ViewGene

Locus Name:
GeneID:
Location:

GeneID:6906
TrivialName: PA14_69680
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_69680
PAO1 Ortholog Locus:
Sequence Length:1485
Protein Length:494
Start: 6217288
Stop: 6215804
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCGGACGCAGCACGCCGCAGACGGTCTTGCCGCCGGAGAGCAGGCCGCCGATGGCCTGGTGCGCCTCCGC
GCTGCTCACCGAGCGGCCCACCGAGACGCTACTGTCGCTGAACAGGATCAGGCTCACGTAGGGCACATGGAA
CTCGTGGCGCAGGCTGTCCTCGACGGTACTGACCACGTCTTCCAGGCTGGTGGCGTCGAGCAGGTCGAGGAC
CAGGCGGCGGGTCTTGTCGAACAGGCGGTCGTTCTCGCGGGCCACGTCCATCAGTTGCGAGAGCCGGTGGCG
CATCTCGATGTTGCGCTCGCGCAGCAGGCGTACCTGGCGCTCCACCAGCGACACGGCGTCGCCGGGCTGGTG
CGGGATGCGCAGCTCGGGGATCAGCTCGTCATGCTCGACGAAGAACTCCGGGTGCTGGCTCAGATAGGCGGC
CACCTGCTCGGCGTCCAGCGCTGCTGTCGGTTCCTGGCTTTTCTCGGTCATAAGCGTCTCGGTTCTCGCGGG
CGACGGCCCTTACAGGCGGACCTGGCCTTCATACACGCGGACGGCAGGCCCGGTCATCATAACGGGCTGGCC
GGGACCTGCCCACTCGATGTGCAGGCGGCCGCCGGGGAGGTCGATCTGCACCGGCGATTGCAGCCAGCCCTG
GCGAATCCCGGCAACCGCCGCGGCGCAGGCGCCGGTGCCGCAGGCCTGGGTCTCGCCGACGCCGCGCTCCCA
GACGCGCAGGCGCGCATGGTGCGGATCGAGCACCTGGAGGAAGCCGATGTTGGCCTTCTTCGGGAAGCGCGG
ATGGACTTCCAGTTGCGGACCGAGGCTGTGTACCGGTGCGCTGTCGACGTTCTCGACGCGCAGCACGCCATG
GGGATTGCCCATGGATACCGCGGCCAGTTCGACGCGCTGGCCATTCACCTCTATCTCATAGGACAAGGCTTC
GCGCTCGGCCTGGAACGGTATCTCGGCCGGGGCCAGGCGCGGCGGACCCATGTCCACCGTGACCTGGCCGTC
CGGGCGGATATTCAGCTCGATGATGCCGCCCTTGGTTTCTACGCGGATGCTCTTCTTCACCGTCAGGCGCTT
GTCCTGAACGAAGCGGGCGAAGCAGCGGGCGCCGTTGCCGCACTGCTCGACCTCGGAGCCGTCGGCGTTGAA
AATCCGGTAGCGGAAGTCGACGTCGGGGCTGCTCGGGGCTTCGACGATCAGCAACTGGTCGAAGCCGACCCC
GGTGTTGCGGTCGCCCCAGAGCTTGACGTGCTTGGGCTGCACATGGGCGTGCTGGCTGACCAGGTCGAGGAC
CATGAAGTCGTTGCCCAGGCCATGCATCTTGGTGAAGCGCAAAAGCATAGTCTGGGCCTCACTGCGGCAGCA
GGCTTTCGCCGGCGTAGAGCTCTTGGACGGTCTCGCGGCGACGGACCTCGTGGGTCTGCTCGCCATCCACCA
GCACCTCGGCGGCGCGACCGCGGGTGTTGTAGTTCGAGCTCATGA
Translation:
MRTQHAADGLAAGEQAADGLVRLRAAHRAAHRDATVAEQDQAHVGHMELVAQAVLDGTDHVFQAGGVEQVED
QAAGLVEQAVVLAGHVHQLREPVAHLDVALAQQAYLALHQRHGVAGLVRDAQLGDQLVMLDEELRVLAQIGG
HLLGVQRCCRFLAFLGHKRLGSRGRRPLQADLAFIHADGRPGHHNGLAGTCPLDVQAAAGEVDLHRRLQPAL
ANPGNRRGAGAGAAGLGLADAALPDAQARMVRIEHLEEADVGLLREARMDFQLRTEAVYRCAVDVLDAQHAM
