ViewGene

Locus Name:
GeneID:
Location:

GeneID:6987
TrivialName: PA14_73380
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_73380
PAO1 Ortholog Locus:
Sequence Length:2115
Protein Length:704
Start: 6530579
Stop: 6532693
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGGCGGCCAGAGGCACGCTTCTTCAGGTGGATCAACAACAGCGAAATCGCAGCCGGCGTGACGCCGGGGAT
TCGCGAAGCCTGTCCGAGGGTTTCCGGACGGGCCTGGTTCAGCTTGTTCTGGATTTCCTTCGACAGGCCGGA
AATCCCCAGGTAATCGATATCCACAGGCAGGCGGGTATCTTCGCTGGCGCGCAGCCGGGCGATTTCCTCCTG
CTGGCGGTCGATGTAGCCGGCGTACTTGGTGCGAATCTCCACCTGCTCGGCCACCTGGGGGTTATCCACAGC
GTCGCCGGTGATCTCCACCAGGCCGGCGTAATCGATCTCGGGGCGGCTCAGCAGGTTGAGCAGGTTGTATTC
ATGGGTCAGCGGCGTACCGAAGCGCTCGGCGATGGCGTCGCCCTGCGGGGTATTCGGCCGCACCCAGGTGCT
CTTCAGCCGCTGTTCCTCGCGTTCGATACCTTCGCGCTTGGCTTCGAAGGCAGCCCAGCGCCGATCGTCGAC
AAGGCCCAGCTCGCGTCCCTTCTCGGTGAGACGCAGGTCGGCGTTGTCCTCGCGGAGGATCAGGCGGTATTC
CGCCCGCGAGGTGAACATGCGGTACGGCTCCTGGGTGCCGAGCGTGATCAGGTCGTCCACCAGCACGCCGAT
GTAGGCCTCGTCGCGGCGCGGGCACCAGCTGTCCTTGCCTTGCGAACGCAACGCAGCATTGGCGCCGGCCAG
CAGGCCCTGGGCGCCAGCTTCCTCGTAGCCGGTGGTGCCGTTGATCTGGCCGGCGAAGAACAGGCCGCCGAT
GACCTTGGTCTCCAGGCTGTACCTGAGATCGCGAGGATCGAAGAAGTCGTACTCGATCGCATAGCCCGGCCG
CACGATGTGGGCGTTTTCCATGCCACGGATGGAACGCACGATCTGCAGTTGCACGTCGAACGGCAGGGACGT
GGAAATGCCGTTGGGATACAGCTCGTGGGTCGTCAGGCCTTCCGGCTCGAGGAAGACCTGGTGGCTTTCCTT
GTCGGCGAAGCGATGGATCTTGTCTTCGATCGAAGGGCAGTAGCGCGGGCCGATGCCTTCGATCACACCGGA
ATACATCGGCGAACGATCGAGATTGGCGGCGATGATCTCGTGGGTCCGGGCGTTGGTATGGGTGATCCAGCA
ACTGACCTGCTCGGGATGCTGTTCCTTCGAACCGAGGAAGGACATCACCGGGATCGGCGTGTCGCCCGGCTG
CTCGGTCATCACCGAGAAGTCCACGCTGCGCCCGTCGATCCGCGGCGGCGTACCGGTCTTCAGCCGGCCGAC
CCGCAGCGGCAATTCACGCAGACGCCGCGCCAGTGCGATGGACGGCGGGTCGCCGGCGCGTCCGCCGGAGTA
GTTCTCCAGGCCGATGTGGATAAGTCCGCCGAGGAAGGTGCCGGTAGTCAGGACCACGTTGTCGGCATGGAA
GCGCAGTCCCATCTGGGTCACTACGCCGCGGACCTGATCCTGCTCGACGATCAGGTCGTCGCAGGCCTGCTG
GAATATCCACAGGTTCGGCTGGTTTTCCAGTGTATGGCGGATAGCGGCCTTATAGAGCACGCGATCGGCTTG
