ViewGene

Locus Name:
GeneID:
Location:

GeneID:6933
TrivialName: PA14_70700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70700
PAO1 Ortholog Locus:
Sequence Length:1593
Protein Length:530
Start: 6295194
Stop: 6296786
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCAGGGTGGGCACGTTCTTGCCGGGATTGAGCAGCCCGGCCGGGTCGAACGCCGCCTTCACGGCGTGGAA
CAGGGTCAGCTCGTCGGCATTGAACTGAGCGCACATCTGGTTGATCTTCTCGCGGCCGACGCCATGTTCGCC
GGTGATGCTGCCGCCTACCGCCACGCACAACTCGAGGATCCTGCCGCCCAGCGCTTCGGCGCGCTCCAGCTC
GCCCGGCAGGTTGGCGTCGAAGAGGATCAGCGGGTGCATGTTGCCGTCGCCGGCGTGGAATACGTTGGCCAC
CCGCAGGCCGTATTCGCGCGAAAGCTCGGCGATGCCATGCAGCACCCGCGGCAGCTCGCGGCGCGGGATGCT
GCCGTCCATGCAGTAGTAATCGGGGGAAATCCGCCCGACCGCCGGAAACGCATTCTTGCGCCCGGCCCAGAA
GCGCTGGCGCTCGGCCTCGTCTTGGGCCTGTCGCACCGATGTGGCGCCAGCCGCCTCGAACAGCTCGCGGAC
CCGCTCGCAATCCTCGTGCACGTCGGCTTCCACGCCATCCAGTTCGCAGAGCAGGATCGCCGCCGCGTCGAC
CGGATAGCCGGCATGGATGAAGTCCTCGGCGGCGCGGATCGACAGGTTGTCCATCATTTCCAGCCCGGCCGG
GACGATGCCGGCACCGATCAGGTCGGCCACCGCCCGCCCGGCGCTTTCCACATCGTCGAAGCTGGCCAGCAG
GACCTTCGCCACCGGCGGGCGCGGCAACAGCCTGACGGTGACCTCCACCACCACGCCGAGCAGCCCTTCGGA
GCCGGTGAACAGCGCCAGCAGGTCGAAGCCGGCGCTGTCCAGGGCGCTGGACCCCAGGCTCAGGCGCTCGCC
TTCCAGGGTCACGATGTCCACCTGCAACAGGTTGTGCACGGTCAGGCCGTACTTCAGGCAATGCACGCCGCC
GGCGTTCTCCGCGACATTGCCGCCGATGGAGCAGGCGATCTGCGAGGACGGGTCCGGTGCGTAGTACAGACC
ATGAGGGGCAGCGGCCTGGGAGATCGCCAGGTTGCGCACGCCAGGCTGGACCCGGGCGAAACGACCCAGCGG
ATCGATCTCGAGGATCCGCCGGAAACGCGCCATCACCAGCAGCACGCCGTTCTCCAGCGGCAGCGCGCCGCC
GGACAGGCCGGTGCCGGCACCGCGCGCCACGACCGGCACCTTCAGCCGATGGCAGAGGGCGAGCAGGCCCTG
AACCTGTTCGATGCGTTCCGGCAATGCCACCAGCAACGGCGTGCAGCGATACGCCGAGAGTCCGTCGCACTC
GTAGGGACGCAGGTCTTCCGCGGCGTGCAGCAGTTCGAGGTCGGGCAGGCGGAGGCGCAACTCGGCCAGCAG
GCCATCCTTGTCCACCTGCGGCAGCGGACCGTCCAGACGCTCGTCGTAGAGGATGTTCATGGCGGCTGTCCT
TGTTGTGGTTGTCGGCGGGATCAGCAAGCGTCCACAGCCTGTACCGCGCGGACGCCAGGGTCCAGCAGGCGT
CTAACTGGTCCTACCAGTATCACCAGGAGCCATGGGCATGAGGCGCATGCTAGAAAGTCCCTGAGCTTCTAT
AGTGAGTAA
Translation:
MQGGHVLAGIEQPGRVERRLHGVEQGQLVGIELSAHLVDLLAADAMFAGDAAAYRHAQLEDPAAQRFGALQL
ARQVGVEEDQRVHVAVAGVEYVGHPQAVFARKLGDAMQHPRQLAARDAAVHAVVIGGNPPDRRKRILAPGPE
ALALGLVLGLSHRCGASRLEQLADPLAILVHVGFHAIQFAEQDRRRVDRIAGMDEVLGGADRQVVHHFQPGR
DDAGTDQVGHRPPGAFHIVEAGQQDLRHRRARQQPDGDLHHHAEQPFGAGEQRQQVEAGAVQGAGPQAQALA
FQGHDVHLQQVVHGQAVLQAMHAAGVLRDIAADGAGDLRGRVRCVVQTMRGSGLGDRQVAHARLDPGETTQR
IDLEDPPETRHHQQHAVLQRQRAAGQAGAGTARHDRHLQPMAEGEQALNLFDAFRQCHQQRRAAIRRESVAL
