ViewGene

Locus Name:
GeneID:
Location:

GeneID:6863
TrivialName: PA14_67800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67800
PAO1 Ortholog Locus:
Sequence Length:1227
Protein Length:408
Start: 6055613
Stop: 6054387
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 123/441 (27%), Positives = 161/441 (36%), Gaps = 86/441 (19%)
Sequence:
GTGGCCCTGCAGGTCGGCTTCCTTGAAGCCCTCGAAGCTGCTCCGCTCCTGGGTCACCTTGGCGCGTCCGAC
CTCGATGTCCGGAACGATGCCCTGGGCCTGGATGGAGCGCCCGTTGGGGGTGTAGTAGAGCGCGGTGGTGAG
CTTCAGGGCGCGGTCGTTGTTCAGCGGCAGCACGGTCTGCACCGAGCCCTTGCCGAAGCTGTCGGTGCCCAT
CAGGATCGCGCGCTTCTGGTCCTGCAGGGCACCGGCGACGATTTCCGCCGCCGAGGCGCTGCCACCGTTGAT
CAGTACCACCAGCGGAACTTTGTCGCTGGGATCGGCCGGGTCGGCGCTGAAGCGCAGCTCGGAGTTGGCGAT
GCGGCCCTTGGTGTAGACGATCAGGCCCTTGGTGAGGAAGGCGTCGGCTACCTCGACGGCGGACTGCAGCAC
GCCGCCGGGGTTGTTGCGCAGGTCCAGGACCAGGCCCTTGAGACGGCCCTTGTTGTCCTTGCGCAGCTGGTT
CAGCGCCTTGACCACTTCCTCGCCGGTGTTGACCTGGAACTGGGTGATGCGCAGGTAGGCGTAGCCGGGTTC
GAGGACCTGGCTCTTGACGCTCTTGACCTTGATGATGGCGCGCTTGAGTTCGACGTCGAACGGTCTGCCGCC
ATCGCGGACGATGGTCAGGGTGATCGGGGAGCCGGCCTTGCCGCGCATGCTGTCGACCGCTTCGGTCATCGA
CTGGCCCTTGGTCGGCTTGCCATCGATCTGCACGATCAGGTCGCCGGGCTGGATGCCGGCGCGGGCCGCGGG
GGTGTCGTCGATCGGCGAGACCACCTTGATGAAGCCGTCTTCGCTGCCGACCTCGATGCCCAGGCCGCCGAA
CTCGCCGCTGGTGCTTTCCTGCAGCTCGGCGAAGTCCTCCGGGCCGAGGTAGGCGGAGTGCGGGTCGAGGTT
GCTGAGCATGCCCTTGATGGCGTTCTCCAGCAGGGTCTTGTCGTCCACTGGCTCGACATAGGCGGCCTTCAC
CCGGTCGAGAACCTCGGCGAAGGTACGCAGCTCGTCGAGGGGCAGCGGGGCACTGCTACCGTTGGCCAGTGG
CGCGGCGTCGGCCGGGGCGTCGGCAGCCTGGGCCGCGCCCGCGCCGAGCAGCAGGGCCAGCGCCAGGGTGGT
GGGACGGAAGCAATGCAGCATGTTCAGCTCCTAATCACGAGTTCGGCGCCTATCCCTGCGCGCGGCACCAGG
TAG
Translation:
MALQVGFLEALEAAPLLGHLGASDLDVRNDALGLDGAPVGGVVERGGELQGAVVVQRQHGLHRALAEAVGAH
QDRALLVLQGTGDDFRRRGAATVDQYHQRNFVAGIGRVGAEAQLGVGDAALGVDDQALGEEGVGYLDGGLQH
AAGVVAQVQDQALETALVVLAQLVQRLDHFLAGVDLELGDAQVGVAGFEDLALDALDLDDGALEFDVERSAA
IADDGQGDRGAGLAAHAVDRFGHRLALGRLAIDLHDQVAGLDAGAGRGGVVDRRDHLDEAVFAADLDAQAAE
LAAGAFLQLGEVLRAEVGGVRVEVAEHALDGVLQQGLVVHWLDIGGLHPVENLGEGTQLVEGQRGTATVGQW
RGVGRGVGSLGRARAEQQGQRQGGGTEAMQHVQLLITSSAPIPARGTR*
AnnotationID:6864GeneID:6863
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 12:12:08
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16617
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30809
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49865How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5319298Stop: 5318072
Length: 1227
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCCCTGCAGGTCGGCTTCCTTGAAGCCCTCGAAGCTGCTCCGCTCCTGGGTCACCTTGGCGCGTCCGAC
CTCGATGTCCGGAACGATGCCCTGGGCCTGGATGGAGCGCCCGTTGGGGGTGTAGTAGAGCGCGGTGGTGAG
CTTCAGGGCGCGGTCGTTGTTCAGCGGCAGCACGGTCTGCACCGAGCCCTTGCCGAAGCTGTCGGTGCCCAT
CAGGATCGCGCGCTTCTGGTCCTGCAGGGCACCGGCGACGATTTCCGCCGCCGAGGCGCTGCCACCGTTGAT
CAGTACCACCAGCGGAACTTTGTCGCTGGGATCGGCCGGGTCGGCGCTGAAGCGCAGCTCGGAGTTGGCGAT
GCGGCCCTTGGTGTAGACGATCAGGCCCTTGGTGAGGAAGGCGTCGGCTACCTCGACGGCGGACTGCAGCAC
GCCGCCGGGGTTGTTGCGCAGGTCCAGGACCAGGCCCTTGAGACGGCCCTTGTTGTCCTTGCGCAGCTGGTT
CAGCGCCTTGACCACTTCCTCGCCGGTGTTGACCTGGAACTGGGTGATGCGCAGGTAGGCGTAGCCGGGTTC
GAGGACCTGGCTCTTGACGCTCTTGACCTTGATGATGGCGCGCTTGAGTTCGACGTCGAACGGTCTGCCGCC
ATCGCGGACGATGGTCAGGGTGATCGGGGAGCCGGCCTTGCCGCGCATGCTGTCGACCGCTTCGGTCATCGA
CTGGCCCTTGGTCGGCTTGCCATCGATCTGCACGATCAGGTCGCCGGGCTGGATGCCGGCGCGGGCCGCGGG
GGTGTCGTCGATCGGCGAGACCACCTTGATGAAGCCGTCTTCGCTGCCGACCTCGATGCCCAGGCCGCCGAA
CTCGCCGCTGGTGCTTTCCTGCAGCTCGGCGAAGTCCTCCGGGCCGAGGTAGGCGGAGTGCGGGTCGAGGTT
GCTGAGCATGCCCTTGATGGCGTTCTCCAGCAGGGTCTTGTCGTCCACTGGCTCGACATAGGCGGCCTTCAC
CCGGTCGAGAACCTCGGCGAAGGTACGCAGCTCGTCGAGGGGCAGCGGGGCACTGCTACCGTTGGCCAGTGG
CGCGGCGTCGGCCGGGGCGTCGGCAGCCTGGGCCGCGCCCGCGCCGAGCAGCAGGGCCAGCGCCAGGGTGGT
GGGACGGAAGCAATGCAGCATGTTCAGCTCCTAATCACGAGTTCGGCGCCTATCCCTGCGCGCGGCACCAGG
TAG