ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6935

TrivialName: PA14_70840

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_70840

PAO1 Ortholog Locus:

Sequence Length: 2346

Protein Length: 781

Start: 6308630

Stop: 6310975

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG30217.1|AF296337_1 (AF296337) collagen-like surface protein [Streptococcus pyogenes] Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 14/166 (8%)

Sequence:

TTGACGGTTTCCTGTTTCTGTTTCACAGAGCTATACCTCCGCCGCTTACAACGACGCGTATTTCTTGCGCAG
ACGCTGACGGATCAGCTCTGCCAGGGTGTTCATCACGAAGGTGAACGTCAGCAGTACCAGCGCCGAGAGGAA
CAGCACGCGGTAGTGGCTGCCGCCGACCTCCGACTCGGGCATCTCCACCGCGACGTTGGCTGCCAGGGTGCG
CATGCCTTCGAAGATGTTCAGTTCCATCACCGGGGTATTGCCGGTCGCCATCAGCACGATCATGGTCTCGCC
GACGGCGCGGCCCATGCCGATCATCAGCGCCGAGAAGATGCCTGGGCTGGCGGTCAGGATCACCACGCGGGT
CAGCGTCTGCCAGGGCGTGGCGCCCAGGGCCAGGGAGCCGTAGGTAAGGCTGCGCGGCACGCTGAAGATGGC
GTCTTCGGCGATCGAGAAGATATTCGGGATCACCGCGAAGCCCATTGCCAGCCCGACGATCAGGGCATTTCG
CTGGTCGTAGGTGATGCCCAGGTCGTGGCTCAACCAGAGGCGCATGTCGCCGCCGAAGAAGGTGGTCTCCAG
GTGCGGGCTCAGCCACAGGGCGAAGGCGCCGACGGCGAGCACCACCGGGATCAGCAGCGCGGCTTCCCAGCC
GGCCGGCAGGCTCAGGCGGATACGCTCGGGCAGGCGGCTCCAGAGCAGGCCGGCGAGAAGGATGCCCAGCGG
CGTCAGCAACAGCAGGCTGAATACCCCCGGCAGGTGGCCTTCGACGTAGGGTGCCAGGAACAGGCCGGCGAA
GAAGCCGAGGATCACCGTCGGCAGCGCCTCCATCAGCTCGATCACCGGCTTGACCTTGCGGCGCATCGCCGG
AGCCATGAAATAGGCGGTGTAGACGGCGGCCGCGATGGCCAGCGGAGCTGCCAGGATCATCGCGTAGAAGGC
GGCCTTGAGCGTGCCGAAGGTCAGCGGCGAGAGGCTCAGCTTCGGTTCGAAGTCGGTGGTCGCGGCGGTGGA
CTGCCAGACGTAGGCCGGCTTGTCGTAGCTCTCGTACCAGACCTTGCCCCAGAGCGCGCTCCAGGAGATTTC
CGGGTGCGGGTTGCTCAGGGCGAAGCGGTGGATCTTGCCACCCTGCTCCAGCAGCAGGCGGTTGGCCCGCGG
CGACAGGGTGATGACCCCGGAAGAGTCGGCGACCGGCTGGACCAGCAGGGTACGGTGCGCCGTGCTGTGGAA
GACGCCGAGGTTGCCCTTCTCGTCCAGGGCGATGAAGCCCTTGCGCCGTTGTTCCGGAGCGATGGCGCTGAT
CGGCGCGCCATCCAGGTTGAAGTCGCGAACGTGCGACAGGCGCGGTTCGCCGTCGGTATCGCGAGCCATGAA
CCACTGGGCGATGCCACCCTTGGAATCGCCCACCAGCAGCGAGATGCCGCCCAACAGCTGGGTGCTCGCGGT
GACCTCGGCGTTGGGGTCTTCCAGCAGCTTGTAGCGACCGTTCAACTGGCGGCTGTGCAGGTCGAACACATC
GGCGGTGGCACGTCCGTTGATCACGTACAGCCACTGCTTGCGCGGGTCGAGGTAGATGGCTTTCACCGGTTC
GGCGATCTGCGGGAGTTCGATGCGCTCCTCGTCCAGCGTGCTTTCGCCGGTCAGCATGTTCTCTTCGCGAGT
CATGCTCAACAGCAGCAGTTGCTTGTCGACGGAGCCAGCCAGCAGCAGGCTGTCGTCGCCGGCATTGATGCT
CACATGCTCCAGCGGGCGGCCCTGCGGATCGAGACCGATCGGGGTCTCGCCGTAGGGGAAGGCGATCTCCGG
GGTGATGGTCTTCTTGTTGTCCGGGTAGGTGACCTTGTAGGTGTGCTGGAACACCAGCACCTGTCCGTTGGA
CAGGCCCAGGGCGACCGTCGGGCTGCCCGGCTGGTCTTGGGCGATCGAGCGGATCTCGCTGCCCGCCGGAAG
CGGCAGAGCGACACGCTTCAGTTCGACGCCGGTCTTGGCGTTGAAGAAGAGGATCTCGCCCTGGCCGCCAAC
GCGCATGGCCACCTGGTTCTGCTCCTCGATGCTGAGCAGCAGGGGCACCTGCGCCTGCTGCATCCAGGCCGG
AGTCAGCGCTTCGCGGGTCTCCAGGTCGGCGCCGCGGAACAGCGGGAGCACGACGTAGGCCAGGTAGAAGAA
GATCAGGGTGATCGCCGCCAGCACGGCCAGGCCGCCGACCAGCACGTACCAGCGGGTCAGGCGGTCCTTGAG
GGCACGGATGCGGCGCTTGCGTTGCAGGGCTGGCGTATTGAAGTCAATCCGCTCGGGAGCAAGGGAGGAGTT
CATCGGGGAGTTGGCCATGTCGTTCATGGGGTGACACCCTAA

