACGCGGCGACCTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTT
GCTTAA