ViewGene

Locus Name:
GeneID:
Location:

GeneID:6932
TrivialName: PA14_70660
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70660
PAO1 Ortholog Locus:
Sequence Length:1431
Protein Length:476
Start: 6292708
Stop: 6294138
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCTCACCGCCCAGCCTTGGCGCTGTGCCTCCTCGCGGGCCGCGCCAAGGACGCGGGCGACCTCCTCGCGG
CCGAGTACCGGCTTGCTGTGCATGGTTTCACTCTCCTCCGGGCAAGGCCTGGTCGAGCAGCTCGATCCAGTG
GCGTACCGGGGTCCGTCCGGCCCCGTCGAGATGGGCCTGGCAACCGACGTTGGCCGTGGCGATGACATCCGG
CGCGCCGCTTTCCAGGGCGTCCAGGCGGTTGTCGCGCAGACGCCGGGACAGCGCCGGCTGGGTCAGCGAGTA
GGTGCCGGCGGAGCCGCAGCAGAGATGACCGTCGGCCACCTCGGTGAGATGGAAGCCCAGTCGCCGCAGCAC
CGCCTCCACGGCCCCGCCCAGTCGTTGCGCGTGCTGCAGTGTGCATGGGCAGTGGAATGCCAGGCGCTGGTC
GCAGCGCAGGCCGAGGGACTCCAGCGGCTCGTCGCGAAGCACTTCCACCAGGTCGCGGGCAGCGGCGGCGAC
CTCGCGCGCCTTGTCCGCGTACCGTGGGTCGTCGCGCAGCAGGTAGGCGTAGTCCTTGACGAAGGCGCCGCA
GCCGCTGGCGGTCTGCACGATGGCCTCGGCACCCTCGCGCAGCAACGGCCACCAGGCGTCGATATTGCGCCG
CGCGCGCTGGCGGCCGCGCTCCTGCGCATCCAGGTGGAAATCCAGCGCGCCGCAGCAGCCGGCCGCGGCCGC
CGGCGTCACGCTGATTCCCAGGCGGTCCAGAACCCGCGCGGCGGCGGCGTTGGTATTCGGCGACAGCGCCGG
CTGCACGCAACCTTCGAGCAGCAGCACGCGCCGCGCATGCCGGGGCTGCGGCCGCCTGCCCGGCGCCGCGAC
CCGACGTGGCAGCTTGCCCTGCATCGCCTCAGGCAGCAGAGGCCTCAGCCGCCCGGCAGCGCCGGCCAGCAC
GCCGAACAACCCCGGGCGCGGGGCCAGCAGGCGCAGCACGTCGCGCAGCAGGCGTTGCCGGAAGCCGCGCGG
CAGGCGTTCGGCGAGGAGGTCGCGGCCGATATCCAGCAGCTTGTGGTACTCGACTCCGGATGGGCAGGTGGT
TTCGCAGTTGCGGCAGCTCAGGCAGCGATCGAGGTGCAGGCGGGTGCGCTCGCTGGCCTCGTCGCGCTCGAG
GAACTGCTTGATCAGGTAGATCCGTCCGCGCGGGCCGTCGAGTTCGTCGCCCAGCTCCTGGTAGGTCGGGCA
GGTGGCGTTGCAGAAACCGCAGTGCACGCAGCTGCGCAGGATGCGCTCGGCTTCGGCGGCCTCGGCGCGTTG
CCGGGCGGAATCGCAGAGGTTGGTTTGCATCGCGCCTCCTCAGAGTTCGGCGTACATCCGCCCGGGATTGAA
GATGCCCTGCGGGTCGAGCTGGCGTTTGAGTGCCCGGTGCAGGTCGAGCAGTCCAGGCGGTAG
Translation:
MLTAQPWRCASSRAAPRTRATSSRPSTGLLCMVSLSSGQGLVEQLDPVAYRGPSGPVEMGLATDVGRGDDIR
RAAFQGVQAVVAQTPGQRRLGQRVGAGGAAAEMTVGHLGEMEAQSPQHRLHGPAQSLRVLQCAWAVECQALV
AAQAEGLQRLVAKHFHQVAGSGGDLARLVRVPWVVAQQVGVVLDEGAAAAGGLHDGLGTLAQQRPPGVDIAP
RALAAALLRIQVEIQRAAAAGRGRRRHADSQAVQNPRGGGVGIRRQRRLHATFEQQHAPRMPGLRPPARRRD
