ViewGene

Locus Name:
GeneID:
Location:

GeneID:6918
TrivialName: PA14_70090
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_70090
PAO1 Ortholog Locus:
Sequence Length:1371
Protein Length:456
Start: 6252400
Stop: 6251030
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25503.1| (AE006013) FolC bifunctional protein [Caulobacter crescentus CB15]
Identities = 57/207 (27%), Positives = 83/207 (40%), Gaps = 41/207 (19%)
Sequence:
ATGCCCCGCCTGATTTTTTCAGAATCCGCCGAGCCTCGGATGGGCTCAGCTACCGAGTTTTTCCTTCAGCCG
GTACCAGGCCATGCCCAGCGCCAGCAGTGGCGAGCGCAGCAGCTTGCCGCCGGGGAAGGTGATGTGCGGCAC
CTTGGCGAACAGGTCGAAGCCGTCGCTCTGCTGGCCGCCGATGGCTTCGGCGAGCAACTGCCCGGCGAGGTG
CGTGGCGTTCACCCCGTGTCCGGAATAGGCCTGGGCGAAGTACACGTTGGGCTGCCCCGGCAGGCGGCCGAT
CTGTGGCAGGCGATTGGCACCGATGCCGATCATGCCGCCCCATTGGTAGTCGATGCGGACGTTCGCCAGTTG
CGGGAATACCTCCAGCATCTTCGGCCGCATGTAGGCGGCGATGTCGCTGGGGTCGCGGCCGGAATAATGGCA
GGCGCCACCGAACAGCAGGCGGTTGTCGGCGGAGAGCCGGTAGTAGTCGAGGGCCACGCGCTGGTCGCACAC
TGCCATGTTCTGCGGCAGCAGTTGGCGGGCCAGTTGCTCGTCCAGCGGTTCGGTGGCGATCACGTAGCTGCC
GGCCGGCAGTACCTTGCCGCCGAGCAGCGGGTTGAGGTCGTTCATGTAGGCGTTGCAGCCCAGCACCAGGGT
CTTCGCCCGCACCTTGCCGGCGGCGGTATGCACCTGGACTTCCGTGCCGTAGTCGATGCGCGTCACCGGCGA
GCGCTCGAACAGGCGGACGCCCAGCGACTGGGCAGCGGCGGCTTCGCCGAGGACCAGGTTGAGCGGGTGCAG
GTGGCCGGAGCCCATGTCCACCAGGCCGCCGACGTAGCGATCGGAGCCGACCACGCTGCGCATCTCCGCGGC
CGGCACCAGGCGCATCTCGTGGCGATAGCCGAGGGCCTGGAGTTCCTCCATGTCCTCGCGGAAGCCCTGGTA
GTCGCCGGGCTTGTTCGCCAGGTCGCAGTAGCCCCAGCGCAGATCGCAGTCGATGGCGTATTGCTCGACCCG
GCGACGGACGATCTCCACCGCCTCCAGGCCCATCAGCTTGAGTGCCTTCACGCCGTCGGCGCCGATCACCGG
GAGGAACTGCTCGACGTCATGGCCGACGCCGCGGATCAACTGGCCGCCATTGCGCCCACTGGCGCCCCAGCC
GATCCGGTGCGCTTCCAGCAGGACCACGGAGAAGCCGCGCTGGGCCAGTTCCAACGCCGTGTTCACTCCCGA
GAAGCCGCCGCCGACGACGCACACGTCGGCCTGTTCTTCGCCGGCCAGGGGAGGGCACTCGATGCGTCGGTT
GAGCGTGGCGGCGTAGTAGGAGGGGGCGTGTTGGGCGGTATGCACCGGCTGGTGAACGCGGGCGTTCATGTG
TGA
Translation:
MPRLIFSESAEPRMGSATEFFLQPVPGHAQRQQWRAQQLAAGEGDVRHLGEQVEAVALLAADGFGEQLPGEV
RGVHPVSGIGLGEVHVGLPRQAADLWQAIGTDADHAAPLVVDADVRQLREYLQHLRPHVGGDVAGVAAGIMA
GATEQQAVVGGEPVVVEGHALVAHCHVLRQQLAGQLLVQRFGGDHVAAGRQYLAAEQRVEVVHVGVAAQHQG
