ViewGene

Locus Name:
GeneID:
Location:

GeneID:6891
TrivialName: PA14_69120
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_69120
PAO1 Ortholog Locus:
Sequence Length:1299
Protein Length:432
Start: 6166352
Stop: 6165054
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGTCCACCGTGTAGCCGACCAGGGCGTTGGCTGCCACCGAGCCGCCGAGGTAGCCGAACAGACCGGTGAA
GCCGGCGGCGGTGCCGGCCGCTTTCTTCGGCGCCAGCTCCAGGGCCTGCAAGCCGATCAGCATCACCGGGCC
GTAGATCAGGAAGCCGATCATGATCAGCGCGGCCATGTCGATCGCCGGGTTGCCGGCCGGGTTCAGCCAGTA
GATCAGGGTGCCGACGGTCACCAGGATCATGAACACCACGCCGGTGGCGCCGCGATTGCCCTTGAACAGCTT
GTCCGACAGCCAGCCGCAGAGCAGGGTGCCGGGAATCCCCGCCCATTCGTAGAAGAAGTACGCCCAGGACGA
CTTGTCGACGTTGAAGTGCTTGGCCTCCTTGAGGTAGGTCGGCGCCCAGTCGAGCACACCGTAGCGCAGCAG
GTAGACGAACACGTTGGCCAGGGCGATGTACCAGAGCAGCTTGTTGCGCAGCACGTAGGTGACGAAGATCTC
CTTGGTCGACAGCTCGCGCTCGTGGTGTTCGTCGTAGCCTTCGGGGTAGTCGTCCTTATGCTTCTCGATCGG
CGGCAGGCCGCAGGACTGCGGGGTGTCGCGCATGGCGAAATAGGCGAACACGGCTACGCCCACGGCGACGAT
GGCCGGCACGTAGAAGGCCGAGCGCCAGTCGCCGAACAGCGCCAGGCCGAGCAGGAACAGCGGGCCGATCAG
GCCGCCGCCGACATTGTGGGCGACGTTCCACACCGAGACCACGCTGCCGCGCTCCTTCTGCGACCACCAGTG
GACCATGGTCCGTCCGCTCGGCGGCCAGCCCATGCCCTGGGCCCAGCCGTTAATGAAGAGCAGGACGAACAT
GATGGCGACGCTGGAGGTAGCCCAGTGCGCGAATCCGAAAATGAACATCACCGCCGCCGACACCAACAGGCC
GAACGGCAGGAAGACCCGTGGGTTGGAACGGTCCGAGACCAGGCCCATGATGAATTTCGACAGGCCGTAGGC
GATGGCGATGGCCGACATCGCGACGCCCAGCTGGCCGCGACTGTAGCCGTCCTCGATGAGGTAGGGCATGGC
CAGGGAGAAGTTCTTGCGCAGCAGGTAGTAACCCGCGTAGCCGATGAAGATACCGGCGAAGATCTGCCAGCG
CAGGCGCCGGTAGGTGCTGTCCACCTCGGCATCGGGCAGTGGCGCCTGGTGTGGCGCGGGACGAAAGATTCC
GAACATCGCGAGCTCCGCTTGTTGTTGTGTCGCGCCTTTTTACGCGGTTGCGAACACTACATTTTTCGTAAA
TGA
Translation:
MVHRVADQGVGCHRAAEVAEQTGEAGGGAGRFLRRQLQGLQADQHHRAVDQEADHDQRGHVDRRVAGRVQPV
DQGADGHQDHEHHAGGAAIALEQLVRQPAAEQGAGNPRPFVEEVRPGRLVDVEVLGLLEVGRRPVEHTVAQQ
VDEHVGQGDVPEQLVAQHVGDEDLLGRQLALVVFVVAFGVVVLMLLDRRQAAGLRGVAHGEIGEHGYAHGDD
GRHVEGRAPVAEQRQAEQEQRADQAAADIVGDVPHRDHAAALLLRPPVDHGPSARRPAHALGPAVNEEQDEH
DGDAGGSPVRESENEHHRRRHQQAERQEDPWVGTVRDQAHDEFRQAVGDGDGRHRDAQLAATVAVLDEVGHG
QGEVLAQQVVTRVADEDTGEDLPAQAPVGAVHLGIGQWRLVWRGTKDSEHRELRLLLCRAFLRGCEHYIFRK
*
AnnotationID:6892GeneID:6891
AnnotatorUID: diggins
Modification Date/Time: 2005-03-16 06:06:57
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16639
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30862
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49893How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5430039Stop: 5428741
Length: 1299
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTCCACCGTGTAGCCGACCAGGGCGTTGGCTGCCACCGAGCCGCCGAGGTAGCCGAACAGACCGGTGAA
GCCGGCGGCGGTGCCGGCCGCTTTCTTCGGCGCCAGCTCCAGGGCCTGCAAGCCGATCAGCATCACCGGGCC
GTAGATCAGGAAGCCGATCATGATCAGCGCGGCCATGTCGATCGCCGGGTTGCCGGCCGGGTTCAGCCAGTA
GATCAGGGTGCCGACGGTCACCAGGATCATGAACACCACGCCGGTGGCGCCGCGATTGCCCTTGAACAGCTT
GTCCGACAGCCAGCCGCAGAGCAGGGTGCCGGGAATCCCCGCCCATTCGTAGAAGAAGTACGCCCAGGACGA
CTTGTCGACGTTGAAGTGCTTGGCCTCCTTGAGGTAGGTCGGCGCCCAGTCGAGCACACCGTAGCGCAGCAG
GTAGACGAACACGTTGGCCAGGGCGATGTACCAGAGCAGCTTGTTGCGCAGCACGTAGGTGACGAAGATCTC
CTTGGTCGACAGCTCGCGCTCGTGGTGTTCGTCGTAGCCTTCGGGGTAGTCGTCCTTATGCTTCTCGATCGG
CGGCAGGCCGCAGGACTGCGGGGTGTCGCGCATGGCGAAATAGGCGAACACGGCTACGCCCACGGCGACGAT
GGCCGGCACGTAGAAGGCCGAGCGCCAGTCGCCGAACAGCGCCAGGCCGAGCAGGAACAGCGGGCCGATCAG
GCCGCCGCCGACATTGTGGGCGACGTTCCACACCGAGACCACGCTGCCGCGCTCCTTCTGCGACCACCAGTG
GACCATGGTCCGTCCGCTCGGCGGCCAGCCCATGCCCTGGGCCCAGCCGTTAATGAAGAGCAGGACGAACAT
GATGGCGACGCTGGAGGTAGCCCAGTGCGCGAATCCGAAAATGAACATCACCGCCGCCGACACCAACAGGCC
GAACGGCAGGAAGACCCGTGGGTTGGAACGGTCCGAGACCAGGCCCATGATGAATTTCGACAGGCCGTAGGC
GATGGCGATGGCCGACATCGCGACGCCCAGCTGGCCGCGACTGTAGCCGTCCTCGATGAGGTAGGGCATGGC
CAGGGAGAAGTTCTTGCGCAGCAGGTAGTAACCCGCGTAGCCGATGAAGATACCGGCGAAGATCTGCCAGCG
CAGGCGCCGGTAGGTGCTGTCCACCTCGGCATCGGGCAGTGGCGCCTGGTGTGGCGCGGGACGAAAGATTCC
GAACATCGCGAGCTCCGCTTGTTGTTGTGTCGCGCCTTTTTACGCGGTTGCGAACACTACATTTTTCGTAAA
TGA