ViewGene

Locus Name:
GeneID:
Location:

GeneID:6893
TrivialName: PA14_69180
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_69180
PAO1 Ortholog Locus:
Sequence Length:1476
Protein Length:491
Start: 6171024
Stop: 6172499
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGAAAAAAGGCGCTCCGGTCAAACCGGAGCGCCTTCTTCAATTCCCTGGAAGACTACTTCCGTTTCATCGA
ATCGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGATGAGGAATTCGATCGCGGAGATCTCGTC
CATCGGGTGCAGGATCTTGCGCAGGATCCACATGCGCTGGAGCTCGTCCTCGCTGGTCAGCAGCTCTTCGCG
GCGGGTACCCGAACGGTTGATGTTGATGGCCGGGAACACGCGCTTCTCGGCGATCTTGCGATCCAATGGGAG
TTCCATGTTGCCGGTACCCTTGAATTCCTCGTAGATCACCTCGTCCATCTTCGAGCCGGTTTCCACCAACGC
CGTGGCGAGAATCGTAAGAGAACCGCCCTCTTCGATGTTCCGCGCGGCGCCGAAGAAGCGCTTCGGCTTCTC
CAGGGCATGGGCGTCGACACCGCCGGTGAGCACCTTGCCGGAGCTGGGGATCACGGTGTTGTAGGCCCGCGC
CAGACGGGTGATGGAGTCGAGCAGGATGACCACGTCCTTCTTGTGCTCGACCAGGCGCTTGGCCTTCTCGAT
CACCATCTCGGCGACCTGTACGTGACGGGTCGGCGGTTCGTCAAAGGTCGAGGCGACCACTTCGCCGCGCAC
GGTGCGCTGCATTTCGGTCACTTCCTCAGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCATTCGGGGTT
GTTGCGGGTGATGTTGCTGGCGATGTTCTGCAGCATGATGGTCTTGCCCGCCTTCGGCGGCGCCACGATCAG
GCCGCGCTGGCCCTTGCCGATCGGCGCGCAGAGGTCGATGACGCGGCCGGTCAGGTCTTCGGTGGAGCCGTT
GCCGGCTTCCATCTTCATCCGCTCGTTGGGGAACAGCGGCGTCAGGTTCTCGAAGAGAATCTTGTTCTTCGC
ATTCTCCGGACGATCGAAGTTGATCGAGTCGACCTTGAGCAGGGCGAAGTAGCGTTCGCCCTCTTTCGGCGG
CCGGATCTTGCCGATGATGGTGTCGCCCGTGCGCAGGTTGAAGCGCCGGATCTGGCTCGGCGAGACATAGAT
GTCGTCGGGGCCGGCCAGGTAGGAAGAGTCGGCGGAGCGCAGGAAGCCGAAGCCGTCCTGAAGAATCTCCAG
CACGCCATCGCCGGAGATCTCTTCACCACTTTTCGCGTGCTTCTTCAGCAGGGCGAAGATGATGTCCTGCTT
GCGCGAACGGGCCATGTTTTCCAGGCCCATGGCATCGGACATTTCCAGCAGTTCGGCAATCGGCTTTTGCTT
GAGTTCGGTCAGATTCATAGGAAAGAGATAGGTACGCAGAAAGAGGAATTGGAGAAAGCGTCGAGCTTGGGA
AAGCCGTGTCGCAAGGGGGCGACAGGAGCGCTAGAAAGTTCGAGTAGGAAGTGCGTCCGGGACGGCATGCAG
AAGGCGACGGAAAAAACGTCGCGAACCCGAATTTAA
Translation:
MKKGAPVKPERLLQFPGRLLPFHRIEELIVGLGLLELVDEEFDRGDLVHRVQDLAQDPHALELVLAGQQLFA
AGTRTVDVDGREHALLGDLAIQWEFHVAGTLEFLVDHLVHLRAGFHQRRGENRKRTALFDVPRGAEEALRLL
QGMGVDTAGEHLAGAGDHGVVGPRQTGDGVEQDDHVLLVLDQALGLLDHHLGDLYVTGRRFVKGRGDHFAAH
GALHFGHFLRALVDQQDDQVAFGVVAGDVAGDVLQHDGLARLRRRHDQAALALADRRAEVDDAAGQVFGGAV
