ViewGene
Locus Name:
GeneID:
Location:

GeneID:6926
TrivialName: PA14_70410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70410
PAO1 Ortholog Locus:
Sequence Length:780
Protein Length:259
Start: 6276281
Stop: 6277060
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCGGGCGTCTGCTCATTCGGCCAGCGCGGCGCGCTGAAGTTCGAACAGCTCCTGCATGCCCTGCTGGGC
CAGTTCGAGCATGGCGTTCAGCTCGGCGGGACGGAACGGCGCGCCTTCGGCGGTTCCCTGCACCTCGATGAA
GCCGCCGGCATCGGTCATCACTACGTTCAGGTCGGTTTCCGCGGCGGAATCCTCCAGGTAGTCCAGGTCGAG
GACCGGCACGCCCTGGTAGATGCCCACGGAAACGGCGGCGACCATCTGCTTCAGCGGATTGCCCTTGAGCGC
GCCACGCTTCTTCAGCACCGCCAGGGCGTCGATCAGCGCCACGGTGGCGCCGGTGATCGAGGCGGTGCGGGT
GCCGCCGTCGGCCTGGATCACGTCGCAGTCGATGTACAGGGTGTTCTCGCCGAGCTTGCTGAGGTCCAGCGC
CGCTCGCAGGGAACGGCCGATCAGGCGCTGGATCTCCAGGGTACGACCGCCCTGCTTGCCGCGGCTGGCCTC
GCGCTGGTTACGCTCGCCGGTGGAGCGCGGCAGCATGCCGTACTCGGCGGTCAGCCAACCCTGCCCCTGGCC
CTTGAGGAAGCGCGGCACCCCGGACTCGGCGCTGACGGTGCAGATCACCTTGGTATCGCCGAACTCGACCAG
CACCGAACCTTCTGCGTGCTTGGTGTAATGGCGGGTGATGCGGATCGGGCGCAGCTGGTCGGCGGCACGGCC
ACTGGGACGATTCATCGTGGATATCCTGTACTGAGAAAGCGGAATTGGCCGCCATTATAG
Translation:
MPGVCSFGQRGALKFEQLLHALLGQFEHGVQLGGTERRAFGGSLHLDEAAGIGHHYVQVGFRGGILQVVQVE
DRHALVDAHGNGGDHLLQRIALERATLLQHRQGVDQRHGGAGDRGGAGAAVGLDHVAVDVQGVLAELAEVQR
RSQGTADQALDLQGTTALLAAAGLALVTLAGGARQHAVLGGQPTLPLALEEARHPGLGADGADHLGIAELDQ
HRTFCVLGVMAGDADRAQLVGGTATGTIHRGYPVLRKRNWPPL*
AnnotationID:6927GeneID:6926
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 18:06:20
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16669




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30931




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49928How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5539970Stop: 5540749

          
Length: 780


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCCGGGCGTCTGCTCATTCGGCCAGCGCGGCGCGCTGAAGTTCGAACAGCTCCTGCATGCCCTGCTGGGC 
CAGTTCGAGCATGGCGTTCAGCTCGGCGGGACGGAACGGCGCGCCTTCGGCGGTTCCCTGCACCTCGATGAA 
GCCGCCGGCATCGGTCATCACTACGTTCAGGTCGGTTTCCGCGGCGGAATCCTCCAGGTAGTCCAGGTCGAG 
GACCGGCACGCCCTGGTAGATGCCCACGGAAACGGCGGCGACCATCTGCTTCAGCGGATTGCCCTTGAGCGC 
GCCACGCTTCTTCAGCACCGCCAGGGCGTCGATCAGCGCCACGGTGGCGCCGGTGATCGAGGCGGTGCGGGT 
GCCGCCGTCGGCCTGGATCACGTCGCAGTCGATGTACAGGGTGTTCTCGCCGAGCTTGCTGAGGTCCAGCGC 
CGCTCGCAGGGAACGGCCGATCAGGCGCTGGATCTCCAGGGTACGACCGCCCTGCTTGCCGCGGCTGGCCTC 
GCGCTGGTTACGCTCGCCGGTGGAGCGCGGCAGCATGCCGTACTCGGCGGTCAGCCAACCCTGCCCCTGGCC 
CTTGAGGAAGCGCGGCACCCCGGACTCGGCGCTGACGGTGCAGATCACCTTGGTATCGCCGAACTCGACCAG 
CACCGAACCTTCTGCGTGCTTGGTGTAATGGCGGGTGATGCGGATCGGGCGCAGCTGGTCGGCGGCACGGCC 
ACTGGGACGATTCATCGTGGATATCCTGTACTGAGAAAGCGGAATTGGCCGCCATTATAG