ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6939

TrivialName: PA14_71040

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_71040

PAO1 Ortholog Locus:

Sequence Length: 1593

Protein Length: 530

Start: 6328483

Stop: 6330075

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAA26255.1| (M94085) not homologous to known sequences as of 2/92; ORF1; putative [Sinorhizobium meliloti] Identities = 39/98 (39%), Positives = 40/98 (40%), Gaps = 23/98 (23%)

Sequence:

GTGATCCTTCAACCAGGCCTTAGCGGCTTCCTCGGGTTTCTTGTTTTCGTTGAGTACCGCGTCCATCAGCTT
GTTCTCCATCTCGAGGGTGAAGCTGAGGTTCTTCAGCAGTTGGCCGACGTTGGCGCACTCCTGGGCGTAGCC
CTTGCGCACGTTGGTGTAGATGGTCGCGCCGCCATAGTTGGGGCCGAAGAAGTCGTCGCCGCCTTCCAGGTA
CTTCATCTGGAAGCGGGTATTCATGGGGTGCGGCTCCCAGCCGAGGAACACCACCCACTGGTTGCGCCGGAT
GGCCCGCTGCACCTGCGAGAGCATGCCCGCCTCGCTGGATTCCACCAACTTGAACTTGCCCAGTTCGAAGGC
GTTCTTGTCGATCATGCTCTGGGCGACGCGGTTGCCGTCGTTGCCCGGCTCGATGCCATAGATCTTGTTGCC
CAGCTTGTCGGAGAACTTCGCGATATCGGCGAAGCTGCGCAGGCCGCCGTCGTAGACGTACTGGGGAACCGC
CAGGGTGTACTTGGCGCCCTCCAGGTTGGCGCGCAGCGTCTCGACCGTGCCTTTCTCGGCGTACTGCTTGAT
GTCGTTGGTCATGGTGGGCATCCAGTTGCCCAGGAATACGTCGAGGTCGTTGTTGGCCAGGGAGCGGTAGGT
CACCGGCACCGAGAGCAGATTGACCTTGGTCTTGTAGCCGAGGGACTCGAGGACCTGGCGGGTGACCGCGGT
GGTCACTGTGATGTCGGTCCAGCCGACGTCGGCGAAACGCACCGACGCACAGGATTCGGGCTCCGCGGCCTG
GGCTGCCAGCGGTGCGCACAGAGACACGGCCAGCAGCCAAGACTTGCAACCTTTCATAGCGAACTCCTCTGC
AGGGTAAGGCGCCGGCGCTACCCCGAAGGGCGCGGCGGTCTGTCTGTATCGGGCCGACCGGTAGCGGCCCTC
AGCGGGCAATTCGTGAACGATCATGAAACAGGACGCATCCGTCGCCTACAGGGTGGGTCGCAACCAGTGCAG
GCGGGGTCGCATTCAGTACCCGCTGTGTCGCATTCAATCATAGTGGTCTTTGCCGGCGACCAGCGGATGCCG
TTTTCGGAGCGGCGCGAGCCCGTTCTCATTCCGACGCCGTGCAGGTGCAGACGCCCCTCGGCCGCAGAGGTT
CCCCGATCCGGGCGCGGACGCGGCGCTTTTGGACATGGCCGGGTCGGTGGCGGATGCGGCCCGCCCCGGGGA
AAGCCCGATGATGCGCAGGAATCGCGGGCGGAGGAGCCGCCACCCCCACTACGCAGGCACGGATGCCGCGGC
AATCCCGGAGGCCGGCATGGCTATCAGTGTGTTCGACCTTTTCAAGATCGGTATCGGCCCGTCCAGTTCGCA
TACCGTCGGCCCCATGCGCGCCGCCGCGCTGTTCACCGCTGCCCTGCGCCAACGCCAGGCGCTGTCGGCGGT
GCGGCGTCTCGAAGTGCGCCTGTACGGCTCGCTGTCCGCCACCGGCGTCGGCCACGGCACCGATCGCGCGGT
GATCATGGGCCTGATGGGCGAATGGCCGGATCGTATCGACCCGACCCAGATCGCCCCGCGCATGGCCGCGCT
GCTCGATAG

Translation:

MILQPGLSGFLGFLVFVEYRVHQLVLHLEGEAEVLQQLADVGALLGVALAHVGVDGRAAIVGAEEVVAAFQV
LHLEAGIHGVRLPAEEHHPLVAPDGPLHLREHARLAGFHQLELAQFEGVLVDHALGDAVAVVARLDAIDLVA
QLVGELRDIGEAAQAAVVDVLGNRQGVLGALQVGAQRLDRAFLGVLLDVVGHGGHPVAQEYVEVVVGQGAVG
HRHREQIDLGLVAEGLEDLAGDRGGHCDVGPADVGETHRRTGFGLRGLGCQRCAQRHGQQPRLATFHSELLC
RVRRRRYPEGRGGLSVSGRPVAALSGQFVNDHETGRIRRLQGGSQPVQAGSHSVPAVSHSIIVVFAGDQRMP
FSERREPVLIPTPCRCRRPSAAEVPRSGRGRGAFGHGRVGGGCGPPRGKPDDAQESRAEEPPPPLRRHGCRG
NPGGRHGYQCVRPFQDRYRPVQFAYRRPHARRRAVHRCPAPTPGAVGGAASRSAPVRLAVRHRRRPRHRSRG
DHGPDGRMAGSYRPDPDRPAHGRAAR*

AnnotationID:6940 GeneID:6939

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 08:08:20

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16683

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30957