ViewGene

Locus Name:
GeneID:
Location:

GeneID:6857
TrivialName: PA14_67570
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67570
PAO1 Ortholog Locus:
Sequence Length:1554
Protein Length:517
Start: 6036919
Stop: 6038472
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCTGCCGCCGAACAAGCCCGGCTGCTTAAGCCGGACGATAAACACGCACATTGGTGTGCCCCTCGTTGAG
CAGATGATGGGCATGCAGGCGGCTCATCACCCCTTTGTCGCAATACAGGAGGTACTGGCGGTTGGCGTCCAG
TTCCTTGAAGCGGCTGTTGATCGCGTAGAACGGCAGCGCCTGGACTTCGACGCCTTCCAGGGCCAGGGGTTC
GTCTTCCTGGGCATCAGGATGGCGGATATCGATGACAATCTGACCGGGCAGCACCTCGCCGACCTCTTCCAC
CTGCAGGTCCTGGCCGAGTTCGTCGATCACCCGGTCGACGGTGCGCTGGGTGGCGCGCTCCAGGGCGCGCTC
GAGCACCGCCATGTCGAATTTCGACTCTTCGTGCTCGACGCGGTAGGGCTTGGCCTGGGTGGTCGGGTTCAC
CGAGATCACCCCGCAGTATTCCGGCATGTGCCGGGCGAACTCGGCGGTGCCGATCTGCCGGGCGGTGTCGAT
GATGTCCTGCTTGTGGCTGACGATCAGCGGGCGCAGCACCAGGGTGTCGGTAACCCGGTCGATCACCGAGAG
GTTCGGCAGGGTCTGGCTGGACACCTGGGAGATCGCCTCGCCGGTCACCAGCGCGTCCAGCTCCAGGCGCTC
GGCCACGCGGCTGGCGGCGCGCAGCATCATGCGCTTGAGGGTCACGCCCATATAGCTGTCGTCGACCTTGGT
GAGGATCTCGCCGACCACTTCCTCGAACGGCACGCTGATGAACAGCACGCGCTGCGAGCGGCCGTACTTCTC
CCACAGGTAGTGGGCGACTTCCATCACCCCCAGTTCGTGGGCGCGCCCGCCGAGGTTGAAGAACACGAAGTG
GCTGATCATCCCGCGGCGCATCATCTGGTAGGCCGCCACGGTCGAGTCGAAGCCGCCGGACATCAGCACCAG
CACCTGTTCCAGCGCGCCCAGCGGATAGCCGCCCAGGCCCGGATGCTGGCGATGGATGACGAACAGGCGGTC
GAGGCGGATTTCCATCCGCACCTCGACTTCCGGCTGCTTCAGGTCGATCCCGGCAGCCCCGCATTCGCGGCG
CAGGCCGCTGCCGACGTAACGCTCCACCTCCATCGAGGTGAACGCGTGCTTGCCGGCGCGCTTGCAGCGCAC
GGCGAAGGTCTTGCCGGCCAACTGGTCGCCGAAATGCGCCTTGCACTTGGCGAGGATGTCGTCGAAATCGCC
CAGCGGATACTCGTGGACCTCGAGGAAATGACCGATGCCCGGGGTGCAGGTCAGGCGCTCGATCATTTCGCG
CCTGACCTTGGCGTCGACCACGGCGGTCTCTACCTCAAGGTTGTCCCACTCGCCCTCGACCTTCAGCTCCGG
GTCCAGGTCGCGCAGCACCGCGCGGATGTTCTTCGCCAACTGCCGGATGAAGCGCTTGCGCACCGGCCGGCT
CTTGATGGTGATTTCCTGGAAGGTCTTGACGATGAGTTTCATGCGAGGGACGCGAACGCGCGGGGCGACGGA
AAAAAAGGGGCGGAATTATATCTGAAATTGCTCACGTATTGA
Translation:
MLPPNKPGCLSRTINTHIGVPLVEQMMGMQAAHHPFVAIQEVLAVGVQFLEAAVDRVERQRLDFDAFQGQGF
VFLGIRMADIDDNLTGQHLADLFHLQVLAEFVDHPVDGALGGALQGALEHRHVEFRLFVLDAVGLGLGGRVH
RDHPAVFRHVPGELGGADLPGGVDDVLLVADDQRAQHQGVGNPVDHREVRQGLAGHLGDRLAGHQRVQLQAL