GIAHGYRGQFDALAIHLYLIGQGFALGLERYLGRGQARRTHVHRDLAVRADIQLDDAALGFYADALLHRQAL
VLNEAGEAAGAVAALLDLGAVGVENPVAEVDVGAARGFDDQQLVEADPGVAVAPELDVLGLHMGVLADQVED
HEVVAQAMHLGEAQKHSLGLTAAAGFRRRRALGRSRGDGPRGSARHPPAPRRRDRGCCSSSS*
AnnotationID:6907GeneID:6906
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 08:08:09
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16651
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30891
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49908How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5480975Stop: 5479491
Length: 1485
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGGACGCAGCACGCCGCAGACGGTCTTGCCGCCGGAGAGCAGGCCGCCGATGGCCTGGTGCGCCTCCGC
GCTGCTCACCGAGCGGCCCACCGAGACGCTACTGTCGCTGAACAGGATCAGGCTCACGTAGGGCACATGGAA
CTCGTGGCGCAGGCTGTCCTCGACGGTACTGACCACGTCTTCCAGGCTGGTGGCGTCGAGCAGGTCGAGGAC
CAGGCGGCGGGTCTTGTCGAACAGGCGGTCGTTCTCGCGGGCCACGTCCATCAGTTGCGAGAGCCGGTGGCG
CATCTCGATGTTGCGCTCGCGCAGCAGGCGTACCTGGCGCTCCACCAGCGACACGGCGTCGCCGGGCTGGTG
CGGGATGCGCAGCTCGGGGATCAGCTCGTCATGCTCGACGAAGAACTCCGGGTGCTGGCTCAGATAGGCGGC
CACCTGCTCGGCGTCCAGCGCTGCTGTCGGTTCCTGGCTTTTCTCGGTCATAAGCGTCTCGGTTCTCGCGGG
CGACGGCCCTTACAGGCGGACCTGGCCTTCATACACGCGGACGGCAGGCCCGGTCATCATAACGGGCTGGCC
GGGACCTGCCCACTCGATGTGCAGGCGGCCGCCGGGGAGGTCGATCTGCACCGGCGATTGCAGCCAGCCCTG
GCGAATCCCGGCAACCGCCGCGGCGCAGGCGCCGGTGCCGCAGGCCTGGGTCTCGCCGACGCCGCGCTCCCA
GACGCGCAGGCGCGCATGGTGCGGATCGAGCACCTGGAGGAAGCCGATGTTGGCCTTCTTCGGGAAGCGCGG
ATGGACTTCCAGTTGCGGACCGAGGCTGTGTACCGGTGCGCTGTCGACGTTCTCGACGCGCAGCACGCCATG
GGGATTGCCCATGGATACCGCGGCCAGTTCGACGCGCTGGCCATTCACCTCTATCTCATAGGACAAGGCTTC
GCGCTCGGCCTGGAACGGTATCTCGGCCGGGGCCAGGCGCGGCGGACCCATGTCCACCGTGACCTGGCCGTC
CGGGCGGATATTCAGCTCGATGATGCCGCCCTTGGTTTCTACGCGGATGCTCTTCTTCACCGTCAGGCGCTT
GTCCTGAACGAAGCGGGCGAAGCAGCGGGCGCCGTTGCCGCACTGCTCGACCTCGGAGCCGTCGGCGTTGAA
AATCCGGTAGCGGAAGTCGACGTCGGGGCTGCTCGGGGCTTCGACGATCAGCAACTGGTCGAAGCCGACCCC
GGTGTTGCGGTCGCCCCAGAGCTTGACGTGCTTGGGCTGCACATGGGCGTGCTGGCTGACCAGGTCGAGGAC
CATGAAGTCGTTGCCCAGGCCATGCATCTTGGTGAAGCGCAAAAGCATAGTCTGGGCCTCACTGCGGCAGCA
GGCTTTCGCCGGCGTAGAGCTCTTGGACGGTCTCGCGGCGACGGACCTCGTGGGTCTGCTCGCCATCCACCA
GCACCTCGGCGGCGCGACCGCGGGTGTTGTAGTTCGAGCTCATGA