ViewGene

Locus Name:
GeneID:
Location:

GeneID:6921
TrivialName: PA14_70210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70210
PAO1 Ortholog Locus:
Sequence Length:1590
Protein Length:529
Start: 6259802
Stop: 6261391
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 161/572 (28%), Positives = 195/572 (34%), Gaps = 108/572 (18%)
Sequence:
GTGTACCGAGGCCAGCCCCGAGGGCTTCGACGTGGTCCAGTACAACTCGCTGACCACCACCAACGCCTCGGC
CGATGTGCTGATGAATCGCCTGGTCGAGTTCGACGCCGGCAAGGGGACGGTGGTGCCCTCGCTGGCCGAGCG
CTGGTCGGTGTCCGACGACGGCCTGAGCTATCGCTTCGACCTGCGCCAGGGCGTGCACTTCCACAGCACCGC
CTACTTCAAGCCGAGCCGTACGCTCGACGCCGACGACGTGGTGTTCAGCTTCCAGCGCATGCTCGATCCGGC
CAATCCCTGGCACAAGGTGGCGCAGAACGGCTTCCCGCACGCCCAGTCGATGCAACTACCGGAGCTGATCAA
GCGGGTGGAGAAAAGCGGCGACCACCAGGTGCTGATCGTTCTCGACCACCCCGACGCGACCTTCCTGCCGAT
GCTGAGCATGGGCTTCGCCTCCATCTATTCGGCGGAGTACGCCGACCAGTTGATGAAGGCCGGAACCCCGGA
AAAGCTCAACACCGCGCCGATCGGCAGCGGGCCGTTCGTGTTCAAGCGCTTCCAGAAGGACGCGGTGGTGCG
CTACGCCGCCAACCCCGAGTACTTCGCCGGCAAGCCGGCGGTCGACGCGCTGATCTTCGCCATTACCCCGGA
CGCCAACGTGCGCCTGCAGAAGTTGCGCCGCGGCGAATGCCAGATCGCCCTGTCGCCGAAGCCGCTGGACGT
GGAGAGCGCGCGCAAGGACGCCAGCCTGAAGGTCGAGCAGACGCCGGCCTTCATGACCGCCTTCGTCGCCCT
CAATACCCAGCATCCGCCGCTGGACGATCCCAAGGTGCGCCAGGCGATCAACCTGGCCTTCGACCGCACCAG
CTACCTGCAGGCGGTATTCGAAGGCAGCGCCAGTGCCGCCACCGGCATCTATCCGCCAAACACCTGGAGCTA
TGCCAGGGATATTCCCGCCTACCCGCACGACCCCGAACAGGCGCGCAAGCTGCTGGCTGGCAAGCAGCTTCC
CGAGCTGAACATCTGGACCCGCCCGTCCGGCAGCCTGCTCAACCCCAACCCGAGCCTCGGCGCCCAACTGCT
CCAGGCCGACCTGGCGGAGGCCGGGATCAAGGCCAACATCCGCGTCATCGAATGGGGCGAGTTGATCCGTCG
CGCCAAGAACGGCGAACACGACCTGCTGTTCATGGGTTGGGCCGGCGACAACGGCGATCCGGACAACTTCCT
CACTCCGCAATTCAGCTGCGCCAGCGTCAAGTCGGGGCTCAACTTCGCGCGCTATTGCGACCCCGGCCTGGA
CAAGCTGATTGCCGACGGCAAGGCCGCCAGCAGCCAGGAACAACGCACCGGCCTGTACCACCAGGCGCAGAA
ACTGATCCACGAACAGGCGCTCTGGCTGCCCCTGGCCCACCCGACCGCCTTCGCCCTGACCCGCCAGGAGGT
GCAGGGCTACCAGGTCAATCCGTTCGGTCGCCAGGATTTCTCGCGGGTCGCCGTGAAACGCTGAAGGCCACG
CCCGGGAGAACCCAGCGATGGATCTCGACCGTCTCTACCTGCCGCATTGGCAGTTCAGCGAGCGCCATCAGC
GGCTGA
Translation:
MYRGQPRGLRRGPVQLADHHQRLGRCADESPGRVRRRQGDGGALAGRALVGVRRRPELSLRPAPGRALPQHR
LLQAEPYARRRRRGVQLPAHARSGQSLAQGGAERLPARPVDATTGADQAGGEKRRPPGADRSRPPRRDLPAD
AEHGLRLHLFGGVRRPVDEGRNPGKAQHRADRQRAVRVQALPEGRGGALRRQPRVLRRQAGGRRADLRHYPG
RQRAPAEVAPRRMPDRPVAEAAGRGERAQGRQPEGRADAGLHDRLRRPQYPASAAGRSQGAPGDQPGLRPHQ
