ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6895

TrivialName: PA14_69290

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_69290

PAO1 Ortholog Locus:

Sequence Length: 2025

Protein Length: 674

Start: 6180562

Stop: 6182586

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD14742.1| (AL646062) PROBABLE RIBONUCLEASE E (RNASE E) PROTEIN [Ralstonia solanacearum] Identities = 56/222 (25%), Positives = 81/222 (36%), Gaps = 36/222 (16%)

Sequence:

ATGACGACGGCCAGTATCGCACTGGCCGTCGTGGTTGCGCGATCCCGCTCAGTCGGCGGCGTTGGCCGCCGC
ACGCTGGCGCTCGACGATCCGGCTACGCCCGTAGAGCAGCGCGATGGCCACCAGCGCCATGGCCTGGGCCGA
CAGCGAATAGGCGTCGGCCTTGATCCCCAGCCAGTCGAAGTCGAAGAACGGCACCGGACGGGTGCCGATCAC
CCCGGCTTCCTGCAAGGCGATGACGCCATGTCCGGCGAACACCACCGAGAGCGCACAGAGCAACGCCGCGTT
GATGCTGAAGAACAACCCCAGCGGCAGTTTCGCCGAGCCACGCAGGATCACCCAGGCCAGGCCGATCAGCAG
GACCACGGCGGTCGCCGCGCCGCCGATCACGGCATTGTGCCCGGCCGGTCCGGCCTGCAACCAGAGGGTTTC
GTAGAACAGGATGACCTCGAACAACTCGCGGTAGACCGAGAAGAACGCCAGCACTGCGAAGCCGAAGCGTCC
ACCACCGCCCACCAGGCTGCTGCGGATGTAGTCCTGCCAGGCTGCCGCGTGGCGGCGGTCGTGCATCCAGAC
GCCGAGCCAGAGCACCATCACGCAGGCGAACAGCGAGGTGAAGCCCTCCATCAGCTCGCGCTGGGCACCGCC
GATATCGATCACATAGGCGGCCAACGCCCAGGTGGCGAAGCCGGCGACGAAGGCCAGCCCCCAGCCGACGTG
CACGCCACGCACGGCACTTTCCTGCCCGGTATTGCGCAAGAAGCCGAGGATGGCGGCAAGCACCAGGATTGC
CTCTACCCCTTCGCGCAACAGGATCAACAGGGCGGAAACGAAACTGATGGAGAAACTCAGCGAGTCGCCGCC
AAGCTGCTTGGCGGCCTCCGCCAGCTTGCCCTTGGCCAGCTCCAGCTGTTGCGCCACCTGGGTTTCCGGGAG
GCCATCGCGCAACGCCTGGCGGTAGGCCATCAGTTGCTTCTCGGTGGAGCGGCGCAAATTGGCGTCGACGTT
GTCCAGCGAGCTTTCCACCAGCTCGAAGCCTTCCAGGTAGGCCGCCACCGACAGGTCGTAGGCCTGGTCGCG
GTCACCTTCGCGATAGACCGCGAAACTCTTGTCCAGGGTGGCGGCGGTATAGTCGATCAACTGCCCAGGACC
GCGCTGCTCCAGCGGCGGATGCGCACGCAGGGCGCGGAAGCTCTCCGCAGCGGCCTCGCCGTCGTGCTCGGC
GACTTCGGCCGGAGTCTGCGTGGCCAGGGTCGCCAGCGGGTAGGCATGGGCCTTGTCCGGCTGCGCACTGCC
GGCGCTCAGGCCGGCCACATAGCTGGCCAGGTCCCAGCGCTGGCGTTCGTCGAGCTGGTCGGCGAACGCCGG
CATGTCGGTGCCGGCCACGCCCAGGCCAATGACGTTACGCAGGTCGTAGAGGCTCAGGTGGTCGAGGCGCTG
GCGATCGGTGAGGTTCGCCGGCGGCGGTTCCAGGCCGATGCCGGCGGGGCCGTCGCCCTTGCCCGCATCGCC
ATGGCAGATCGCGCACTGCTGGGCATAGATCGGCGCTGCGCGGCTCGGGTCGGGGGTGATCGCGGGGGTCTG
CACCACCTGGTAGATATCCGCCACCCGTGCCTCGAGGTTGCGCGCCTGGAGGGCCACGTCCCTTCCCGGCAA
GCGCTGCTCGATGGCCTGGCGCAGGCTGGCGACCCCCCTCTCCAGCTCGGCGCGCTCGGGGCGCATCGGCAG
GGTCAGGACCAATGCCTGCAGGTTGCCAACGAACTCCACCTGTTCCTGGTATTCGCTGGGGTCGACGATCTT
GCCGTCAGCCACGGTCGGCGGATAGTCGGCCGCCAGGTAACTCAACAGATGCAAGGCTTGGGAGGGGTCGAC
GGCCGTGTCGGCAATAGCTCCAAGGCTGAACGCGCAGACCAGCGGCAGCAGCCACAGCAGGATTTTCGGAGG
GTGCATGGCGAAGACGAAGTGAGAATGGAAGAGATTAAATTGTCCCTTCGCCTTCCCGCCCATGCAAGAAAT
ACTCTGTAA

Translation:

MTTASIALAVVVARSRSVGGVGRRTLALDDPATPVEQRDGHQRHGLGRQRIGVGLDPQPVEVEERHRTGADH
PGFLQGDDAMSGEHHRERTEQRRVDAEEQPQRQFRRATQDHPGQADQQDHGGRRAADHGIVPGRSGLQPEGF
VEQDDLEQLAVDREERQHCEAEASTTAHQAAADVVLPGCRVAAVVHPDAEPEHHHAGEQRGEALHQLALGTA
DIDHIGGQRPGGEAGDEGQPPADVHATHGTFLPGIAQEAEDGGKHQDCLYPFAQQDQQGGNETDGETQRVAA
KLLGGLRQLALGQLQLLRHLGFREAIAQRLAVGHQLLLGGAAQIGVDVVQRAFHQLEAFQVGRHRQVVGLVA
VTFAIDRETLVQGGGGIVDQLPRTALLQRRMRTQGAEALRSGLAVVLGDFGRSLRGQGRQRVGMGLVRLRTA
GAQAGHIAGQVPALAFVELVGERRHVGAGHAQANDVTQVVEAQVVEALAIGEVRRRRFQADAGGAVALARIA
MADRALLGIDRRCAARVGGDRGGLHHLVDIRHPCLEVARLEGHVPSRQALLDGLAQAGDPPLQLGALGAHRQ
GQDQCLQVANELHLFLVFAGVDDLAVSHGRRIVGRQVTQQMQGLGGVDGRVGNSSKAERADQRQQPQQDFRR
VHGEDEVRMEEIKLSLRLPAHARNTL*

AnnotationID:6896 GeneID:6895

AnnotatorUID: diggins

Modification Date/Time: 2005-03-16 07:07:11

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13490

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30870