ViewGene
Locus Name:
GeneID:
Location:

GeneID:6950
TrivialName: PA14_71610
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_71610
PAO1 Ortholog Locus:
Sequence Length:996
Protein Length:331
Start: 6379036
Stop: 6380031
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCTCGCCCAGGGAGGCCGCGCAGGCGTCCGGCGCCGGGTCGAGGAAAGCGAAGTTCATGCCCAGCGGGGT
TCCCGCCAGGGCCAGCATGCGGCCCAGCTGGCCGCCACCGATGACACCGATTTTCATGGTTCGAGCCTTACC
TTCTCAGAGCCTGTCTCACGCATCGCGCGGGTCGGGATTGTCCAGCACGGTTTCGGTCTGGTTGGCGCGGAA
CTGCTTCAGCGCCTCGTGGTACTGCGGGTGCTTGGCGCCGAGGATGCTCGCCGAGAGCAGCGCCGCGTTGAC
CGCGCCGGCCTTGCCGATGGCCAGGGTGGCGACCGGTACGCCGGCGGGCATCTGCACGATGGAGAGCAGCGA
GTCGACACCCGACAGCATCGACGACTGTACCGGCACGCCGAGTACCGGCAGGTGGGTCTTGGCCGCGCACAT
GCCCGGCAGGTGGGCGGCGCCGCCAGCGCCGGCGATGATCACTTCGAGGCCGCGGCCTTCGGCTTCCTCGGC
GTACTGGAAGAGCAGGTCCGGGGTGCGGTGGGCGGAAACCACCTTCACTTCGTAGGGGATGCCCAGCTTGTC
CAGCATGTCCGCGGTGTGACTGAGGGTGCTCCAGTCCGATTTGGAACCCATGATCACGCCAACCAGTGCGCT
CATCGTCGTGCCTCTCTCAAATGCGCCGTCCGGCGCGTCAGAAACCAACAAGCCACGCTTCGTCGAGGGGCG
TGGCTTGTACTGGGCCGAGCCGGCGGGCAGTGCCGGTTCGAAGGCGGCGCAGTATACCGCAAAGGCAGGCCG
GGCGCGCGCCGGGGGCTACCGTCCGTCCCGTTTTTTCGCGCCATGGCGGGAAACTTGCCGCAACTCAATGCG
CGCCTGCCACGAGCGGCCAGACTGGTTGTCGCGGCGCGCTCCGAGGGAGCGGCGGCCGCGCCGGTTCCGCAG
CCTGTCGCGGTGCCCGTCAAAGGCACCGCGACAGGCGCTCAGCCCCGTCCAAGGAGATGA
Translation:
MLAQGGRAGVRRRVEESEVHAQRGSRQGQHAAQLAATDDTDFHGSSLTFSEPVSRIARVGIVQHGFGLVGAE
LLQRLVVLRVLGAEDARREQRRVDRAGLADGQGGDRYAGGHLHDGEQRVDTRQHRRLYRHAEYRQVGLGRAH
ARQVGGAASAGDDHFEAAAFGFLGVLEEQVRGAVGGNHLHFVGDAQLVQHVRGVTEGAPVRFGTHDHANQCA
HRRASLKCAVRRVRNQQATLRRGAWLVLGRAGGQCRFEGGAVYRKGRPGARRGLPSVPFFRAMAGNLPQLNA
RLPRAARLVVAARSEGAAAAPVPQPVAVPVKGTATGAQPRPRR*
AnnotationID:6951GeneID:6950
AnnotatorUID: diggins
Modification Date/Time: 2005-03-17 14:02:54
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16692




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30979




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49952How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5642725Stop: 5643720

          
Length: 996


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCTCGCCCAGGGAGGCCGCGCAGGCGTCCGGCGCCGGGTCGAGGAAAGCGAAGTTCATGCCCAGCGGGGT 
TCCCGCCAGGGCCAGCATGCGGCCCAGCTGGCCGCCACCGATGACACCGATTTTCATGGTTCGAGCCTTACC 
TTCTCAGAGCCTGTCTCACGCATCGCGCGGGTCGGGATTGTCCAGCACGGTTTCGGTCTGGTTGGCGCGGAA 
CTGCTTCAGCGCCTCGTGGTACTGCGGGTGCTTGGCGCCGAGGATGCTCGCCGAGAGCAGCGCCGCGTTGAC 
CGCGCCGGCCTTGCCGATGGCCAGGGTGGCGACCGGTACGCCGGCGGGCATCTGCACGATGGAGAGCAGCGA 
GTCGACACCCGACAGCATCGACGACTGTACCGGCACGCCGAGTACCGGCAGGTGGGTCTTGGCCGCGCACAT 
GCCCGGCAGGTGGGCGGCGCCGCCAGCGCCGGCGATGATCACTTCGAGGCCGCGGCCTTCGGCTTCCTCGGC 
GTACTGGAAGAGCAGGTCCGGGGTGCGGTGGGCGGAAACCACCTTCACTTCGTAGGGGATGCCCAGCTTGTC 
CAGCATGTCCGCGGTGTGACTGAGGGTGCTCCAGTCCGATTTGGAACCCATGATCACGCCAACCAGTGCGCT 
CATCGTCGTGCCTCTCTCAAATGCGCCGTCCGGCGCGTCAGAAACCAACAAGCCACGCTTCGTCGAGGGGCG 
TGGCTTGTACTGGGCCGAGCCGGCGGGCAGTGCCGGTTCGAAGGCGGCGCAGTATACCGCAAAGGCAGGCCG 
GGCGCGCGCCGGGGGCTACCGTCCGTCCCGTTTTTTCGCGCCATGGCGGGAAACTTGCCGCAACTCAATGCG 
CGCCTGCCACGAGCGGCCAGACTGGTTGTCGCGGCGCGCTCCGAGGGAGCGGCGGCCGCGCCGGTTCCGCAG 
CCTGTCGCGGTGCCCGTCAAAGGCACCGCGACAGGCGCTCAGCCCCGTCCAAGGAGATGA