ViewGene

Locus Name:
GeneID:
Location:

GeneID:6969
TrivialName: PA14_72440
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_72440
PAO1 Ortholog Locus:
Sequence Length:1632
Protein Length:543
Start: 6453046
Stop: 6454677
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGTCGGAGATCGGCTGGTCGAGCACGTCGACCCGCTCGAGAGCGAGATCGGAACTGAGCAGGATGTGGTC
GAGATTGCGCTGCGGCCGCCAGCTGGGAAACGTCGCCTCGACCTGCGGCGCCATCAGGCCGAGGTCGCGCAG
GGGCGAGTTTTCCAGAAGATCGACGGCATGGGTGTTCATGTCGCCCATCAGCACCTGGTGGCGGTAGTCGCC
GATCAGCTCGCGGATATAGGCGAGCTGGCGGGTGCGGGTGCGAGCGCCGAGAGCGAGATGCATCATCACTAC
CACCAGCGCGTCGGCGCCTTCGCCAAAACGCACGAAGATCGCGCCGCGCCCCGGCGGACCGGGCAACGGATG
ATCTTCCAGCAGGGTCGGCCGCCAGCGGCTGAGCAGGCCGTTGCTGTGCTGGGCGATACGCCCGAGGTTGCG
GTTGAGCTGCTGGTACCAGTAGGGGAACGCCCCCAACTGGGCCAGGTGCTCGACCTGGTTGACGTAGCCGGA
ACGCAGGCTGCCGCCGTCGGCTTCCTGGAGGGCGACGAGATCGTAGTCGGCGAGCAGTTCGCCGATCCGCTT
CAGGTTGGTCGCCCGCCCTGCGTGGGGCAGCAGGTGCTGCCAACCGCGGGTCAGGTAGTGGCGGTAGCGCTC
GGTGCTGATACCGACCTGGATGTTGAAGCTGAGAAGGCGCAGGCGGCCGTCGTCGGGCAGCTCCCGCGAATC
GTCACAGGAGGGGTTCACTCGCGGGTCGCAGCTGCCTGCGACCCGAGGTTCACGCTGCCAGCGGCGCAACAT
GCCGAATCACCTTGCCTACTTCTTGGCCGCTGCGCGCTCTTTCTCGATCAGGTAGTCGGCCAGCTTGAGGGT
TTCCTCCGGACCACCGGCGGAGCCGATGTCGAAGCGGTATTTGCCATTGACCACCATGGTCGGTACGCCGGT
GACCTGGTAGGCCATCGCCAGCTTCTTGGCCTTTTCCATCTGGCCCTTGATGGCAAAGGAATTATAGGTGCT
CAGGAATTTTTCCTTGTCCACGCCCTTGCCGGCGAGGAAATCGGCCATCTCTTCCGGAGTGGCGAGCTTCTT
GTGCTCCTTGTGGATCGCCTCGAACACGGCGTTGTGGACGTCATGCTCGACACCCATGCTTTCCAGGGTCAG
GAACATCTGCCCATGGACGTTCCAGATACCGCCGAACAGGGCAGGCAGGCGCACGAAATGGACATCTGCCGG
CAGCTTCTCGCTCCACGGCACGATGGTCGGCTCGAACGCGTAGCAATGCGGGCAGCCATACCAGAACAGTTC
CACCACTTCGATCTTGCCCGGCTGGGACACCGGCACCGGGCTGCTCAGCTCGACGTATTCCTTGCCGGCGGT
ATAGTCGTCGGCCTGGGCGGCCATGCCGAACAGGCTGGCCATGGCCAGCATGGCGGTGAGAATCAGGTTACG
CATCGTTCACTCCTAGGCGAGGTCAGTGCCGCTCTCCGGCCGGGTTCGGCCCGGTCAGTTCGACCGGGGGGA
GCGGTCACGGGTTCCAGCATTGTAGCGATGGCGGACGCAAAAAAGGGCAGCCGAGGCCACCCTTTTTCATAC
ATCTTTTTTGCCGTGCTACGCAGCGATCAGTGCAGACCCTGGATGTAG
Translation:
MVGDRLVEHVDPLESEIGTEQDVVEIALRPPAGKRRLDLRRHQAEVAQGRVFQKIDGMGVHVAHQHLVAVVA
DQLADIGELAGAGASAESEMHHHYHQRVGAFAKTHEDRAAPRRTGQRMIFQQGRPPAAEQAVAVLGDTPEVA
VELLVPVGERPQLGQVLDLVDVAGTQAAAVGFLEGDEIVVGEQFADPLQVGRPPCVGQQVLPTAGQVVAVAL
GADTDLDVEAEKAQAAVVGQLPRIVTGGVHSRVAAACDPRFTLPAAQHAESPCLLLGRCALFLDQVVGQLEG
FLRTTGGADVEAVFAIDHHGRYAGDLVGHRQLLGLFHLALDGKGIIGAQEFFLVHALAGEEIGHLFRSGELL
