ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6948

TrivialName: PA14_71540

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_71540

PAO1 Ortholog Locus:

Sequence Length: 1440

Protein Length: 479

Start: 6375986

Stop: 6374547

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC18002.1| (AP005218) putative ABC transporter ATP binding protein [Corynebacterium efficiens YS-314] Identities = 55/191 (28%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Sequence:

GTGCGGGTCGATGACGAATTTCTTCGGCACCCCGGCGTCGAACTCGCCGTAGCCTTTCGGCGCATCGTCGAG
GGTGATGACTTCCACCCCGACGATGTCGGCGATCTTGATCCGGTCCCACATGATCGCCTGCATCAGCTGGCG
GTTGTACTTCATCACCGGGGTCTGGCCGGTATGGAAGCTGTGCGACTTGGCCCAGCCCAGGCCGAAGCGGAT
GCTCAGGGCGCCGTGCTTGGCGGCCGCGTCCACCGCGCCCGGGTCTTCGGTGACGTACAGGCCGGGGATGCC
GATCTTGCCGGCGACCCGGGTGATGCCCATCAGCGAGTTGAGCACGGTGGCCGGGGCTTCCTGCTGCGAGCC
CGAATGGCCGTGGCCGCGCGCCTCGAAACCGACCGCGTCGACCGCGCAGTCGACCTCCGGCTCGCCCAACAG
AGCGGCGATCTGTTCGTGCAGCGGGGTGTCCTTGGACAGGTCGGCGATCTCGAAGCCCTGTTTCTTGGCATG
GGCCAGGCGGGTCGGGTTGACGTCGCCGACGATCACCACCGCCGCGCCGAGCAGGCGTGCCGAGGCCGCCGC
GGCCAGGCCGACCGGACCGGCGCCGGCGATGTAGACCGTGCTGCCCGGGCCGACGCCGGCGGTGACCGCGCC
GTGGTAGCCGGTGGGGAGGATGTCCGAAAGGCAGGTCAGGTCGCGGATCTTCTCCATCGCCGCTTCGCGGTT
GGGCAGTTTCAGCAGGTTGAAGTCGGCGTAGGGCACCAGCACGTATTCGGCCTGGCCGCCGACCCAGCCACC
CATGTCGACGTAGCCGTAGGCGCCGCCGGCCCGCGCCGGATTGACCGTCAGGCAGACGCCGGTGTGCTGTTC
CTTGCAGGTACGGCAATGGCCGCAAGCGACGTTGAACGGTACCGAGACCAGGTCGCCGATCTTCATGGTTTC
CACGCCACGCCCGATCTCCACTACCTCGCCGGTGATCTCGTGGCCCAGCACCAGGCCTTCCGGCGCGGTGGT
GCGGCCGCGCACCATGTGCTGGTCGGAGCCGCAGATGTTGGTGGAGACCACCCGCAGGATCACCCCGTGGTC
GATCTGCCGGCCCTGCGGGTCCTGCATCTTCGGATAGGGAATGTTCTGCACCTCGACCTTGCCCGGGCCGAG
ATAGACCACACCACGATTGCCAGACATACGCGTTTCCTCTTTGTCGTTGTGGGTACAAATGCGCGGCGTCCA
CGGCCGCGCGGCTTTGCACTGGAAAGTCGTCTGTTGCGCGACAGGGCCGGAGAATGCTGGCAGCCGGCGGGC
TGTCGGTGTTGCTCGGGACGCGAGGCCGTGGGAAGCGCCCCTCTCCCTGGCACTCTTCCTTCAGCGAGGGTT
GGGGAGAGAAGGCGCGCTTACAGCACCACGGTCCGATTGGCGTTGAGGAATACCCTCCGCTCGATGTGGTAG

Translation:

MRVDDEFLRHPGVELAVAFRRIVEGDDFHPDDVGDLDPVPHDRLHQLAVVLHHRGLAGMEAVRLGPAQAEAD
AQGAVLGGRVHRARVFGDVQAGDADLAGDPGDAHQRVEHGGRGFLLRARMAVAARLETDRVDRAVDLRLAQQ
SGDLFVQRGVLGQVGDLEALFLGMGQAGRVDVADDHHRRAEQACRGRRGQADRTGAGDVDRAARADAGGDRA
VVAGGEDVRKAGQVADLLHRRFAVGQFQQVEVGVGHQHVFGLAADPATHVDVAVGAAGPRRIDRQADAGVLF
LAGTAMAASDVERYRDQVADLHGFHATPDLHYLAGDLVAQHQAFRRGGAAAHHVLVGAADVGGDHPQDHPVV
DLPALRVLHLRIGNVLHLDLARAEIDHTTIARHTRFLFVVVGTNARRPRPRGFALESRLLRDRAGECWQPAG
CRCCSGREAVGSAPLPGTLPSARVGERRRAYSTTVRLALRNTLRSMW*

AnnotationID:6949 GeneID:6948

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 14:02:01

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16689

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30975