ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6952

TrivialName: PA14_71730

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_71730

PAO1 Ortholog Locus:

Sequence Length: 1515

Protein Length: 504

Start: 6391222

Stop: 6392736

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM36677.1| (AE011814) filamentous haemagglutinin [Xanthomonas axonopodis pv. citri str. 306] Identities = 104/396 (26%), Positives = 140/396 (35%), Gaps = 80/396 (20%)

Sequence:

TTGGATGGTGTTGCTCATGTTCTGCTCCTTCCCTTACAGGCCGGCGTGGGCCGCGATGGCGGTGGCGATGGC
GATGGCCAGGTGCGACGGGTTGCGCTTGATCGAGTACTGGGTCAGTTCCGGGTGGCTTTCGACGAAGCTGGT
GTTGAACTGGCCGCTGCGGAATTCCGGGTTGCGGAGGATTTCCTGGTAGTACGGCGCGGTGGTCTTGACCCC
TTGCACGCGCATGTCGTCAAGGGCGCGCAGGCCGCGATCGAGGGCCTCTTCCCAGGTCAGCGCCCAGACGAT
CAGCTTCAGGCACATCGAGTCGTAGTACGGCGGGATGGTGTAGCCGGTGTAGATCGCCGTGTCGGTACGCAC
GCCGGGGCCGCCGGGGGCGTAGTAGCGGGTGATCTTGCCGAACGAGGGCAGGAAGTTGTTCTTCGGGTCCTC
GGCGTTGATGCGGAACTGCAGGGCGTAGCCGCGATGGACGATGTCGTCCTGCTTGACCGACAGCTCCAGCCC
GGAAGCGATGCGGATCTGCTCGCGGACCACGTCGATGCCGGTGATTTCCTCGGTGATGGTGTGCTCCACCTG
GACCCGGGTGTTCATCTCCATGAAGTACACCTCGCCGTCGGCGAGCAGGAACTCCACGGTGCCGGCGTTCTC
GTAGCCCACCGCCTTGGCCGCGCGCACCGCCAGATCGCCGATGTAGGCGCGCTGCTCGGGGGTGAGCTGCGG
GCTCGGGGCGATCTCGATGAGCTTCTGGTTGCGGCGCTGGATCGAGCAGTCGCGCTCGAACAGGTGCACGGT
GTTGCCGAAGGAATCGGCGAGGATCTGCGCCTCGATGTGCTTGGGATTGACGATGCACTTCTCGAGGAATAC
TTCGGCGCTGCCGAAGGCCTTGGTCGCCTCGGAGATCACCCGCGGGAACGCCTGTTCCAGCTCCTCGCGGCT
GTTGCAGCGACGGATGCCACGGCCGCCGCCGCCGGAGGTGGCCTTGAGCATCACCGGGTAGCCGATCCGCTC
GGCTTCGCGCAGGGCCTCGGCGAGATCGGCGACGTTGCCTTCGGTGCCGGGGGTGCAGGGCACGCCGGCGGC
GATCATGCTGCGGCGGGCTTCGGTCTTGTCGCCCATGCGGCGGATCACTTGCGCCGACGGGCCGATGAACTT
GATACCGCGCTCGGCGCAGATTTCCGCCAGCTCGGCATTTTCCGAGAGGAAGCCATAGCCGGGGTGCAGGGC
GTCGCAGCCGCTTTCCACCGCCAGGTTCACCAGGGCGCGCGGGTTGAGGTAGCCGGCCAGCGGGTCCGCGCC
GATGCTGTGGGCTTCGTCGGCGCGCTTGACGTGCAGCGCGTGGCGATCGGCCTCGGAGTAGACGGCCACCGA
GCGGATGCCCATCTCGGCGCAGGCGCGCACGATGCGGACGGCGATCTCGCCGCGGTTGGCGATCAGGATCTT
CTTGATCACGGAGGTCTCCCTCTTCGGGGTTGGGAACCTGGTACGGTCGATCCGGATATTCCGGTCGCTGCA
TGA

Translation:

MDGVAHVLLLPLQAGVGRDGGGDGDGQVRRVALDRVLGQFRVAFDEAGVELAAAEFRVAEDFLVVRRGGLDP
LHAHVVKGAQAAIEGLFPGQRPDDQLQAHRVVVRRDGVAGVDRRVGTHAGAAGGVVAGDLAERGQEVVLRVL
GVDAELQGVAAMDDVVLLDRQLQPGSDADLLADHVDAGDFLGDGVLHLDPGVHLHEVHLAVGEQELHGAGVL
VAHRLGRAHRQIADVGALLGGELRARGDLDELLVAALDRAVALEQVHGVAEGIGEDLRLDVLGIDDALLEEY
FGAAEGLGRLGDHPRERLFQLLAAVAATDATAAAAGGGLEHHRVADPLGFAQGLGEIGDVAFGAGGAGHAGG
DHAAAGFGLVAHAADHLRRRADELDTALGADFRQLGIFREEAIAGVQGVAAAFHRQVHQGARVEVAGQRVRA
DAVGFVGALDVQRVAIGLGVDGHRADAHLGAGAHDADGDLAAVGDQDLLDHGGLPLRGWEPGTVDPDIPVAA
*

AnnotationID:6953 GeneID:6952

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 15:03:58

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16696

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30983