ViewGene

Locus Name:
GeneID:
Location:

GeneID:6984
TrivialName: PA14_73210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_73210
PAO1 Ortholog Locus:
Sequence Length:2178
Protein Length:725
Start: 6519408
Stop: 6521585
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN83088.1|AE016769_203 (AE016769) Hypothetical protein [Escherichia coli CFT073]
Identities = 51/133 (38%), Positives = 66/133 (49%)
Sequence:
ATGCCCTTGTGCACTCCGGAGCGCCCCCAGGGCTCGAACCAGAAGGTTCGCGGATTCCAGTCGCGGGCACTG
GCGCCTTCGACGGGTATCCGCGGCCATTCGGGTAGCACCGCCCCGGCTATGAGCAGCCCCAGCACGATCCAT
TTCGCAGGCTTCGGCATCCGTGCCGCTCCGTTACTTCTTGATTTTTTCCGGGCGCTTCCAGTTTTCCAGGTT
CTTCTGCCGGGCGCGGCCGAAGGCCAGGTTCTTCGCCGGAACCTCATGGGTGATGGTGGAGCCGGCCGCGGT
CGTCGCGCCATCGCCAATCTTCAGCGGCGCCACCAGCGAGTTGTTCGAGCCGATGAACACATCGTCGCCCAG
CTCGGTGCGGAATTTGTTCGCGCCATCGTAGTTGCAGGTGATGGTGCCGGCGCCGATATTGCAGTTGGCGCC
CAGCTCGGCATCGCCCAGGTAGCTCAGGTGGCCGGCCTTGCTGCCCTCGCCCAGGCGGGCATTCTTCAGTTC
GACGAAGTTGCCGACATGGGCCCGAGCGCCGAGCACGCTGCCCGGACGCAGGCGGGCGAACGGACCGGCATC
GCTACCCTCGCCCAGCTCCGCGCCTTCCAGGTGGCTGTTGGCCTTGATCACCGCGCCACGCCGCAGGACGCT
GTCGCGAATCACGCAGTTCGGTCCGATGTGCACGTCGTCCTCGATCACCACGCGGCCTTCCAGCACCACGTT
GACGTCGATCAGCACGTCGCGGCCGACCGAGATTTCGCCACGGACATCCAGGCGCTGCGGATCGAGCAGGGT
CACGCCCTGGCGCATCAGCTCCTCCGCGCGCAGGCGCTGGTAGTGACGCTCCAGCTGGGCCTGTTGCATGCG
GTCATTAACACCCTGCACTTCCATCGCGTCCAGCGGTTGGGCGCTGGCTACCACCAGGCCGTCGCCGACCGC
CATGGCGATCACGTCGGTCAGGTAGTACTCGCCCTGGGCGTTGTCGTTGGACAGGCGGCCGAGCCAGTCGGC
AAGGCGCTTGCCCGGCACCGCGAGGATGCCGGTGTTGATCTCGCCGATCTGGCGCTGCGCCGGGGTCGCGTC
CTTGTGCTCGACGATGGCCTGCACCGCGCCCTGATCGTCACGGACGATGCGGCCGTAGCCGGTGGGGTCGAG
CATGTCGACGGTGAGCAGCGACAACTGGTCCGGGGTGACTTGCGCCAGCAGGCGCTGCAAGGTGTCCAGCTG
GATCAGCGGCACGTCGCCGTAGAGGATCAGCACCTGGTCTGCACTGAGGAACGGCAGGGCCTGGGCCACCGC
ATGGCCCGTACCGAGCTGTTCGGCCTGGAGCACGAAATTCAGGTCGTCGGCGGCCATCCGCTCACGCACCAG
ATCCGCGCCGTGGCCGATCACCACGTGGATCCGTTCCGGCTGCAACTGGCGCGCGCAGTCGATGACGTGGCC
GAGCATCGGCTTGCCGGCAATGGGATGGAGGACCTTGGGCAGGGCCGAACGCATGCGGGTGCCCTGGCCGGC
GGCGAGAATCACGATTTCAAGGGACATGGACTGGACTACCGTTCCTGGTGGTCACAGGCAAAACCTGTGAGT
