ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6979

TrivialName: PA14_72950

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_72950

PAO1 Ortholog Locus:

Sequence Length: 1539

Protein Length: 512

Start: 6497857

Stop: 6496319

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46093.1| (X64876) orfA [Bordetella pertussis] Identities = 77/327 (23%), Positives = 113/327 (34%), Gaps = 59/327 (18%)

Sequence:

ATGCCGTGCCGTGGACCAACAGCCGGCGGGTGTGGGGAAATCGGTTGCCGCGCCAAAAAGCAGGACGGCGAC
CCGAAGGTCGCCGTCCTGTGGATAAAAAGGCCCGGAGTGTGTCGGGGCCATGAGCACGAGGCTCAATCAATC
GGTCGTGATCTTCGAGTGCTTCTGGGTGTCCTTCATGAACACATAGACCAGCAGCGAGCAGGCGATGCAGGC
GGTGACGTACCAGTAGAAGCCGCTCTCCAGGCCGACGCTCTTGAACCACAAGGCAACGTATTCGGCGGTGCC
GCCGAAGATCGACACGGTCAGGGCATACGGCAGGCCGACGCCCAGGGCGCGGATCTCGGTGGGGAACAGTTC
GGCCTTCACTACCGCGTTGATCGAGGTGTAGCCGCTGACGATCACCAGCGCCGCCATGATCAGGAAGAACGC
GCCCCACCAGCTGTCGACGCTGTGCAGGGTGCTGAGGATCGGGTAGGTGAAGACGGTGCCGAGTACGCCGAA
GGCGATCAGGATCGGCCGCCGGCCGATCTTGTCGGAGAGGGCGCCGACGATGGGCTGCAGCAGCATGAAGAG
GAACAGGGTGGCAGCCGAGATCATGGTCGAATCGGTCTTGCTCATGCCTACCGTGTTCACCAGGTACTTCTG
CATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGGCCGACCACGGTCAGCACTTCCTT
CGGGTGGCGCAGCAGGGTGCGCAGCAGGCTTTCCTTCGGCTCTTCCTTCTTCTTCGAGAAGGACTCGGTCTC
TTCCATGCCGCGACGCAGGAACATCGCCACCACTGCGCACAGCGCGCCGATGAAGAAGGGGACGCGCCAGCC
CCAGCTTTCCAGTTGTTCTACGGTCAGGGTCTGTTGCAGGACGATCAGCACCGCCAGGGCGATGAGCTGGCC
GGAAATCAGGGTCACGTACTGGAAGCTGGAGAAGAACCCGCGCTGTTCCTTGTTCGCCATCTCGCTCAGGTA
GGTGGCGGAGGTGCCGTATTCGCCGCCGACCGACAGGCCCTGGAGCAGGCGCGCGACCACCAGCAGGATCGG
CGCGGCGACGCCGATGGTTTCATAGCTGGGGGTCAGGGCGATGATCAGCGAGCCAAAGCACATCAGCAGCAC
CGAGGCCAGCAACGCCGCCTTGCGGCCCTTACGGTCGGCATAGATACCCATCAGCCAGCCACCGATCGGGCG
CATCAGGAAGCCCACGGCGAAGATAGCTGCGGTGTTCAGCAGTTGGGCGGTCATGTCGCCCTGGGGGAAGAA
TGCCTTGGCGAAGTACAGCGAGAAGGCGGCGTAGACGTACCAGTCGTACCACTCGACCAGGTTGCCGACGGA
ACCGCTGAAGATCGACTTGATGCGTTGCGAAGTGGTGCGGGGCTGGGCAGACGCGGAAATGGCGTTGGCGCT
TTCCATCGTGTTTCCTCTTTTCGTTGTTGTCTTGGATGTGCTGATCAGGGCGCAGCACACCGGCACATCGCG
AGGGCGACGTATTGGATGGCTCGATAG

Translation:

MPCRGPTAGGCGEIGCRAKKQDGDPKVAVLWIKRPGVCRGHEHEAQSIGRDLRVLLGVLHEHIDQQRAGDAG
GDVPVEAALQADALEPQGNVFGGAAEDRHGQGIRQADAQGADLGGEQFGLHYRVDRGVAADDHQRRHDQEER
APPAVDAVQGAEDRVGEDGAEYAEGDQDRPPADLVGEGADDGLQQHEEEQGGSRDHGRIGLAHAYRVHQVLL
HVGGVGVEGQGAAHGQADHGQHFLRVAQQGAQQAFLRLFLLLREGLGLFHAATQEHRHHCAQRADEEGDAPA
PAFQLFYGQGLLQDDQHRQGDELAGNQGHVLEAGEEPALFLVRHLAQVGGGGAVFAADRQALEQARDHQQDR
RGDADGFIAGGQGDDQRAKAHQQHRGQQRRLAALTVGIDTHQPATDRAHQEAHGEDSCGVQQLGGHVALGEE
CLGEVQREGGVDVPVVPLDQVADGTAEDRLDALRSGAGLGRRGNGVGAFHRVSSFRCCLGCADQGAAHRHIA
RATYWMAR*

AnnotationID:6980 GeneID:6979

AnnotatorUID: diggins

Modification Date/Time: 2005-03-22 06:06:29

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13642

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31034