ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6978

TrivialName: PA14_72910

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 19:07:51

LocusName: PA14_72910

PAO1 Ortholog Locus:

Sequence Length: 1725

Protein Length: 574

Start: 6492410

Stop: 6494134

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAB09271.1| (Z95844) PE_PGRS [Mycobacterium tuberculosis H37Rv] Identities = 84/325 (25%), Positives = 108/325 (33%), Gaps = 38/325 (11%)

Sequence:

TTGTCGGAGACGAAGCACCGACGGCGGCGCGCAGGGCCTCCAGGCAGCCTCGCGCGACGTCGGGAAGTCAGC
CGCAAAGGCACGTTGCAGAGCCTTTGCAGCGGTTCAGGTTCAGCTCTCCAGCCAGACGTCGCGAGCCCAGAC
CCACACCGAATCCCAGCTTTCATCGGTGAGGTCGCCATCGGCCCAGAGCACCACCTCGCCGTCCTCCGCCAC
GCAGTAGTAGCTGCCGTCGTCCTCGCAAAGCGGGATCAGCTCGCGCGGAACGCCCAGGTCCCAGGCAGTGGC
CGCCACTTCGGGCAGGTAGGTGTGCGAGTGCGGATCGGTCACGGTCACCGGCTCCAGGCGGCCGTAGACCAC
ATCGCTGACCAGCAGGAGGAATTCGCGGAATTCGGCGGGAATGCCGATCAGCAGCTCCTCCTCGATTTCCAC
CAGCAGTTCTTCTTCCGGCAGTTCCAGGGGCACCGGAACCGGTTCGTTGAGTTCACGCAGTTTTTCGATGAC
GTCTTCCACGACAGGCTCTCTCGCAACGGGTGGCGCGCTTTTTATACAGTAGCCGCACCGAGCGCAAGACAA
GTGTCGTGGCTGGCCTTCGGCCATGGCGCCGGACGAATGGTCGGTCAACCCGCCAACGGAAATGAAAAACCC
CCGCTCCCTGGCGGGAGCGGGAGTTTCGGCGGCCCCCGAAGGGACCGCAACCACTCGGGATCAGTTCTGCCG
GATACCGGCCACCAGCCATGGCTGGTTCTCGCCCTGGGCGCGCTCCATCCGCCAGCTTTCGCTGAAGGCTTC
GCCCTGGTCGAAGCGCGAGGTCTTCGACACACCGCTGAAGGTCAGGGTGGCGATGGTCTTGTCGGCCTGGTC
GTCGACGCCGTCCAGTTGCACGACCAGATTGTCGATGTAGGTGGACTGGTAGGCGTCGCCGATCTCGGCGCG
CTCCTGCTTCAGCCATTGCAACATCTGCGGGGTGACGAACTCGGCGATCTTGTCCATCTCGTTGGCATCCCA
ATGCTGCTGCAGGGACATGAAGTGTTCGCGAGCGGCACCGACGAAGCGCTCCTCGTTGAACCAGCTCGGCGC
GTTGATCACCGGGCTCGGCGCAACGGCGGCAGCGGCGGTGGCGCCACCGAAGATCGGCGCCTGGGCCGGCAT
TTCGCGCTGCATCGGCGCGTGCCCGGCCATCGCCGGCTGCCCCTGGTTCTGCTGGCGTCGGCGAGCGGCGAT
GAAGCGGAAGGCAATGAAGGCCACCAGGGCGATCAACAGGATATCGAGCATCTGGATGCCTTCGAAGCCGTC
GCCCATGAACATGGAGGCGAGCAGGCCGCCGGCGGCGATACCGGCCAGCGGGCCGAGCCAGCGCGAAGCACC
GCTGGCGGCAGCGGCGGGACGGGCGGCGTTGGGGGCGGCAGCAGTGGCGTTCGGCGCAGTGGCCGGCTGCGC
CTGGCGGGTCTGGTGGCTGGGTGCCGAGCCGAGGCTCTTGCCGCCGCCGAAGCGCTTGGCATTGGCATCCAG
GCTGACGGTCAGCGCCAGGCAGAAGGCGAGGGCGATGCTGAGAACACGCTGCATTGTAGTCTTTCTCTCTTG
GGGGAATCGACGCGCGTCATGTTGCGGCGGTACGGGCGGCAGGACCAGCCGGATTTTGTTTCGGGCTATTGC
TCCGCGGCCGCCGTTTTTTCGCCCGCCGCGTCTGGCTCGCGGGTCGGCGCCAGGGTACACCGTCGTTGA

Translation:

MSETKHRRRRAGPPGSLARRREVSRKGTLQSLCSGSGSALQPDVASPDPHRIPAFIGEVAIGPEHHLAVLRH
AVVAAVVLAKRDQLARNAQVPGSGRHFGQVGVRVRIGHGHRLQAAVDHIADQQEEFAEFGGNADQQLLLDFH
QQFFFRQFQGHRNRFVEFTQFFDDVFHDRLSRNGWRAFYTVAAPSARQVSWLAFGHGAGRMVGQPANGNEKP
PLPGGSGSFGGPRRDRNHSGSVLPDTGHQPWLVLALGALHPPAFAEGFALVEARGLRHTAEGQGGDGLVGLV
VDAVQLHDQIVDVGGLVGVADLGALLLQPLQHLRGDELGDLVHLVGIPMLLQGHEVFASGTDEALLVEPARR
VDHRARRNGGSGGGATEDRRLGRHFALHRRVPGHRRLPLVLLASASGDEAEGNEGHQGDQQDIEHLDAFEAV
AHEHGGEQAAGGDTGQRAEPARSTAGGSGGTGGVGGGSSGVRRSGRLRLAGLVAGCRAEALAAAEALGIGIQ
ADGQRQAEGEGDAENTLHCSLSLLGESTRVMLRRYGRQDQPDFVSGYCSAAAVFSPAASGSRVGARVHRR*

AnnotationID:6979 GeneID:6978

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 19:07:02

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hit above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16710

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31032