GAAGATGCAAAACGAAAAAAGGGTAGCCCACAGGCTACCCTTTTCCCTGACACCGCTAGAAGTACCGGCTGG
AAATCAGCCGCCGAACTTCTTGCGCAGTTGCTGGACGGTGCGCAGCTGGGCTGCGGCTTCGGCCAGACGCGC
GGCAGCGGCGCTGTAGTCGAACTCGGCGCCCTTGCCCTGCAGCGCCTTTTCGGCAGCCTTCAGGGCTTCCTG
GGCGGCCGCTTCGTCGAGGTCGCCGGCACGAACCACGGTGTCGGCGAGGACCTTGACCATGTTCGGCTGGAC
TTCGAGGAAACCGCCGGAGATGTAGTACACCTCCTGCTCGCCGCCCTGCTTGACCAGGCGGATGGGGCCCGG
TTTCAGGTCGGTGATCAGCGGCGCGTGGCCCGGGGCGATACCCAGGTCACCCAGAGCGCCGTGCGCGATAAC
CATCTCGACCAGGCCGGAGAAGATCTCCGCCTCGGCGCTGACGATGTCGCAATGGACTGTTATGGCCATACG
CTTGCCTCACATGAGCGCCCGTCGCCGGGCGCACAGGATTACAGTTTTTTGGCTTTCTCGACCGCTTCTTCG
ATACCGCCGACCATGTAG
Translation:
MPLCTPERPQGSNQKVRGFQSRALAPSTGIRGHSGSTAPAMSSPSTIHFAGFGIRAAPLLLDFFRALPVFQV
LLPGAAEGQVLRRNLMGDGGAGRGRRAIANLQRRHQRVVRADEHIVAQLGAEFVRAIVVAGDGAGADIAVGA
QLGIAQVAQVAGLAALAQAGILQFDEVADMGPSAEHAARTQAGERTGIATLAQLRAFQVAVGLDHRATPQDA
VANHAVRSDVHVVLDHHAAFQHHVDVDQHVAADRDFATDIQALRIEQGHALAHQLLRAQALVVTLQLGLLHA
VINTLHFHRVQRLGAGYHQAVADRHGDHVGQVVLALGVVVGQAAEPVGKALARHREDAGVDLADLALRRGRV
LVLDDGLHRALIVTDDAAVAGGVEHVDGEQRQLVRGDLRQQALQGVQLDQRHVAVEDQHLVCTEERQGLGHR
MARTELFGLEHEIQVVGGHPLTHQIRAVADHHVDPFRLQLARAVDDVAEHRLAGNGMEDLGQGRTHAGALAG
GENHDFKGHGLDYRSWWSQAKPVSEDAKRKKGSPQATLFPDTARSTGWKSAAELLAQLLDGAQLGCGFGQTR
GSGAVVELGALALQRLFGSLQGFLGGRFVEVAGTNHGVGEDLDHVRLDFEETAGDVVHLLLAALLDQADGAR
FQVGDQRRVARGDTQVTQSAVRDNHLDQAGEDLRLGADDVAMDCYGHTLASHERPSPGAQDYSFLAFSTASS
IPPTM*
AnnotationID:6985GeneID:6984
AnnotatorUID: danlee
Modification Date/Time: 2004-02-05 17:05:33
Gene Name:
Confidence Code:4
GeneProduct:hypothetical
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13652
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31044
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49986How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5783097Stop: 5785274
Length: 2178
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCCTTGTGCACTCCGGAGCGCCCCCAGGGCTCGAACCAGAAGGTTCGCGGATTCCAGTCGCGGGCACTG
GCGCCTTCGACGGGTATCCGCGGCCATTCGGGTAGCACCGCCCCGGCTATGAGCAGCCCCAGCACGATCCAT
TTCGCAGGCTTCGGCATCCGTGCCGCTCCGTTACTTCTTGATTTTTTCCGGGCGCTTCCAGTTTTCCAGGTT