Translation:

MTVSCFCFTELYLRRLQRRVFLAQTLTDQLCQGVHHEGERQQYQRREEQHAVVAAADLRLGHLHRDVGCQGA
HAFEDVQFHHRGIAGRHQHDHGLADGAAHADHQRREDAWAGGQDHHAGQRLPGRGAQGQGAVGKAARHAEDG
VFGDREDIRDHREAHCQPDDQGISLVVGDAQVVAQPEAHVAAEEGGLQVRAQPQGEGADGEHHRDQQRGFPA
GRQAQADTLGQAAPEQAGEKDAQRRQQQQAEYPRQVAFDVGCQEQAGEEAEDHRRQRLHQLDHRLDLAAHRR
SHEIGGVDGGRDGQRSCQDHRVEGGLERAEGQRREAQLRFEVGGRGGGLPDVGRLVVALVPDLAPERAPGDF
RVRVAQGEAVDLATLLQQQAVGPRRQGDDPGRVGDRLDQQGTVRRAVEDAEVALLVQGDEALAPLFRSDGAD
RRAIQVEVANVRQARFAVGIASHEPLGDATLGIAHQQRDAAQQLGARGDLGVGVFQQLVATVQLAAVQVEHI
GGGTSVDHVQPLLARVEVDGFHRFGDLREFDALLVQRAFAGQHVLFASHAQQQQLLVDGASQQQAVVAGIDA
HMLQRAALRIETDRGLAVGEGDLRGDGLLVVRVGDLVGVLEHQHLSVGQAQGDRRAARLVLGDRADLAARRK
RQSDTLQFDAGLGVEEEDLALAANAHGHLVLLLDAEQQGHLRLLHPGRSQRFAGLQVGAAEQREHDVGQVEE
DQGDRRQHGQAADQHVPAGQAVLEGTDAALALQGWRIEVNPLGSKGGVHRGVGHVVHGVTP*

AnnotationID:6936 GeneID:6935

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 07:07:42

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16677

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30949