ViewGene

Locus Name:
GeneID:
Location:

GeneID:6964
TrivialName: PA14_72240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_72240
PAO1 Ortholog Locus:
Sequence Length:1221
Protein Length:406
Start: 6438127
Stop: 6436907
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCCGTCCTCGTAGTCGGCCAGCGAGCCCCAGTAATAGTCCGCCAGCGCCGCGTTGCCCTGGGTGCTCCA
GGCCAGCCTGGCGCGCTCGGCGAATTGCACCCGCTTGAAACGCACCGGGTCCAGGCCATGCTGGCGGATGCC
GTCGAGCAACTCGCGCAGGGCGGCCTCGTTGGCGGGCAGGTCGCTGCGCTCGACATCCGCGTCGAGGCTGAA
GAAGCCCTGGTTGGCGAACACCTGGCGATCGGTCGATGGCCCGTAGGTGAGTCCGCGACGCACACGCAGGTC
GGCGTACAGCGCGTCGTTCATATAGGCCTGGAGCAGGACCATGGCGTCCGGGTCGGCGTCGTCCGGCTCCGG
ATAGATCCAGTGCAGCATCGCACCCTCGCCGAATGGCCGGGTGATCAGGGTGCGCCTGGCCTCGGCATGCCC
GTTGGCCGCCGGCAGCTCGCGGCGCTCGGGGAGCTCGTGGTCTTCCAGGGTGCCGAAGGTCCGGGTCAGATA
GGCCGGCAGGCGCGGGTCGAGGTCACCGACCAGGATCAGGGTCATGTTGCCCGGTACGTACCAGTCGCTGCG
CAGCCGCTCCAGCTGCTCCGCGCCAAGCGGCGCCAGCGGCGCGCGCTGGGAGCAGGCCAGGCCCAGTTCCAC
CGCCAGTTGGTCCATGGCGCCACGGCCCAGGTTCTCGCGGTCGAGCCAGCGCTGCAGGTGCGAGTAATGGCC
ACCGCCTTCGCGCTCGATCACCCGCTTGGCGGCGGCGATGCGCGGCTCGTCCAGTTCGGTGCGGGTGATGGT
GTCCAGCAACAGGTCGAGGACCTGCCGCTGGGTGGCGGCAGGCGCCTCGATGACGAAGGTGGTGTCGCCTTC
GCTGGTATAGGCGTTCCATTGCCCGCCGAGGGCCTGCATGCGGGCTTCCAGGTCGGCCTCATCGCCGCCGTC
CAGGCCGCTGAAGAACAGGTGCTCGAGCAGGTGCGGCAGCTGCTTTTCACGGCACGAGAAGTCGGCGAAACC
GACCCCCACCACCAGCCGGATCGAGACGTGCCGGCGCTGCTCGGTGGGCTTGAGCAGCACGCCCATGCCGTT
TTCCAGCTGGAAGGCTTCGACCTCGCTGCGCTGGTCGGCGTACGACCAGGGGCAGAGCAGGCAGAACAGCAG
CAGGGTGGACAACGAACGCATGGGCCGAGCCTGGAACTGAAAATACCGAGAATAGCGGATGCTTCATGA
Translation:
MAVLVVGQRAPVIVRQRRVALGAPGQPGALGELHPLETHRVQAMLADAVEQLAQGGLVGGQVAALDIRVEAE
EALVGEHLAIGRWPVGESATHTQVGVQRVVHIGLEQDHGVRVGVVRLRIDPVQHRTLAEWPGDQGAPGLGMP
VGRRQLAALGELVVFQGAEGPGQIGRQARVEVTDQDQGHVARYVPVAAQPLQLLRAKRRQRRALGAGQAQFH
RQLVHGATAQVLAVEPALQVRVMATAFALDHPLGGGDARLVQFGAGDGVQQQVEDLPLGGGRRLDDEGGVAF
AGIGVPLPAEGLHAGFQVGLIAAVQAAEEQVLEQVRQLLFTAREVGETDPHHQPDRDVPALLGGLEQHAHAV
FQLEGFDLAALVGVRPGAEQAEQQQGGQRTHGPSLELKIPRIADAS*
AnnotationID:6965GeneID:6964
AnnotatorUID: diggins
Modification Date/Time: 2005-03-21 06:06:37
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13614
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31007
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49966How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5701816Stop: 5700596
Length: 1221
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCCGTCCTCGTAGTCGGCCAGCGAGCCCCAGTAATAGTCCGCCAGCGCCGCGTTGCCCTGGGTGCTCCA
GGCCAGCCTGGCGCGCTCGGCGAATTGCACCCGCTTGAAACGCACCGGGTCCAGGCCATGCTGGCGGATGCC
GTCGAGCAACTCGCGCAGGGCGGCCTCGTTGGCGGGCAGGTCGCTGCGCTCGACATCCGCGTCGAGGCTGAA
GAAGCCCTGGTTGGCGAACACCTGGCGATCGGTCGATGGCCCGTAGGTGAGTCCGCGACGCACACGCAGGTC
GGCGTACAGCGCGTCGTTCATATAGGCCTGGAGCAGGACCATGGCGTCCGGGTCGGCGTCGTCCGGCTCCGG
ATAGATCCAGTGCAGCATCGCACCCTCGCCGAATGGCCGGGTGATCAGGGTGCGCCTGGCCTCGGCATGCCC
GTTGGCCGCCGGCAGCTCGCGGCGCTCGGGGAGCTCGTGGTCTTCCAGGGTGCCGAAGGTCCGGGTCAGATA
GGCCGGCAGGCGCGGGTCGAGGTCACCGACCAGGATCAGGGTCATGTTGCCCGGTACGTACCAGTCGCTGCG
CAGCCGCTCCAGCTGCTCCGCGCCAAGCGGCGCCAGCGGCGCGCGCTGGGAGCAGGCCAGGCCCAGTTCCAC
CGCCAGTTGGTCCATGGCGCCACGGCCCAGGTTCTCGCGGTCGAGCCAGCGCTGCAGGTGCGAGTAATGGCC
ACCGCCTTCGCGCTCGATCACCCGCTTGGCGGCGGCGATGCGCGGCTCGTCCAGTTCGGTGCGGGTGATGGT
GTCCAGCAACAGGTCGAGGACCTGCCGCTGGGTGGCGGCAGGCGCCTCGATGACGAAGGTGGTGTCGCCTTC
GCTGGTATAGGCGTTCCATTGCCCGCCGAGGGCCTGCATGCGGGCTTCCAGGTCGGCCTCATCGCCGCCGTC
CAGGCCGCTGAAGAACAGGTGCTCGAGCAGGTGCGGCAGCTGCTTTTCACGGCACGAGAAGTCGGCGAAACC
GACCCCCACCACCAGCCGGATCGAGACGTGCCGGCGCTGCTCGGTGGGCTTGAGCAGCACGCCCATGCCGTT
TTCCAGCTGGAAGGCTTCGACCTCGCTGCGCTGGTCGGCGTACGACCAGGGGCAGAGCAGGCAGAACAGCAG
CAGGGTGGACAACGAACGCATGGGCCGAGCCTGGAACTGAAAATACCGAGAATAGCGGATGCTTCATGA