CTTCTGCCGGGCGCGGCCGAAGGCCAGGTTCTTCGCCGGAACCTCATGGGTGATGGTGGAGCCGGCCGCGGT
CGTCGCGCCATCGCCAATCTTCAGCGGCGCCACCAGCGAGTTGTTCGAGCCGATGAACACATCGTCGCCCAG
CTCGGTGCGGAATTTGTTCGCGCCATCGTAGTTGCAGGTGATGGTGCCGGCGCCGATATTGCAGTTGGCGCC
CAGCTCGGCATCGCCCAGGTAGCTCAGGTGGCCGGCCTTGCTGCCCTCGCCCAGGCGGGCATTCTTCAGTTC
GACGAAGTTGCCGACATGGGCCCGAGCGCCGAGCACGCTGCCCGGACGCAGGCGGGCGAACGGACCGGCATC
GCTACCCTCGCCCAGCTCCGCGCCTTCCAGGTGGCTGTTGGCCTTGATCACCGCGCCACGCCGCAGGACGCT
GTCGCGAATCACGCAGTTCGGTCCGATGTGCACGTCGTCCTCGATCACCACGCGGCCTTCCAGCACCACGTT
GACGTCGATCAGCACGTCGCGGCCGACCGAGATTTCGCCACGGACATCCAGGCGCTGCGGATCGAGCAGGGT
CACGCCCTGGCGCATCAGCTCCTCCGCGCGCAGGCGCTGGTAGTGACGCTCCAGCTGGGCCTGTTGCATGCG
GTCATTAACACCCTGCACTTCCATCGCGTCCAGCGGTTGGGCGCTGGCTACCACCAGGCCGTCGCCGACCGC
CATGGCGATCACGTCGGTCAGGTAGTACTCGCCCTGGGCGTTGTCGTTGGACAGGCGGCCGAGCCAGTCGGC
AAGGCGCTTGCCCGGCACCGCGAGGATGCCGGTGTTGATCTCGCCGATCTGGCGCTGCGCCGGGGTCGCGTC
CTTGTGCTCGACGATGGCCTGCACCGCGCCCTGATCGTCACGGACGATGCGGCCGTAGCCGGTGGGGTCGAG
CATGTCGACGGTGAGCAGCGACAACTGGTCCGGGGTGACTTGCGCCAGCAGGCGCTGCAAGGTGTCCAGCTG
GATCAGCGGCACGTCGCCGTAGAGGATCAGCACCTGGTCTGCACTGAGGAACGGCAGGGCCTGGGCCACCGC
ATGGCCCGTACCGAGCTGTTCGGCCTGGAGCACGAAATTCAGGTCGTCGGCGGCCATCCGCTCACGCACCAG
ATCCGCGCCGTGGCCGATCACCACGTGGATCCGTTCCGGCTGCAACTGGCGCGCGCAGTCGATGACGTGGCC
GAGCATCGGCTTGCCGGCAATGGGATGGAGGACCTTGGGCAGGGCCGAACGCATGCGGGTGCCCTGGCCGGC
GGCGAGAATCACGATTTCAAGGGACATGGACTGGACTACCGTTCCTGGTGGTCACAGGCAAAACCTGTGAGT
GAAGATGCAAAACGAAAAAAGGGTAGCCCACAGGCTACCCTTTTCCCTGACACCGCTAGAAGTACCGGCTGG
AAATCAGCCGCCGAACTTCTTGCGCAGTTGCTGGACGGTGCGCAGCTGGGCTGCGGCTTCGGCCAGACGCGC
GGCAGCGGCGCTGTAGTCGAACTCGGCGCCCTTGCCCTGCAGCGCCTTTTCGGCAGCCTTCAGGGCTTCCTG
GGCGGCCGCTTCGTCGAGGTCGCCGGCACGAACCACGGTGTCGGCGAGGACCTTGACCATGTTCGGCTGGAC
TTCGAGGAAACCGCCGGAGATGTAGTACACCTCCTGCTCGCCGCCCTGCTTGACCAGGCGGATGGGGCCCGG
TTTCAGGTCGGTGATCAGCGGCGCGTGGCCCGGGGCGATACCCAGGTCACCCAGAGCGCCGTGCGCGATAAC
CATCTCGACCAGGCCGGAGAAGATCTCCGCCTCGGCGCTGACGATGTCGCAATGGACTGTTATGGCCATACG
CTTGCCTCACATGAGCGCCCGTCGCCGGGCGCACAGGATTACAGTTTTTTGGCTTTCTCGACCGCTTCTTCG
ATACCGCCGACCATGTAG