ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6934

TrivialName: PA14_70820

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_70820

PAO1 Ortholog Locus:

Sequence Length: 1788

Protein Length: 595

Start: 6306958

Stop: 6308745

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC49570.1| (AP005950) ribonuclease E [Bradyrhizobium japonicum USDA 110] Identities = 74/308 (24%), Positives = 105/308 (34%), Gaps = 58/308 (18%)

Sequence:

TTGCATGGGAAGCTCCCTCAATCAGTTTTCCAGGGCCTTGTACTTCTCGCGCAGGCGATTGCGGATCGCGAT
GGCGGAGAAGTTCAGCAGGGCGATCACCACGACCAGCAGCAACGCCGTAGCGTATACCAGCGGCCGTGCGGC
CTCGACGTTGGGGCTCTGGAAACCGACGTCGTAGATATGGAAACCGAGGTGCATGATCTTCTGGTCGAGATG
CACGTACGGATAGTTACCGTCGACCGGCAGCGACGGTGCCAGTTTCACCACGCCGACCAGCATCAGCGGCGC
CACTTCGCCGGCGGCACGAGCCACGGCGAGGATCAGGCCGGTCATCATCGCCGGGCTGGCCATCGGCAGGAC
GATCTTCCACAGCGTTTCCGCCTTGGTCGCGCCGAGCGCCAGGGAGCCTTCGCGGACCGCGCGCGGAATCCG
CGCCAGGCCTTCCTCGGTGGCGACGATCACCACCGGCACGGCGAGGATCGCCAGGGTCAGCGAGGCCCAGAA
CAGTCCGGGGGTACCGAAGGTCGGCGCCGGCAGGGCCTCGGGGAAGAACAGCCGGTCGATGGAACCGCCCAG
CACGTAGACGAAGAAGCCCAGGCCGAACACGCCGTAGACGATCGCCGGTACGCCGGCGAGGTTGTTCACGGC
GATGCGGATCACCCGGGTCAGCGGCCCCTGCTTGGCGTACTCGCGCAGGTAGACCGCAGCGATCACGCCGAA
CGGGGTGACGATCAGCGCCATCACCAGGGTCATCATCACGGTGCCGAAGATCGCCGGGAAGATACCGCCCTC
GGTATTGGCCTCGCGCGGATCGTCGCTGAGGAACTCCCAGAGCTTCTTGAAGTACACCGTCATCTTGGTGCC
CAGGCCCATGGCGTTGGGCTGGTAGGCATGCACCAGCTTGCCAAGGGTGATTTCGCTCTCGCGGCCGCTGGC
GTCGCGCATTACCACGCTGTCGCGGTTGAACTCCTGGTGCAGGCCGTTGAGCTGCTCTTCCAGGACCTTGTA
GCGCGCCTGCAACTCGCTGCGCTCGGCGGCCAGGTCGGCCTGGGCGGCGGCGTCCAGCTTGCCGTCCAACTG
CAACTTGCGCTCTTTCAGGCGCAGGCGCTCGAGACCGTGGTTGATCCCGCCGATGTCGCCCTTCTCCAGCTT
GTAGAGCTTGGCGTAGAGGTCATCCACCCGCTGCATGCGCTTCTGCAGTTCGCCTACCGCGGCGTCGCCTTC
GGCGACCACCTGGCCGTTCTCCTTGACGCTCAGCAGGTAGCCGTAGAAGTTGCCCCACTCGCGGCGTTCGAG
AACCATCAGCGCTTCGGGACGCTTGATGTCCTGCAGCCACTCGCCGACGACCCAGGAGAAATCGCTGCCGTA
AAGCTCGCGGTTGCCCAGCTTGAGCAGCTCGCGGGTCATGAATTCGGGGCCGGCCTCCGGGACCGGCATGCC
GGCGCTGCGCAGGCGCGCGCGCGGCACTTCCTCGGCCTGGACCACCTCGCCGATCACGGTCTTGGCGGCTTC
GCCAGGGATCTGGTAAGTCGCCTCGATGACGTTCGCCGGCCAGAAGTGGCCGAGGCCGCGTACCGCGATCAC
CGCCAGCAGGCCGATGGTCATGATCACCGCGATCGACACCGCGCCGGCGTTCATCCACACCCAGGGCGAGCC
GCTGCCGAACCAGGCTTTGACGGTTTCCTGTTTCTGTTTCACAGAGCTATACCTCCGCCGCTTACAACGACG
CGTATTTCTTGCGCAGACGCTGACGGATCAGCTCTGCCAGGGTGTTCATCACGAAGGTGA

Translation:

MHGKLPQSVFQGLVLLAQAIADRDGGEVQQGDHHDQQQRRSVYQRPCGLDVGALETDVVDMETEVHDLLVEM
HVRIVTVDRQRRCQFHHADQHQRRHFAGGTSHGEDQAGHHRRAGHRQDDLPQRFRLGRAERQGAFADRARNP
RQAFLGGDDHHRHGEDRQGQRGPEQSGGTEGRRRQGLGEEQPVDGTAQHVDEEAQAEHAVDDRRYAGEVVHG
DADHPGQRPLLGVLAQVDRSDHAERGDDQRHHQGHHHGAEDRREDTALGIGLARIVAEELPELLEVHRHLGA
QAHGVGLVGMHQLAKGDFALAAAGVAHYHAVAVELLVQAVELLFQDLVARLQLAALGGQVGLGGGVQLAVQL
QLALFQAQALETVVDPADVALLQLVELGVEVIHPLHALLQFAYRGVAFGDHLAVLLDAQQVAVEVAPLAAFE
NHQRFGTLDVLQPLADDPGEIAAVKLAVAQLEQLAGHEFGAGLRDRHAGAAQARARHFLGLDHLADHGLGGF
ARDLVSRLDDVRRPEVAEAAYRDHRQQADGHDHRDRHRAGVHPHPGRAAAEPGFDGFLFLFHRAIPPPLTTT
RISCADADGSALPGCSSRR*

AnnotationID:6935 GeneID:6934

AnnotatorUID: diggins

Modification Date/Time: 2005-03-17 07:07:03

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16675

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30947