PTWQLALHRLRQQRPQPPGSAGQHAEQPRARGQQAQHVAQQALPEAARQAFGEEVAADIQQLVVLDSGWAGG
FAVAAAQAAIEVQAGALAGLVALEELLDQVDPSARAVEFVAQLLVGRAGGVAETAVHAAAQDALGFGGLGAL
PGGIAEVGLHRASSEFGVHPPGIEDALRVELAFECPVQVEQSRR*
AnnotationID:6933GeneID:6932
AnnotatorUID: diggins
Modification Date/Time: 2005-03-17 06:06:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13556
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30943
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49934How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5556397Stop: 5557827
Length: 1431
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTCACCGCCCAGCCTTGGCGCTGTGCCTCCTCGCGGGCCGCGCCAAGGACGCGGGCGACCTCCTCGCGG
CCGAGTACCGGCTTGCTGTGCATGGTTTCACTCTCCTCCGGGCAAGGCCTGGTCGAGCAGCTCGATCCAGTG
GCGTACCGGGGTCCGTCCGGCCCCGTCGAGATGGGCCTGGCAACCGACGTTGGCCGTGGCGATGACATCCGG
CGCGCCGCTTTCCAGGGCGTCCAGGCGGTTGTCGCGCAGACGCCGGGACAGCGCCGGCTGGGTCAGCGAGTA
GGTGCCGGCGGAGCCGCAGCAGAGATGACCGTCGGCCACCTCGGTGAGATGGAAGCCCAGTCGCCGCAGCAC
CGCCTCCACGGCCCCGCCCAGTCGTTGCGCGTGCTGCAGTGTGCATGGGCAGTGGAATGCCAGGCGCTGGTC
GCAGCGCAGGCCGAGGGACTCCAGCGGCTCGTCGCGAAGCACTTCCACCAGGTCGCGGGCAGCGGCGGCGAC
CTCGCGCGCCTTGTCCGCGTACCGTGGGTCGTCGCGCAGCAGGTAGGCGTAGTCCTTGACGAAGGCGCCGCA
GCCGCTGGCGGTCTGCACGATGGCCTCGGCACCCTCGCGCAGCAACGGCCACCAGGCGTCGATATTGCGCCG
CGCGCGCTGGCGGCCGCGCTCCTGCGCATCCAGGTGGAAATCCAGCGCGCCGCAGCAGCCGGCCGCGGCCGC
CGGCGTCACGCTGATTCCCAGGCGGTCCAGAACCCGCGCGGCGGCGGCGTTGGTATTCGGCGACAGCGCCGG
CTGCACGCAACCTTCGAGCAGCAGCACGCGCCGCGCATGCCGGGGCTGCGGCCGCCTGCCCGGCGCCGCGAC
CCGACGTGGCAGCTTGCCCTGCATCGCCTCAGGCAGCAGAGGCCTCAGCCGCCCGGCAGCGCCGGCCAGCAC
GCCGAACAACCCCGGGCGCGGGGCCAGCAGGCGCAGCACGTCGCGCAGCAGGCGTTGCCGGAAGCCGCGCGG
CAGGCGTTCGGCGAGGAGGTCGCGGCCGATATCCAGCAGCTTGTGGTACTCGACTCCGGATGGGCAGGTGGT
TTCGCAGTTGCGGCAGCTCAGGCAGCGATCGAGGTGCAGGCGGGTGCGCTCGCTGGCCTCGTCGCGCTCGAG
GAACTGCTTGATCAGGTAGATCCGTCCGCGCGGGCCGTCGAGTTCGTCGCCCAGCTCCTGGTAGGTCGGGCA
GGTGGCGTTGCAGAAACCGCAGTGCACGCAGCTGCGCAGGATGCGCTCGGCTTCGGCGGCCTCGGCGCGTTG
CCGGGCGGAATCGCAGAGGTTGGTTTGCATCGCGCCTCCTCAGAGTTCGGCGTACATCCGCCCGGGATTGAA
GATGCCCTGCGGGTCGAGCTGGCGTTTGAGTGCCCGGTGCAGGTCGAGCAGTCCAGGCGGTAG