TGCACGAGTGGCGCGCACTGCCGGCCCCTTGCGGCTGTTAAGGATGCGGAACTGGATACCGCCCTTGTCGGT
GGCTTCGGCCATGGCGCCGCCAAGGGCGTCGATTTCCTTGACCAGATGGCTCTTGCCGATGCCGCCGATGGC
GGGGTTGCAGCTCATCTGCCCCAGGGTTTCCACATTGTGGGTCAACAGCAGGGTTTTCACACCCATGCGCGC
AGCCGCGAGTGCGGCTTCGGTGCCTGCATGGCCACCGCCGATCACGATTACGTCAAAACGGGTAGGGAAATC
CACCACGCACCTCGGCCTGTTCAGAAGCAGGAATTCAGGAAAGCCGGACAGTATAAGGATTTAGCGAACCTG
AATGAAGACTCCTGGACAAAAAATAGCCAATCCAGATCGAGGGAGCAAAACGGCTCGGCGGGCTTACAAAAA
ATAAAAGGAAAGGAATGTTTATATCTTTTTAGAACTTGTGTTTATTACTTAGCAGCGGCTTTTCTGTTGATA
AGTACTTCGAGCCCAGTAAAGACATAG
Translation:
MAARGTLLQVDQQQRNRSRRDAGDSRSLSEGFRTGLVQLVLDFLRQAGNPQVIDIHRQAGIFAGAQPGDFLL
LAVDVAGVLGANLHLLGHLGVIHSVAGDLHQAGVIDLGAAQQVEQVVFMGQRRTEALGDGVALRGIRPHPGA
LQPLFLAFDTFALGFEGSPAPIVDKAQLASLLGETQVGVVLAEDQAVFRPRGEHAVRLLGAERDQVVHQHAD
VGLVAARAPAVLALRTQRSIGAGQQALGASFLVAGGAVDLAGEEQAADDLGLQAVPEIARIEEVVLDRIARP
HDVGVFHATDGTHDLQLHVERQGRGNAVGIQLVGRQAFRLEEDLVAFLVGEAMDLVFDRRAVARADAFDHTG
IHRRTIEIGGDDLVGPGVGMGDPATDLLGMLFLRTEEGHHRDRRVARLLGHHREVHAAPVDPRRRTGLQPAD
PQRQFTQTPRQCDGRRVAGASAGVVLQADVDKSAEEGAGSQDHVVGMEAQSHLGHYAADLILLDDQVVAGLL
EYPQVRLVFQCMADSGLIEHAIGLCTSGAHCRPLAAVKDAELDTALVGGFGHGAAKGVDFLDQMALADAADG
GVAAHLPQGFHIVGQQQGFHTHARSRECGFGACMATADHDYVKTGREIHHAPRPVQKQEFRKAGQYKDLANL
NEDSWTKNSQSRSREQNGSAGLQKIKGKECLYLFRTCVYYLAAAFLLISTSSPVKT*
AnnotationID:6988GeneID:6987
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 09:09:52
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16717
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31050
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49989How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5794268Stop: 5796382
Length: 2115
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCGGCCAGAGGCACGCTTCTTCAGGTGGATCAACAACAGCGAAATCGCAGCCGGCGTGACGCCGGGGAT
TCGCGAAGCCTGTCCGAGGGTTTCCGGACGGGCCTGGTTCAGCTTGTTCTGGATTTCCTTCGACAGGCCGGA
AATCCCCAGGTAATCGATATCCACAGGCAGGCGGGTATCTTCGCTGGCGCGCAGCCGGGCGATTTCCTCCTG
