ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6958

TrivialName: PA14_71860

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_71860

PAO1 Ortholog Locus:

Sequence Length: 2406

Protein Length: 801

Start: 6406233

Stop: 6403828

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46094.1| (X64876) orfB [Bordetella pertussis] Identities = 121/460 (26%), Positives = 163/460 (35%), Gaps = 158/460 (34%)

Sequence:

ATGTCGTCCTCCTCCGGGCCTTCTCCACGGGCTGCGCCGCTACAGGGCTTCCAGCTTGGCGTAGCCGAGCAT
CAGCCACTTGCTGCCTTCGCTCTCGAAGTTCACCTGCACCCGGGCCTGGGCGCCGGCGCCTTCGAAGTTGAG
GATAGTCCCTTCGCCGAACAGCGCGTGGCGCACCCGCTGGCCGAGGGAGAAGGGCGTCTCCGGCACCCCGGC
GCCGCTGAACAGGCTGCCGCCGGCGTTGCGCGAAGTGCCGCCGTAGGGGCGGCTGACGGTATTGGACAGGCG
CACTTCCTGGATCAGCGACGGCGGGATCTCGCGGATGAAGCGCGAAACCTTGTTGTAGGTCTCGCTACCGTA
GAGCCGGCGGGTCTCCGCGTAGGTCAGGACCAGTCGCTGCATGGCGCGGGTGACGCCGACGTAGGCCAGGCG
GCGTTCCTCTTCCAGGCGGCCGGATTCCTCCAGGCTCATCTTATGCGGGAACAGCCCTTCCTCCATGCCGAC
CAGGAACACCAGCGGGAACTCCAGGCCCTTGGCGCTGTGCAGGGTCATCAGTTGGATACTGTCCTCGTGGGC
GTCGGCCTGGGTTTCCCCGGCCTCCAGGGAGGCGTGGCTGAGGAAGGCCTGCAGCGGGGTGAGGTCTTCCTC
TTCCTCGCTGTTCTCGAAGGCGCGGGCGGCGCTGACCAGTTCCTCGAGGTTCTCCACCCGGGCCTGGCCTTT
CTCGCCTTTTTCTTCCTTGTGGTAGCTGATCAGTCCGGACTGCTCGATCACCGTCTGGGTCATCAGGTGCAG
CGGCATGTCCATGACCTTCGCCGAAAGATTCTCGATCAGCTCGACGAAGCCGGTCAGGGCGCTGGCGGCGCG
GCCGGGCAGGACCTTGTTGGCGATCATCAGGCGAATCGCCTCCCACATCGACACATCGTTGCCGCGGGCGAA
TTCGCGGATGCTCTCCACGGTCTTCTCGCCGATGCCGCGTGCCGGCACGTTGACCACCCGTTCCAGCGCCGC
GTCGTTGCCGCGGCCGTCGAGCAGGCGCAGGTAGGCCATGGCGTTCTTGATCTCGGCACGCTCGAAGAAGCG
CTGGCCGCCGTAGATGCGGTAGGGAATCTTCTCCCGCAGCAGGGCTTCCTCCAGCACCCGCGACTGGGCGTT
GGAGCGGTAGAGGATGGCGATCTCGCTGCGCGCCAGGCCGCCTCTGAGCGCGCTCTCGATCGACTCGACCAC
GTAGCGCGCCTCGTCGTGCTCGTTGAACGCGGCGTACAGGCTCAGCGACTCGCCGTCCTCGCCGTCGGTCCA
CAACTCCTTGCCCAGGCGTCCCTGGTTGTTGGCGATCAGGGCGTTGGCGGCCTTGAGGATCGACGCGGTGGA
ACGGTAGTTCTGCTCCAGGCGGATCACCTCGGCGTCGGCGAAGTCGTCGCTGAACTGTTGGATGTTCTCGAT
CCGTGCGCCACGCCAGCCGTAGATCGACTGGTCGTCGTCGCCGACCACCATCAGGCTGTCGCCGCCCTTGGC
GAGAATCCGCAGCCAGGCGTACTGCACGGCGTTGGTGTCCTGGAACTCGTCCACCAGGATATGGCGGAAGCG
CCGCTGGTAGTGCTCGAGCACGCCGGGATGGTCGCGCCAGAGGTCCAGGGCGCGCAGCAGCAGCTCGGAGAA
GTCGATCACCCCGGCGCGGGCGCAGGCCGCCTCGTAGGCTTCGTAGATCTTCAGCATGGTGGCGAGGAACAG
GTCGCCGCCGGGCTGGATGTGTTGCGGCCGCAGGCCCTCGTCCTTCTGCCCGTTGATGAACCACTGGGCCTG
GCGCGCCGGCCAGCGCTGCTCGTCGAGGCCGAGTTCGCGGATCACCCGCTTGACCAGGCGTTGCTGGTCGTC
GCTGTCGAGGATCTGGAAGTTCTCGCTCAGCCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAG
GCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATGCGGTGGCGCATCTC
CGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCA
GGCGATCCGGTGCACCAGCACGCGGGTCTTGCCCGAGCCGGCGCCGGCGAGGACCAGTTGGCGGCCCAGCGG
CGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAGCAGGAGGGAGAGGTCGTCGTTCATCGCGGC
ATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGCCT
GGCTGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAG
GCAAACCACTACAAGAACAAGCGCCTATGA

Translation:

MSSSSGPSPRAAPLQGFQLGVAEHQPLAAFALEVHLHPGLGAGAFEVEDSPFAEQRVAHPLAEGEGRLRHPG
AAEQAAAGVARSAAVGAADGIGQAHFLDQRRRDLADEARNLVVGLATVEPAGLRVGQDQSLHGAGDADVGQA
AFLFQAAGFLQAHLMREQPFLHADQEHQRELQALGAVQGHQLDTVLVGVGLGFPGLQGGVAEEGLQRGEVFL
FLAVLEGAGGADQFLEVLHPGLAFLAFFFLVVADQSGLLDHRLGHQVQRHVHDLRRKILDQLDEAGQGAGGA
AGQDLVGDHQANRLPHRHIVAAGEFADALHGLLADAACRHVDHPFQRRVVAAAVEQAQVGHGVLDLGTLEEA
LAAVDAVGNLLPQQGFLQHPRLGVGAVEDGDLAARQAASERALDRLDHVARLVVLVERGVQAQRLAVLAVGP
QLLAQASLVVGDQGVGGLEDRRGGTVVLLQADHLGVGEVVAELLDVLDPCATPAVDRLVVVADHHQAVAALG
ENPQPGVLHGVGVLELVHQDMAEAPLVVLEHAGMVAPEVQGAQQQLGEVDHPGAGAGRLVGFVDLQHGGEEQ
VAAGLDVLRPQALVLLPVDEPLGLARRPALLVEAEFADHPLDQALLVVAVEDLEVLAQPGLAPVRAQQAMGE
AVEGADPHARRIDPEQLLDAVAHLRRRLVGEGHRQDAVGRGVLDLDQPGDPVHQHAGLARAGAGEDQLAAQR
RGHGLALRVVEGVQQEGEVVVHRGILPGRGKAGQTGPPFGAGRRSVGPGCGKMLYPGLGQPAPARLCSGHFK
ANHYKNKRL*

AnnotationID:6959 GeneID:6958

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 16:04:15

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13604

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30995