LPAGGIRRQRQCRHRHLSAKHLELCQGYSRLPARPRTGAQAAGWQAASRAEHLDPPVRQPAQPQPEPRRPTA
PGRPGGGRDQGQHPRHRMGRVDPSRQERRTRPAVHGLGRRQRRSGQLPHSAIQLRQRQVGAQLRALLRPRPG
QADCRRQGRQQPGTTHRPVPPGAETDPRTGALAAPGPPDRLRPDPPGGAGLPGQSVRSPGFLAGRRETLKAT
PGRTQRWISTVSTCRIGSSASAISG*
AnnotationID:6922GeneID:6921
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 14:02:03
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16665
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30921
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49923How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5523491Stop: 5525080
Length: 1590
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGTACCGAGGCCAGCCCCGAGGGCTTCGACGTGGTCCAGTACAACTCGCTGACCACCACCAACGCCTCGGC
CGATGTGCTGATGAATCGCCTGGTCGAGTTCGACGCCGGCAAGGGGACGGTGGTGCCCTCGCTGGCCGAGCG
CTGGTCGGTGTCCGACGACGGCCTGAGCTATCGCTTCGACCTGCGCCAGGGCGTGCACTTCCACAGCACCGC
CTACTTCAAGCCGAGCCGTACGCTCGACGCCGACGACGTGGTGTTCAGCTTCCAGCGCATGCTCGATCCGGC
CAATCCCTGGCACAAGGTGGCGCAGAACGGCTTCCCGCACGCCCAGTCGATGCAACTACCGGAGCTGATCAA
GCGGGTGGAGAAAAGCGGCGACCACCAGGTGCTGATCGTTCTCGACCACCCCGACGCGACCTTCCTGCCGAT
GCTGAGCATGGGCTTCGCCTCCATCTATTCGGCGGAGTACGCCGACCAGTTGATGAAGGCCGGAACCCCGGA
AAAGCTCAACACCGCGCCGATCGGCAGCGGGCCGTTCGTGTTCAAGCGCTTCCAGAAGGACGCGGTGGTGCG
CTACGCCGCCAACCCCGAGTACTTCGCCGGCAAGCCGGCGGTCGACGCGCTGATCTTCGCCATTACCCCGGA
CGCCAACGTGCGCCTGCAGAAGTTGCGCCGCGGCGAATGCCAGATCGCCCTGTCGCCGAAGCCGCTGGACGT
GGAGAGCGCGCGCAAGGACGCCAGCCTGAAGGTCGAGCAGACGCCGGCCTTCATGACCGCCTTCGTCGCCCT
CAATACCCAGCATCCGCCGCTGGACGATCCCAAGGTGCGCCAGGCGATCAACCTGGCCTTCGACCGCACCAG
CTACCTGCAGGCGGTATTCGAAGGCAGCGCCAGTGCCGCCACCGGCATCTATCCGCCAAACACCTGGAGCTA
TGCCAGGGATATTCCCGCCTACCCGCACGACCCCGAACAGGCGCGCAAGCTGCTGGCTGGCAAGCAGCTTCC
CGAGCTGAACATCTGGACCCGCCCGTCCGGCAGCCTGCTCAACCCCAACCCGAGCCTCGGCGCCCAACTGCT
CCAGGCCGACCTGGCGGAGGCCGGGATCAAGGCCAACATCCGCGTCATCGAATGGGGCGAGTTGATCCGTCG
CGCCAAGAACGGCGAACACGACCTGCTGTTCATGGGTTGGGCCGGCGACAACGGCGATCCGGACAACTTCCT
CACTCCGCAATTCAGCTGCGCCAGCGTCAAGTCGGGGCTCAACTTCGCGCGCTATTGCGACCCCGGCCTGGA
CAAGCTGATTGCCGACGGCAAGGCCGCCAGCAGCCAGGAACAACGCACCGGCCTGTACCACCAGGCGCAGAA
ACTGATCCACGAACAGGCGCTCTGGCTGCCCCTGGCCCACCCGACCGCCTTCGCCCTGACCCGCCAGGAGGT
GCAGGGCTACCAGGTCAATCCGTTCGGTCGCCAGGATTTCTCGCGGGTCGCCGTGAAACGCTGAAGGCCACG
CCCGGGAGAACCCAGCGATGGATCTCGACCGTCTCTACCTGCCGCATTGGCAGTTCAGCGAGCGCCATCAGC
GGCTGA