ViewGene

Locus Name:
GeneID:
Location:

GeneID:6881
TrivialName: PA14_68590
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_68590
PAO1 Ortholog Locus:
Sequence Length:1458
Protein Length:485
Start: 6116870
Stop: 6118327
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCTCGGTTTCCGCGCCGATCAGCGCGCCGCTCTGGATCGCCGCGATCACGCCACGGGTGGTCGGGATGTT
GAAGCGCTTGCCGACGCCGTAGCCACCGCCGGTCCAGCCGGTGTTGACCAGGTAGACCTTGGAGCCGAAGGC
CTTGATACGCTTGATCAGCAGCTCGGCGTAGACACCGGCCGGACGCGGGAAGAAGGGAGCGCCGAAGCAGGT
GGAGAAGGTCGACTTGATGCCGCCGCCGGAACCCATCTCGGTGGAGCCGACCAGCGCGGTGTAGCCGGACAG
GAAGTGGTAGGCCGCCTGCTCGTTGTTCAGGATCGATACCGGCGGCAGTACGCCGGTCAGGTCGCAGGTCAG
GAAGATCACCGCGTTGGGCTCGCCGCCGAGGTTCTTCTCCGAACGCTTCTCGACGTGCTCCAGCGGGTAGGC
GGCGCGGCTGTTCTGGGTCAGGCTGTCATCGGCGTAGTTGGGCACGCGCTCTTCGTCGAGAACCACGTTCTC
CAGCACGGCGCCGAACTTGATGGCTTTCCAGATGACCGGCTCGTTCTTCTCGGACAGGTCGATGCACTTGGC
ATAGCAACCGCCTTCGACGTTGAACACCACGCCCTCGCCCCAGCCGTGCTCGTCGTCACCGATCAGGTAACG
GCTTTCATCAGCGGACAGGGTGGTCTTGCCGGTGCCGGACAGGCCGAAGAACAGGGTCACATCGCCCGCTTC
GCCGATGTTGGCAGCGCAGTGCATCGGCAGCACGTCGCGCTCGGGCAGCAGGAAGTTCTGCACGGAGAACAT
GGCTTTCTTCATCTCGCCGGCATAGCGCATGCCTGCGATCAGCACTTTCTTCTGGGCGAAATTGAGGATCAC
GCAACCGTCGGAGTTGGTGCCGTCGCGCTCGGGCACGCATTCGAAGTTGGCGACATTGAGGACCTGCCACTC
GTCCTTGCCGGCCGGGTTGTACTGCTCCGGCTCGATGAACAGGCAACGGCCGAACAGATTCTGCCAGGCGGT
AGCGGTGGTCATCTTCACCGGCAGGTAGTAAGCCTCGGCGGAACCTACATGAACATGGGAAACGAAATGGTC
CTGGGCGTTGTTGAACGCTTCCACGCGGGCCCACAGCGCATCGAACTTGTCGGCCGGGAACGGACGGTTGAT
GTTGCCCCAGGCGATCGCGTCCTTGGTGCTCGGCTCTTCGACGATGAAACGGTCGACCGGCGAACGGCCGGT
GCGATGGCCGGTGCGTACGACCAGCGAGCCGTTGGCGGCCAGTTCGCCCTCACCGCGGCGAATGGCTTCTTC
TACCAGTTGGGCGGCGCTGATATCGGTGTACACGGCGTTGTTGGCTTGCGTCATGTGGTTCCCCGTCGGCCA
GAGGCCGAGTCCTCCAAACTTCGTAGCGCTTCAAAAAACTCACTACAGGAAAAAAGTGGCGGGATTATGCCA
GAAAAGCCCGCTGGATGA
Translation:
MLGFRADQRAALDRRDHATGGRDVEALADAVATAGPAGVDQVDLGAEGLDTLDQQLGVDTGRTREEGSAEAG
GEGRLDAAAGTHLGGADQRGVAGQEVVGRLLVVQDRYRRQYAGQVAGQEDHRVGLAAEVLLRTLLDVLQRVG
GAAVLGQAVIGVVGHALFVENHVLQHGAELDGFPDDRLVLLGQVDALGIATAFDVEHHALAPAVLVVTDQVT
AFISGQGGLAGAGQAEEQGHIARFADVGSAVHRQHVALGQQEVLHGEHGFLHLAGIAHACDQHFLLGEIEDH
ATVGVGAVALGHAFEVGDIEDLPLVLAGRVVLLRLDEQATAEQILPGGSGGHLHRQVVSLGGTYMNMGNEMV
LGVVERFHAGPQRIELVGRERTVDVAPGDRVLGARLFDDETVDRRTAGAMAGAYDQRAVGGQFALTAANGFF
YQLGGADIGVHGVVGLRHVVPRRPEAESSKLRSASKNSLQEKSGGIMPEKPAG*
AnnotationID:6882GeneID:6881
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 17:05:03
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits at any threshold.