CTGGCGGTCGATGTAGCCGGCGTACTTGGTGCGAATCTCCACCTGCTCGGCCACCTGGGGGTTATCCACAGC
GTCGCCGGTGATCTCCACCAGGCCGGCGTAATCGATCTCGGGGCGGCTCAGCAGGTTGAGCAGGTTGTATTC
ATGGGTCAGCGGCGTACCGAAGCGCTCGGCGATGGCGTCGCCCTGCGGGGTATTCGGCCGCACCCAGGTGCT
CTTCAGCCGCTGTTCCTCGCGTTCGATACCTTCGCGCTTGGCTTCGAAGGCAGCCCAGCGCCGATCGTCGAC
AAGGCCCAGCTCGCGTCCCTTCTCGGTGAGACGCAGGTCGGCGTTGTCCTCGCGGAGGATCAGGCGGTATTC
CGCCCGCGAGGTGAACATGCGGTACGGCTCCTGGGTGCCGAGCGTGATCAGGTCGTCCACCAGCACGCCGAT
GTAGGCCTCGTCGCGGCGCGGGCACCAGCTGTCCTTGCCTTGCGAACGCAACGCAGCATTGGCGCCGGCCAG
CAGGCCCTGGGCGCCAGCTTCCTCGTAGCCGGTGGTGCCGTTGATCTGGCCGGCGAAGAACAGGCCGCCGAT
GACCTTGGTCTCCAGGCTGTACCTGAGATCGCGAGGATCGAAGAAGTCGTACTCGATCGCATAGCCCGGCCG
CACGATGTGGGCGTTTTCCATGCCACGGATGGAACGCACGATCTGCAGTTGCACGTCGAACGGCAGGGACGT
GGAAATGCCGTTGGGATACAGCTCGTGGGTCGTCAGGCCTTCCGGCTCGAGGAAGACCTGGTGGCTTTCCTT
GTCGGCGAAGCGATGGATCTTGTCTTCGATCGAAGGGCAGTAGCGCGGGCCGATGCCTTCGATCACACCGGA
ATACATCGGCGAACGATCGAGATTGGCGGCGATGATCTCGTGGGTCCGGGCGTTGGTATGGGTGATCCAGCA
ACTGACCTGCTCGGGATGCTGTTCCTTCGAACCGAGGAAGGACATCACCGGGATCGGCGTGTCGCCCGGCTG
CTCGGTCATCACCGAGAAGTCCACGCTGCGCCCGTCGATCCGCGGCGGCGTACCGGTCTTCAGCCGGCCGAC
CCGCAGCGGCAATTCACGCAGACGCCGCGCCAGTGCGATGGACGGCGGGTCGCCGGCGCGTCCGCCGGAGTA
GTTCTCCAGGCCGATGTGGATAAGTCCGCCGAGGAAGGTGCCGGTAGTCAGGACCACGTTGTCGGCATGGAA
GCGCAGTCCCATCTGGGTCACTACGCCGCGGACCTGATCCTGCTCGACGATCAGGTCGTCGCAGGCCTGCTG
GAATATCCACAGGTTCGGCTGGTTTTCCAGTGTATGGCGGATAGCGGCCTTATAGAGCACGCGATCGGCTTG
TGCACGAGTGGCGCGCACTGCCGGCCCCTTGCGGCTGTTAAGGATGCGGAACTGGATACCGCCCTTGTCGGT
GGCTTCGGCCATGGCGCCGCCAAGGGCGTCGATTTCCTTGACCAGATGGCTCTTGCCGATGCCGCCGATGGC
GGGGTTGCAGCTCATCTGCCCCAGGGTTTCCACATTGTGGGTCAACAGCAGGGTTTTCACACCCATGCGCGC
AGCCGCGAGTGCGGCTTCGGTGCCTGCATGGCCACCGCCGATCACGATTACGTCAAAACGGGTAGGGAAATC
CACCACGCACCTCGGCCTGTTCAGAAGCAGGAATTCAGGAAAGCCGGACAGTATAAGGATTTAGCGAACCTG
AATGAAGACTCCTGGACAAAAAATAGCCAATCCAGATCGAGGGAGCAAAACGGCTCGGCGGGCTTACAAAAA
ATAAAAGGAAAGGAATGTTTATATCTTTTTAGAACTTGTGTTTATTACTTAGCAGCGGCTTTTCTGTTGATA
AGTACTTCGAGCCCAGTAAAGACATAG