LRPHLAGGGMHLDFRAVVDARHRRALEQADAQRLGSGGFAEDQVERVQVAGAHVHQAADVAIGADHAAHLRG
RHQAHLVAIAEGLEFLHVLAEALVVAGLVRQVAVAPAQIAVDGVLLDPATDDLHRLQAHQLECLHAVGADHR
EELLDVMADAADQLAAIAPTGAPADPVRFQQDHGEAALGQFQRRVHSREAAADDAHVGLFFAGQGRALDASV
ERGGVVGGGVLGGMHRLVNAGVHV*
AnnotationID:6919GeneID:6918
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 13:01:24
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13532
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30915
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49920How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5516089Stop: 5514719
Length: 1371
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCCCGCCTGATTTTTTCAGAATCCGCCGAGCCTCGGATGGGCTCAGCTACCGAGTTTTTCCTTCAGCCG
GTACCAGGCCATGCCCAGCGCCAGCAGTGGCGAGCGCAGCAGCTTGCCGCCGGGGAAGGTGATGTGCGGCAC
CTTGGCGAACAGGTCGAAGCCGTCGCTCTGCTGGCCGCCGATGGCTTCGGCGAGCAACTGCCCGGCGAGGTG
CGTGGCGTTCACCCCGTGTCCGGAATAGGCCTGGGCGAAGTACACGTTGGGCTGCCCCGGCAGGCGGCCGAT
CTGTGGCAGGCGATTGGCACCGATGCCGATCATGCCGCCCCATTGGTAGTCGATGCGGACGTTCGCCAGTTG
CGGGAATACCTCCAGCATCTTCGGCCGCATGTAGGCGGCGATGTCGCTGGGGTCGCGGCCGGAATAATGGCA
GGCGCCACCGAACAGCAGGCGGTTGTCGGCGGAGAGCCGGTAGTAGTCGAGGGCCACGCGCTGGTCGCACAC
TGCCATGTTCTGCGGCAGCAGTTGGCGGGCCAGTTGCTCGTCCAGCGGTTCGGTGGCGATCACGTAGCTGCC
GGCCGGCAGTACCTTGCCGCCGAGCAGCGGGTTGAGGTCGTTCATGTAGGCGTTGCAGCCCAGCACCAGGGT
CTTCGCCCGCACCTTGCCGGCGGCGGTATGCACCTGGACTTCCGTGCCGTAGTCGATGCGCGTCACCGGCGA
GCGCTCGAACAGGCGGACGCCCAGCGACTGGGCAGCGGCGGCTTCGCCGAGGACCAGGTTGAGCGGGTGCAG
GTGGCCGGAGCCCATGTCCACCAGGCCGCCGACGTAGCGATCGGAGCCGACCACGCTGCGCATCTCCGCGGC
CGGCACCAGGCGCATCTCGTGGCGATAGCCGAGGGCCTGGAGTTCCTCCATGTCCTCGCGGAAGCCCTGGTA
GTCGCCGGGCTTGTTCGCCAGGTCGCAGTAGCCCCAGCGCAGATCGCAGTCGATGGCGTATTGCTCGACCCG
GCGACGGACGATCTCCACCGCCTCCAGGCCCATCAGCTTGAGTGCCTTCACGCCGTCGGCGCCGATCACCGG
GAGGAACTGCTCGACGTCATGGCCGACGCCGCGGATCAACTGGCCGCCATTGCGCCCACTGGCGCCCCAGCC
GATCCGGTGCGCTTCCAGCAGGACCACGGAGAAGCCGCGCTGGGCCAGTTCCAACGCCGTGTTCACTCCCGA
GAAGCCGCCGCCGACGACGCACACGTCGGCCTGTTCTTCGCCGGCCAGGGGAGGGCACTCGATGCGTCGGTT
GAGCGTGGCGGCGTAGTAGGAGGGGGCGTGTTGGGCGGTATGCACCGGCTGGTGAACGCGGGCGTTCATGTG
TGA