ViewGene

Locus Name:
GeneID:
Location:

GeneID:6897
TrivialName: PA14_69410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_69410
PAO1 Ortholog Locus:
Sequence Length:1452
Protein Length:483
Start: 6190426
Stop: 6191877
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGAAAGCCTCCGGCCGTTTCAAGCCGCAAGGCCGCTCTGCGGCAAGACATCCCGAATCATGCCAGGCGCC
CGCGACAAGCCGCCACAGTCCTGCCGATGGAGCCGAACGGGGAACGCCGGGTGGCGTTCCCCATGCTCAAAT
GCCCGCCACCACCACGGGCAGCCCCGGAGTACGCCGATCGAGCAGGACCAGGCCCTCCTGGAACAACTGGTT
GCTGCGCTCGACCTCGCCGAGCTGCGCCAGCAGGCGTCCCAGCTCGGCGCAGGTCTCGGCACTGCGCTGGAA
GCTCAGGCTGGCCTCCAGGTATTCCCGGGCCTTGCCCCAGAGCTTGTTGATCAGGCACAGGCGCCCCAGGGT
CAGCAGCAGGCCGGGATCGTTCGGATGTTCCTTGAGCCAACCTTCCGCGGCCTGCAATTGCTTGCCCGGATC
GCGCCCGCGCACCTGCCCGTAGAGTTGCACCAGGGTCGCGTCGAAGCCTTGCTTGAGCGCATGGCGGAGGAC
TTCTTCAGCCTCTTCCTCGGCGCCCAGGCGAAGCAGTTGGGCGGCATAGCCCGCGACGATCGCCGGGTCTGC
ACGCAGCGCCGAAGGCACGTTCTGCCAGCGCTGGGTCAGCGGCTGCAACGCCGTCTCGCCCTCGTTCAGTCC
ACGCTCGCCGGCTTCCTGCAAGGAAGCCACCCAGGCACGGCGTTCGAGGTCGCGCAGTTCGGAATCCTTCAG
CACACGCTCCTTGCGCAGCTCCGGCAGCAGGACGCAAAGGGCCTGCCAGTCGTGCTGGGTGACGTACAGCTG
CTGCATCAGCCGCAATACCGTGCGGTGCTGCGGCTGGAGCCCGTGCAGCTCTTCAAGGGTATTGCGTGCCTG
CGGGTAGTCGCCGCGATTGATCAGCAGTTGCGCACGGGTCAGGCCGACCAGCAATTGGGCGTCCGGCTCGCG
CTCGCGAGCCCGGTTCAGCAGGTCGTCGGCCTCGTCGTAGCGTTCGAGTTCGTTGGCGGCCCGCGCCGCGCC
GAGGTAATGCATCAGCGGCCGCTCGCCCATCTCCGCCGCCCGCCGCAAGTGACGCAGTGCCTGCGGCCAGTT
GCCTTCGCCGAGATCGCGCAGGCCGCTGTGCTCGGCCATCTGCACGCGACGCCGGCGGTTGTAGCGCGACCA
GGGGTTGACCACCCGCCCCGAGCTGCCGAGCAGGCGCAGGACCAGGCGCACCAGCACCACCAGCAGCCAGAC
CACCGCCAGCAGGGCGAGGAACGACCACAGGCTGGATTCGTAACGGAAGCTCTTGTAGGCGATCAGCACATA
GCCGGCCTGCTCGGAGATCGCCAGCCCAACCAGCGTGGCGACCAGCACCACCGCCAGAACCAGGAGGTAGAT
GCGTCTCATGGACGGCCCTCCGTGGCCGGAGCCGCCTGCGCCTCGGGCACCAGGTTGCCAGCGGCCTCGCGG
CGCGACACGTAG
Translation:
MESLRPFQAARPLCGKTSRIMPGARDKPPQSCRWSRTGNAGWRSPCSNARHHHGQPRSTPIEQDQALLEQLV
AALDLAELRQQASQLGAGLGTALEAQAGLQVFPGLAPELVDQAQAPQGQQQAGIVRMFLEPTFRGLQLLARI
APAHLPVELHQGRVEALLERMAEDFFSLFLGAQAKQLGGIARDDRRVCTQRRRHVLPALGQRLQRRLALVQS
TLAGFLQGSHPGTAFEVAQFGILQHTLLAQLRQQDAKGLPVVLGDVQLLHQPQYRAVLRLEPVQLFKGIACL