AGFHLHPLVGEQRRQVLEENLVLRILRTIEVDRVDLEQGEVAFALFRRPDLADDGVARAQVEAPDLARRDID
VVGAGQVGRVGGAQEAEAVLKNLQHAIAGDLFTTFRVLLQQGEDDVLLARTGHVFQAHGIGHFQQFGNRLLL
EFGQIHRKEIGTQKEELEKASSLGKPCRKGATGALESSSRKCVRDGMQKATEKTSRTRI*
AnnotationID:6894GeneID:6893
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 06:06:20
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13486
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30866
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49895How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5434711Stop: 5436186
Length: 1476
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAAAAAAGGCGCTCCGGTCAAACCGGAGCGCCTTCTTCAATTCCCTGGAAGACTACTTCCGTTTCATCGA
ATCGAAGAACTCATCGTTGGTCTTGGTCTGCTTGAGCTTGTCGATGAGGAATTCGATCGCGGAGATCTCGTC
CATCGGGTGCAGGATCTTGCGCAGGATCCACATGCGCTGGAGCTCGTCCTCGCTGGTCAGCAGCTCTTCGCG
GCGGGTACCCGAACGGTTGATGTTGATGGCCGGGAACACGCGCTTCTCGGCGATCTTGCGATCCAATGGGAG
TTCCATGTTGCCGGTACCCTTGAATTCCTCGTAGATCACCTCGTCCATCTTCGAGCCGGTTTCCACCAACGC
CGTGGCGAGAATCGTAAGAGAACCGCCCTCTTCGATGTTCCGCGCGGCGCCGAAGAAGCGCTTCGGCTTCTC
CAGGGCATGGGCGTCGACACCGCCGGTGAGCACCTTGCCGGAGCTGGGGATCACGGTGTTGTAGGCCCGCGC
CAGACGGGTGATGGAGTCGAGCAGGATGACCACGTCCTTCTTGTGCTCGACCAGGCGCTTGGCCTTCTCGAT
CACCATCTCGGCGACCTGTACGTGACGGGTCGGCGGTTCGTCAAAGGTCGAGGCGACCACTTCGCCGCGCAC
GGTGCGCTGCATTTCGGTCACTTCCTCAGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCATTCGGGGTT
GTTGCGGGTGATGTTGCTGGCGATGTTCTGCAGCATGATGGTCTTGCCCGCCTTCGGCGGCGCCACGATCAG
GCCGCGCTGGCCCTTGCCGATCGGCGCGCAGAGGTCGATGACGCGGCCGGTCAGGTCTTCGGTGGAGCCGTT
GCCGGCTTCCATCTTCATCCGCTCGTTGGGGAACAGCGGCGTCAGGTTCTCGAAGAGAATCTTGTTCTTCGC
ATTCTCCGGACGATCGAAGTTGATCGAGTCGACCTTGAGCAGGGCGAAGTAGCGTTCGCCCTCTTTCGGCGG
CCGGATCTTGCCGATGATGGTGTCGCCCGTGCGCAGGTTGAAGCGCCGGATCTGGCTCGGCGAGACATAGAT
GTCGTCGGGGCCGGCCAGGTAGGAAGAGTCGGCGGAGCGCAGGAAGCCGAAGCCGTCCTGAAGAATCTCCAG
CACGCCATCGCCGGAGATCTCTTCACCACTTTTCGCGTGCTTCTTCAGCAGGGCGAAGATGATGTCCTGCTT
GCGCGAACGGGCCATGTTTTCCAGGCCCATGGCATCGGACATTTCCAGCAGTTCGGCAATCGGCTTTTGCTT
GAGTTCGGTCAGATTCATAGGAAAGAGATAGGTACGCAGAAAGAGGAATTGGAGAAAGCGTCGAGCTTGGGA
AAGCCGTGTCGCAAGGGGGCGACAGGAGCGCTAGAAAGTTCGAGTAGGAAGTGCGTCCGGGACGGCATGCAG
AAGGCGACGGAAAAAACGTCGCGAACCCGAATTTAA