VLLVDRLEHGVVDVMLDTHAFQGQEHLPMDVPDTAEQGRQAHEMDICRQLLAPRHDGRLERVAMRAAIPEQF
HHFDLARLGHRHRAAQLDVFLAGGIVVGLGGHAEQAGHGQHGGENQVTHRSLLGEVSAALRPGSARSVRPGG
AVTGSSIVAMADAKKGSRGHPFSYIFFAVLRSDQCRPWM*
AnnotationID:6970GeneID:6969
AnnotatorUID: diggins
Modification Date/Time: 2005-03-21 07:07:11
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13623
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31017
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49971How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5716735Stop: 5718366
Length: 1632
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGTCGGAGATCGGCTGGTCGAGCACGTCGACCCGCTCGAGAGCGAGATCGGAACTGAGCAGGATGTGGTC
GAGATTGCGCTGCGGCCGCCAGCTGGGAAACGTCGCCTCGACCTGCGGCGCCATCAGGCCGAGGTCGCGCAG
GGGCGAGTTTTCCAGAAGATCGACGGCATGGGTGTTCATGTCGCCCATCAGCACCTGGTGGCGGTAGTCGCC
GATCAGCTCGCGGATATAGGCGAGCTGGCGGGTGCGGGTGCGAGCGCCGAGAGCGAGATGCATCATCACTAC
CACCAGCGCGTCGGCGCCTTCGCCAAAACGCACGAAGATCGCGCCGCGCCCCGGCGGACCGGGCAACGGATG
ATCTTCCAGCAGGGTCGGCCGCCAGCGGCTGAGCAGGCCGTTGCTGTGCTGGGCGATACGCCCGAGGTTGCG
GTTGAGCTGCTGGTACCAGTAGGGGAACGCCCCCAACTGGGCCAGGTGCTCGACCTGGTTGACGTAGCCGGA
ACGCAGGCTGCCGCCGTCGGCTTCCTGGAGGGCGACGAGATCGTAGTCGGCGAGCAGTTCGCCGATCCGCTT
CAGGTTGGTCGCCCGCCCTGCGTGGGGCAGCAGGTGCTGCCAACCGCGGGTCAGGTAGTGGCGGTAGCGCTC
GGTGCTGATACCGACCTGGATGTTGAAGCTGAGAAGGCGCAGGCGGCCGTCGTCGGGCAGCTCCCGCGAATC
GTCACAGGAGGGGTTCACTCGCGGGTCGCAGCTGCCTGCGACCCGAGGTTCACGCTGCCAGCGGCGCAACAT
GCCGAATCACCTTGCCTACTTCTTGGCCGCTGCGCGCTCTTTCTCGATCAGGTAGTCGGCCAGCTTGAGGGT
TTCCTCCGGACCACCGGCGGAGCCGATGTCGAAGCGGTATTTGCCATTGACCACCATGGTCGGTACGCCGGT
GACCTGGTAGGCCATCGCCAGCTTCTTGGCCTTTTCCATCTGGCCCTTGATGGCAAAGGAATTATAGGTGCT
CAGGAATTTTTCCTTGTCCACGCCCTTGCCGGCGAGGAAATCGGCCATCTCTTCCGGAGTGGCGAGCTTCTT
GTGCTCCTTGTGGATCGCCTCGAACACGGCGTTGTGGACGTCATGCTCGACACCCATGCTTTCCAGGGTCAG
GAACATCTGCCCATGGACGTTCCAGATACCGCCGAACAGGGCAGGCAGGCGCACGAAATGGACATCTGCCGG
CAGCTTCTCGCTCCACGGCACGATGGTCGGCTCGAACGCGTAGCAATGCGGGCAGCCATACCAGAACAGTTC
CACCACTTCGATCTTGCCCGGCTGGGACACCGGCACCGGGCTGCTCAGCTCGACGTATTCCTTGCCGGCGGT
ATAGTCGTCGGCCTGGGCGGCCATGCCGAACAGGCTGGCCATGGCCAGCATGGCGGTGAGAATCAGGTTACG
CATCGTTCACTCCTAGGCGAGGTCAGTGCCGCTCTCCGGCCGGGTTCGGCCCGGTCAGTTCGACCGGGGGGA
GCGGTCACGGGTTCCAGCATTGTAGCGATGGCGGACGCAAAAAAGGGCAGCCGAGGCCACCCTTTTTCATAC
ATCTTTTTTGCCGTGCTACGCAGCGATCAGTGCAGACCCTGGATGTAG