ViewGene

Locus Name:
GeneID:
Location:

GeneID:6920
TrivialName: PA14_70150
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70150
PAO1 Ortholog Locus:
Sequence Length:1413
Protein Length:470
Start: 6258449
Stop: 6257037
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 101/352 (28%), Positives = 124/352 (35%), Gaps = 68/352 (19%)
Sequence:
GTGGTTCTGGCCAGTTGGAGGCAGGGCGGCGCCAGCCGCCCGCCTGGATCAGACGCTGGCGCGGATGGCCTG
GGCCAGGCGCTCGACGATCTGGTCGATGTGGGGCTTGTCGATGATCAGCGGCGGCGACATGGCGATGATGTC
GCCGGTCACCCGGACCATCAGGTCGTGCTCCCAGAAGCAGCGCTCGAAGACGTCGTAGCCGCGCTTGCCGGG
GCCGTCCGCGTGCGGCGCCAGTTGCACGCCGCCGACCAGGCCGACGGCGCGGATGTCGACCACGTTGGGCAG
GTCGCGCAGGCTGAACAGCGCGTCCTGCCAGTAGCCTTCCAGTTCGACGGCCCGCTGGAACAGGTCGTCGCG
ACGGTAGATGTCCAGGGTCGCCAGGGCGGCGGCGCAGGCTACCGGGTGGCCGGAATAGGTATAGCCGTGGAA
GAACTCGATGGCGCCCTGCGGGCCTTGCATGAAGGCGGCGTGGATCTTCTCGTCGACGAATACGGCGCCCAT
CGGGATGCTGCCGTTGGTCAGCCCCTTGGCGCAGGTCAACAGGTCCGGGACGACGCCCCAGCGCTGCGCGGC
GAAGGCTTCGCCGACGCGGCCGAAACCGGTGATCACTTCGTCGAAGATCAGCAGGATGCCATGCTTGCGGGT
GATCTCGCGCAGCCGCTGAAGGTAGCCCTTGGGCGGCAGCACCACGCCGGCCGAGCCGGACATCGGCTCGAC
GATCACCGCGGCGATATTCTCGGCGCCGTGCAGGGTCACCAGGCGTTCCAGCTCCTCGGCCTTTTCCGCACC
ATGCTCGGGCAGGCCGACGGTGAAGGCGTTGCGGGCGACGTCCAGGGTGTGCGGCAGGTGGTCGACCCCCGG
CAGCAGGTTGGCGGAGAAGGCCTTGCGGTTGTTGACCATGCCGCCTACCGACAGGCCGCCGAAGCCGACCCC
GTGGTAGCCCAGTTCGCGGCCGATCAGGCGGGTGCGGGTGCCCTGGCCGATGGCGCGCTGGTAGGCAAGGGC
GATCTTCAGCGCGGTGTCCGCCGATTCCGAGCCGGAGTTGGTGAAGAACACTTTGTTCAGGCCCGGCGGGGC
GATTTCCGCCAGCCGCGCGGCGAGTTCGAACGGCAGCGGGTGACCCATCTGGAACGGCGGGGCGTAGTCGAG
GGTGGCGATCTGCCGGGCCACCGCTTCGCTGATCTCGCGCCGGCCGTGGCCGGCATTGCAGCACCAGAGGCC
GGCGGTGCCGTCGAGGATGCGGCGCCCGCCCTGGGCGATATAGTGGATGCCTTCGGCGCTTTCCAGCAGGCG
CGGCCGCGCCTTGAACTGGCGGTTGGCGGTGAAGGGCATCCAGAAGTTGTCGAGGCTGCTCGACTGCGGCTC
GTTATTCATTGTCATAGGGCCACCCAGGTTGCACGCGAGGGATGA
Translation:
MVLASWRQGGASRPPGSDAGADGLGQALDDLVDVGLVDDQRRRHGDDVAGHPDHQVVLPEAALEDVVAALAG
AVRVRRQLHAADQADGADVDHVGQVAQAEQRVLPVAFQFDGPLEQVVATVDVQGRQGGGAGYRVAGIGIAVE
ELDGALRALHEGGVDLLVDEYGAHRDAAVGQPLGAGQQVRDDAPALRGEGFADAAETGDHFVEDQQDAMLAG
DLAQPLKVALGRQHHAGRAGHRLDDHRGDILGAVQGHQAFQLLGLFRTMLGQADGEGVAGDVQGVRQVVDPR