Genomic Context:
Comment:
ReferenceID:16633
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30842
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49883How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5380556Stop: 5382013
Length: 1458
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCTCGGTTTCCGCGCCGATCAGCGCGCCGCTCTGGATCGCCGCGATCACGCCACGGGTGGTCGGGATGTT
GAAGCGCTTGCCGACGCCGTAGCCACCGCCGGTCCAGCCGGTGTTGACCAGGTAGACCTTGGAGCCGAAGGC
CTTGATACGCTTGATCAGCAGCTCGGCGTAGACACCGGCCGGACGCGGGAAGAAGGGAGCGCCGAAGCAGGT
GGAGAAGGTCGACTTGATGCCGCCGCCGGAACCCATCTCGGTGGAGCCGACCAGCGCGGTGTAGCCGGACAG
GAAGTGGTAGGCCGCCTGCTCGTTGTTCAGGATCGATACCGGCGGCAGTACGCCGGTCAGGTCGCAGGTCAG
GAAGATCACCGCGTTGGGCTCGCCGCCGAGGTTCTTCTCCGAACGCTTCTCGACGTGCTCCAGCGGGTAGGC
GGCGCGGCTGTTCTGGGTCAGGCTGTCATCGGCGTAGTTGGGCACGCGCTCTTCGTCGAGAACCACGTTCTC
CAGCACGGCGCCGAACTTGATGGCTTTCCAGATGACCGGCTCGTTCTTCTCGGACAGGTCGATGCACTTGGC
ATAGCAACCGCCTTCGACGTTGAACACCACGCCCTCGCCCCAGCCGTGCTCGTCGTCACCGATCAGGTAACG
GCTTTCATCAGCGGACAGGGTGGTCTTGCCGGTGCCGGACAGGCCGAAGAACAGGGTCACATCGCCCGCTTC
GCCGATGTTGGCAGCGCAGTGCATCGGCAGCACGTCGCGCTCGGGCAGCAGGAAGTTCTGCACGGAGAACAT
GGCTTTCTTCATCTCGCCGGCATAGCGCATGCCTGCGATCAGCACTTTCTTCTGGGCGAAATTGAGGATCAC
GCAACCGTCGGAGTTGGTGCCGTCGCGCTCGGGCACGCATTCGAAGTTGGCGACATTGAGGACCTGCCACTC
GTCCTTGCCGGCCGGGTTGTACTGCTCCGGCTCGATGAACAGGCAACGGCCGAACAGATTCTGCCAGGCGGT
AGCGGTGGTCATCTTCACCGGCAGGTAGTAAGCCTCGGCGGAACCTACATGAACATGGGAAACGAAATGGTC
CTGGGCGTTGTTGAACGCTTCCACGCGGGCCCACAGCGCATCGAACTTGTCGGCCGGGAACGGACGGTTGAT
GTTGCCCCAGGCGATCGCGTCCTTGGTGCTCGGCTCTTCGACGATGAAACGGTCGACCGGCGAACGGCCGGT
GCGATGGCCGGTGCGTACGACCAGCGAGCCGTTGGCGGCCAGTTCGCCCTCACCGCGGCGAATGGCTTCTTC
TACCAGTTGGGCGGCGCTGATATCGGTGTACACGGCGTTGTTGGCTTGCGTCATGTGGTTCCCCGTCGGCCA
GAGGCCGAGTCCTCCAAACTTCGTAGCGCTTCAAAAAACTCACTACAGGAAAAAAGTGGCGGGATTATGCCA
GAAAAGCCCGCTGGATGA