VGTQVFRGVQQFEVGQAEAQLGQQAILVHLRQRTVQTLVVEDVHGGCPCCGCRRDQQASTACTARTPGSSRR
LTGPTSITRSHGHEAHARKSLSFYSE*
AnnotationID:6934GeneID:6933
AnnotatorUID: diggins
Modification Date/Time: 2005-03-17 07:07:53
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13557
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30945
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49935How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5558883Stop: 5560475
Length: 1593
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: psyr_15may02_Scaffold9_revised_gene8013Homolog Bit Score 119.0
Other Homologs: psyr_15may02_Scaffold9_revised_gene8013 (BLASTP 119)
GC ORF Sequence
ATGCAGGGTGGGCACGTTCTTGCCGGGATTGAGCAGCCCGGCCGGGTCGAACGCCGCCTTCACGGCGTGGAA
CAGGGTCAGCTCGTCGGCATTGAACTGAGCGCACATCTGGTTGATCTTCTCGCGGCCGACGCCATGTTCGCC
GGTGATGCTGCCGCCTACCGCCACGCACAACTCGAGGATCCTGCCGCCCAGCGCTTCGGCGCGCTCCAGCTC
GCCCGGCAGGTTGGCGTCGAAGAGGATCAGCGGGTGCATGTTGCCGTCGCCGGCGTGGAATACGTTGGCCAC
CCGCAGGCCGTATTCGCGCGAAAGCTCGGCGATGCCATGCAGCACCCGCGGCAGCTCGCGGCGCGGGATGCT
GCCGTCCATGCAGTAGTAATCGGGGGAAATCCGCCCGACCGCCGGAAACGCATTCTTGCGCCCGGCCCAGAA
GCGCTGGCGCTCGGCCTCGTCTTGGGCCTGTCGCACCGATGTGGCGCCAGCCGCCTCGAACAGCTCGCGGAC
CCGCTCGCAATCCTCGTGCACGTCGGCTTCCACGCCATCCAGTTCGCAGAGCAGGATCGCCGCCGCGTCGAC
CGGATAGCCGGCATGGATGAAGTCCTCGGCGGCGCGGATCGACAGGTTGTCCATCATTTCCAGCCCGGCCGG
GACGATGCCGGCACCGATCAGGTCGGCCACCGCCCGCCCGGCGCTTTCCACATCGTCGAAGCTGGCCAGCAG
GACCTTCGCCACCGGCGGGCGCGGCAACAGCCTGACGGTGACCTCCACCACCACGCCGAGCAGCCCTTCGGA
GCCGGTGAACAGCGCCAGCAGGTCGAAGCCGGCGCTGTCCAGGGCGCTGGACCCCAGGCTCAGGCGCTCGCC
TTCCAGGGTCACGATGTCCACCTGCAACAGGTTGTGCACGGTCAGGCCGTACTTCAGGCAATGCACGCCGCC
GGCGTTCTCCGCGACATTGCCGCCGATGGAGCAGGCGATCTGCGAGGACGGGTCCGGTGCGTAGTACAGACC
ATGAGGGGCAGCGGCCTGGGAGATCGCCAGGTTGCGCACGCCAGGCTGGACCCGGGCGAAACGACCCAGCGG
ATCGATCTCGAGGATCCGCCGGAAACGCGCCATCACCAGCAGCACGCCGTTCTCCAGCGGCAGCGCGCCGCC
GGACAGGCCGGTGCCGGCACCGCGCGCCACGACCGGCACCTTCAGCCGATGGCAGAGGGCGAGCAGGCCCTG
AACCTGTTCGATGCGTTCCGGCAATGCCACCAGCAACGGCGTGCAGCGATACGCCGAGAGTCCGTCGCACTC
GTAGGGACGCAGGTCTTCCGCGGCGTGCAGCAGTTCGAGGTCGGGCAGGCGGAGGCGCAACTCGGCCAGCAG
GCCATCCTTGTCCACCTGCGGCAGCGGACCGTCCAGACGCTCGTCGTAGAGGATGTTCATGGCGGCTGTCCT
TGTTGTGGTTGTCGGCGGGATCAGCAAGCGTCCACAGCCTGTACCGCGCGGACGCCAGGGTCCAGCAGGCGT
CTAACTGGTCCTACCAGTATCACCAGGAGCCATGGGCATGAGGCGCATGCTAGAAAGTCCCTGAGCTTCTAT
AGTGAGTAA