QQVGGEGLAVVDHAAYRQAAEADPVVAQFAADQAGAGALADGALVGKGDLQRGVRRFRAGVGEEHFVQARRG
DFRQPRGEFERQRVTHLERRGVVEGGDLPGHRFADLAPAVAGIAAPEAGGAVEDAAPALGDIVDAFGAFQQA
RPRLELAVGGEGHPEVVEAARLRLVIHCHRATQVAREG*
AnnotationID:6921GeneID:6920
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 13:01:17
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16663
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30919
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49922How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5522138Stop: 5520726
Length: 1413
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTTCTGGCCAGTTGGAGGCAGGGCGGCGCCAGCCGCCCGCCTGGATCAGACGCTGGCGCGGATGGCCTG
GGCCAGGCGCTCGACGATCTGGTCGATGTGGGGCTTGTCGATGATCAGCGGCGGCGACATGGCGATGATGTC
GCCGGTCACCCGGACCATCAGGTCGTGCTCCCAGAAGCAGCGCTCGAAGACGTCGTAGCCGCGCTTGCCGGG
GCCGTCCGCGTGCGGCGCCAGTTGCACGCCGCCGACCAGGCCGACGGCGCGGATGTCGACCACGTTGGGCAG
GTCGCGCAGGCTGAACAGCGCGTCCTGCCAGTAGCCTTCCAGTTCGACGGCCCGCTGGAACAGGTCGTCGCG
ACGGTAGATGTCCAGGGTCGCCAGGGCGGCGGCGCAGGCTACCGGGTGGCCGGAATAGGTATAGCCGTGGAA
GAACTCGATGGCGCCCTGCGGGCCTTGCATGAAGGCGGCGTGGATCTTCTCGTCGACGAATACGGCGCCCAT
CGGGATGCTGCCGTTGGTCAGCCCCTTGGCGCAGGTCAACAGGTCCGGGACGACGCCCCAGCGCTGCGCGGC
GAAGGCTTCGCCGACGCGGCCGAAACCGGTGATCACTTCGTCGAAGATCAGCAGGATGCCATGCTTGCGGGT
GATCTCGCGCAGCCGCTGAAGGTAGCCCTTGGGCGGCAGCACCACGCCGGCCGAGCCGGACATCGGCTCGAC
GATCACCGCGGCGATATTCTCGGCGCCGTGCAGGGTCACCAGGCGTTCCAGCTCCTCGGCCTTTTCCGCACC
ATGCTCGGGCAGGCCGACGGTGAAGGCGTTGCGGGCGACGTCCAGGGTGTGCGGCAGGTGGTCGACCCCCGG
CAGCAGGTTGGCGGAGAAGGCCTTGCGGTTGTTGACCATGCCGCCTACCGACAGGCCGCCGAAGCCGACCCC
GTGGTAGCCCAGTTCGCGGCCGATCAGGCGGGTGCGGGTGCCCTGGCCGATGGCGCGCTGGTAGGCAAGGGC
GATCTTCAGCGCGGTGTCCGCCGATTCCGAGCCGGAGTTGGTGAAGAACACTTTGTTCAGGCCCGGCGGGGC
GATTTCCGCCAGCCGCGCGGCGAGTTCGAACGGCAGCGGGTGACCCATCTGGAACGGCGGGGCGTAGTCGAG
GGTGGCGATCTGCCGGGCCACCGCTTCGCTGATCTCGCGCCGGCCGTGGCCGGCATTGCAGCACCAGAGGCC
GGCGGTGCCGTCGAGGATGCGGCGCCCGCCCTGGGCGATATAGTGGATGCCTTCGGCGCTTTCCAGCAGGCG
CGGCCGCGCCTTGAACTGGCGGTTGGCGGTGAAGGGCATCCAGAAGTTGTCGAGGCTGCTCGACTGCGGCTC
GTTATTCATTGTCATAGGGCCACCCAGGTTGCACGCGAGGGATGA