RVVAAIDQQLRTGQADQQLGVRLALASPVQQVVGLVVAFEFVGGPRRAEVMHQRPLAHLRRPPQVTQCLRPV
AFAEIAQAAVLGHLHATPAVVARPGVDHPPRAAEQAQDQAHQHHQQPDHRQQGEERPQAGFVTEALVGDQHI
AGLLGDRQPNQRGDQHHRQNQEVDASHGRPSVAGAACASGTRLPAASRRDT*
AnnotationID:6898GeneID:6897
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 07:07:04
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16643
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30874
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49899How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5454113Stop: 5455564
Length: 1452
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGAAAGCCTCCGGCCGTTTCAAGCCGCAAGGCCGCTCTGCGGCAAGACATCCCGAATCATGCCAGGCGCC
CGCGACAAGCCGCCACAGTCCTGCCGATGGAGCCGAACGGGGAACGCCGGGTGGCGTTCCCCATGCTCAAAT
GCCCGCCACCACCACGGGCAGCCCCGGAGTACGCCGATCGAGCAGGACCAGGCCCTCCTGGAACAACTGGTT
GCTGCGCTCGACCTCGCCGAGCTGCGCCAGCAGGCGTCCCAGCTCGGCGCAGGTCTCGGCACTGCGCTGGAA
GCTCAGGCTGGCCTCCAGGTATTCCCGGGCCTTGCCCCAGAGCTTGTTGATCAGGCACAGGCGCCCCAGGGT
CAGCAGCAGGCCGGGATCGTTCGGATGTTCCTTGAGCCAACCTTCCGCGGCCTGCAATTGCTTGCCCGGATC
GCGCCCGCGCACCTGCCCGTAGAGTTGCACCAGGGTCGCGTCGAAGCCTTGCTTGAGCGCATGGCGGAGGAC
TTCTTCAGCCTCTTCCTCGGCGCCCAGGCGAAGCAGTTGGGCGGCATAGCCCGCGACGATCGCCGGGTCTGC
ACGCAGCGCCGAAGGCACGTTCTGCCAGCGCTGGGTCAGCGGCTGCAACGCCGTCTCGCCCTCGTTCAGTCC
ACGCTCGCCGGCTTCCTGCAAGGAAGCCACCCAGGCACGGCGTTCGAGGTCGCGCAGTTCGGAATCCTTCAG
CACACGCTCCTTGCGCAGCTCCGGCAGCAGGACGCAAAGGGCCTGCCAGTCGTGCTGGGTGACGTACAGCTG
CTGCATCAGCCGCAATACCGTGCGGTGCTGCGGCTGGAGCCCGTGCAGCTCTTCAAGGGTATTGCGTGCCTG
CGGGTAGTCGCCGCGATTGATCAGCAGTTGCGCACGGGTCAGGCCGACCAGCAATTGGGCGTCCGGCTCGCG
CTCGCGAGCCCGGTTCAGCAGGTCGTCGGCCTCGTCGTAGCGTTCGAGTTCGTTGGCGGCCCGCGCCGCGCC
GAGGTAATGCATCAGCGGCCGCTCGCCCATCTCCGCCGCCCGCCGCAAGTGACGCAGTGCCTGCGGCCAGTT
GCCTTCGCCGAGATCGCGCAGGCCGCTGTGCTCGGCCATCTGCACGCGACGCCGGCGGTTGTAGCGCGACCA
GGGGTTGACCACCCGCCCCGAGCTGCCGAGCAGGCGCAGGACCAGGCGCACCAGCACCACCAGCAGCCAGAC
CACCGCCAGCAGGGCGAGGAACGACCACAGGCTGGATTCGTAACGGAAGCTCTTGTAGGCGATCAGCACATA
GCCGGCCTGCTCGGAGATCGCCAGCCCAACCAGCGTGGCGACCAGCACCACCGCCAGAACCAGGAGGTAGAT
GCGTCTCATGGACGGCCCTCCGTGGCCGGAGCCGCCTGCGCCTCGGGCACCAGGTTGCCAGCGGCCTCGCGG
CGCGACACGTAG