ViewGene
Locus Name:
GeneID:
Location:

GeneID:6928
TrivialName: PA14_70520
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70520
PAO1 Ortholog Locus:
Sequence Length:930
Protein Length:309
Start: 6283075
Stop: 6284004
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAB88819.1| (AL939114) hypothetical protein SCE6.15. [Streptomyces coelicolor A3(2)]
Identities = 59/214 (27%), Positives = 83/214 (38%), Gaps = 27/214 (12%)
Sequence:
ATGGGTACTGGCGACAAGGACGAACGCGGCGAACATGAAGGCCCCTCGAAACGCGAAGGCCTCCAGTCTGTG
CAGCGCGGCGGGCGCCGTATTGGAAAAAACTCAGGTCTTGGCGCTGCGCCGGAACTGCCCCGGAGTGACCCC
GGTGAAACGCCGGAAGGTCGTGGAGAAGTGCGCCTGGTCGTAGAAGCCGAGGTGCTGGGCGAGTTCCGCCAG
CGGCCGTTCTTCCAGCAACAGGCGCTTGGCCTGGCGCACCCGGCATTGCAGTTGGTAGGTATGCGGCGGCAC
GCCGTAGGCACGCCGGAAAGCCTCGATGAGGTGGCGCGGATGGCGCTGCAGCAACTGCGCCAGTTGGTCCAG
ACCGAGCGCCTCGGTGGCATGCGCTTCCAGGTAATCGCGCAGGCGTGCGGTGGTTCCGCCGTCGCGGGGCGC
CGCGGCCGCCGGGCGCAAGCCGCCGTGGCGCACGAAGACCTGTTCGAGCAAGGCCAGCAGGCGGCTTTCCAA
CCCCAATGCGTCGCTGCGCTGGAAGTCCTCGGCCAGTCGCGCCAGGCCAACCGCCACGCTGCCGTCGTCGGC
CGGGTTCAGCTCGCCGAAGCCGCGCGGCAACTGTTTGCGGCCGAGCAGGCCGAGCAGGCGCGTTTCCTCGAC
ATAGAGCATCCGGTAGACCAGCCGCTCGGATTCGGCGTGCCCGGTATGCGGCTCTTCCGGGTTCATCAGCGA
CAGGGTGCCGGCCGGCAGCGCATGGCGCCGCCCGCGGCACTGGTAGCCGCCGACGCCGTGGAGGATCGAGCC
GATGGCGAAGGCCGAATGGCTGTGGCGGCCGAACGCCTGGCCGGAGAAGTCCGCATGGAACAGCTCCACGCC
AGGCAGCCAGGGACGCGCCAACAACCGGTTGGCAGCCATCAGGCGTCCCCGAGCACCGCCGCGTAG
Translation:
MGTGDKDERGEHEGPSKREGLQSVQRGGRRIGKNSGLGAAPELPRSDPGETPEGRGEVRLVVEAEVLGEFRQ
RPFFQQQALGLAHPALQLVGMRRHAVGTPESLDEVARMALQQLRQLVQTERLGGMRFQVIAQACGGSAVAGR
RGRRAQAAVAHEDLFEQGQQAAFQPQCVAALEVLGQSRQANRHAAVVGRVQLAEAARQLFAAEQAEQARFLD
IEHPVDQPLGFGVPGMRLFRVHQRQGAGRQRMAPPAALVAADAVEDRADGEGRMAVAAERLAGEVRMEQLHA
RQPGTRQQPVGSHQASPSTAA*
AnnotationID:6929GeneID:6928
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 19:07:40
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13549




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30935




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49930How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5546764Stop: 5547693

          
Length: 930


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGGTACTGGCGACAAGGACGAACGCGGCGAACATGAAGGCCCCTCGAAACGCGAAGGCCTCCAGTCTGTG 
CAGCGCGGCGGGCGCCGTATTGGAAAAAACTCAGGTCTTGGCGCTGCGCCGGAACTGCCCCGGAGTGACCCC 
GGTGAAACGCCGGAAGGTCGTGGAGAAGTGCGCCTGGTCGTAGAAGCCGAGGTGCTGGGCGAGTTCCGCCAG 
CGGCCGTTCTTCCAGCAACAGGCGCTTGGCCTGGCGCACCCGGCATTGCAGTTGGTAGGTATGCGGCGGCAC 
GCCGTAGGCACGCCGGAAAGCCTCGATGAGGTGGCGCGGATGGCGCTGCAGCAACTGCGCCAGTTGGTCCAG 
ACCGAGCGCCTCGGTGGCATGCGCTTCCAGGTAATCGCGCAGGCGTGCGGTGGTTCCGCCGTCGCGGGGCGC 
CGCGGCCGCCGGGCGCAAGCCGCCGTGGCGCACGAAGACCTGTTCGAGCAAGGCCAGCAGGCGGCTTTCCAA 
CCCCAATGCGTCGCTGCGCTGGAAGTCCTCGGCCAGTCGCGCCAGGCCAACCGCCACGCTGCCGTCGTCGGC 
CGGGTTCAGCTCGCCGAAGCCGCGCGGCAACTGTTTGCGGCCGAGCAGGCCGAGCAGGCGCGTTTCCTCGAC 
ATAGAGCATCCGGTAGACCAGCCGCTCGGATTCGGCGTGCCCGGTATGCGGCTCTTCCGGGTTCATCAGCGA 
CAGGGTGCCGGCCGGCAGCGCATGGCGCCGCCCGCGGCACTGGTAGCCGCCGACGCCGTGGAGGATCGAGCC 
GATGGCGAAGGCCGAATGGCTGTGGCGGCCGAACGCCTGGCCGGAGAAGTCCGCATGGAACAGCTCCACGCC 
AGGCAGCCAGGGACGCGCCAACAACCGGTTGGCAGCCATCAGGCGTCCCCGAGCACCGCCGCGTAG