GHAAGGAQHHALEGHAHIAVVDLGEDLADHFLERHADEQHALRAAVLLPQVVGDFHHPQFVGAPAEVEEHEV
ADHPAAHHLVGRHGRVEAAGHQHQHLFQRAQRIAAQARMLAMDDEQAVEADFHPHLDFRLLQVDPGSPAFAA
QAAADVTLHLHRGERVLAGALAAHGEGLAGQLVAEMRLALGEDVVEIAQRILVDLEEMTDARGAGQALDHFA
PDLGVDHGGLYLKVVPLALDLQLRVQVAQHRADVLRQLPDEALAHRPALDGDFLEGLDDEFHARDANARGDG
KKGAELYLKLLTY*
AnnotationID:6858GeneID:6857
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 08:08:58
Gene Name:
Confidence Code:3
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13423
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30797
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49859How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5300604Stop: 5302157
Length: 1554
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTGCCGCCGAACAAGCCCGGCTGCTTAAGCCGGACGATAAACACGCACATTGGTGTGCCCCTCGTTGAG
CAGATGATGGGCATGCAGGCGGCTCATCACCCCTTTGTCGCAATACAGGAGGTACTGGCGGTTGGCGTCCAG
TTCCTTGAAGCGGCTGTTGATCGCGTAGAACGGCAGCGCCTGGACTTCGACGCCTTCCAGGGCCAGGGGTTC
GTCTTCCTGGGCATCAGGATGGCGGATATCGATGACAATCTGACCGGGCAGCACCTCGCCGACCTCTTCCAC
CTGCAGGTCCTGGCCGAGTTCGTCGATCACCCGGTCGACGGTGCGCTGGGTGGCGCGCTCCAGGGCGCGCTC
GAGCACCGCCATGTCGAATTTCGACTCTTCGTGCTCGACGCGGTAGGGCTTGGCCTGGGTGGTCGGGTTCAC
CGAGATCACCCCGCAGTATTCCGGCATGTGCCGGGCGAACTCGGCGGTGCCGATCTGCCGGGCGGTGTCGAT
GATGTCCTGCTTGTGGCTGACGATCAGCGGGCGCAGCACCAGGGTGTCGGTAACCCGGTCGATCACCGAGAG
GTTCGGCAGGGTCTGGCTGGACACCTGGGAGATCGCCTCGCCGGTCACCAGCGCGTCCAGCTCCAGGCGCTC
GGCCACGCGGCTGGCGGCGCGCAGCATCATGCGCTTGAGGGTCACGCCCATATAGCTGTCGTCGACCTTGGT
GAGGATCTCGCCGACCACTTCCTCGAACGGCACGCTGATGAACAGCACGCGCTGCGAGCGGCCGTACTTCTC
CCACAGGTAGTGGGCGACTTCCATCACCCCCAGTTCGTGGGCGCGCCCGCCGAGGTTGAAGAACACGAAGTG
GCTGATCATCCCGCGGCGCATCATCTGGTAGGCCGCCACGGTCGAGTCGAAGCCGCCGGACATCAGCACCAG
CACCTGTTCCAGCGCGCCCAGCGGATAGCCGCCCAGGCCCGGATGCTGGCGATGGATGACGAACAGGCGGTC
GAGGCGGATTTCCATCCGCACCTCGACTTCCGGCTGCTTCAGGTCGATCCCGGCAGCCCCGCATTCGCGGCG
CAGGCCGCTGCCGACGTAACGCTCCACCTCCATCGAGGTGAACGCGTGCTTGCCGGCGCGCTTGCAGCGCAC
GGCGAAGGTCTTGCCGGCCAACTGGTCGCCGAAATGCGCCTTGCACTTGGCGAGGATGTCGTCGAAATCGCC
CAGCGGATACTCGTGGACCTCGAGGAAATGACCGATGCCCGGGGTGCAGGTCAGGCGCTCGATCATTTCGCG
CCTGACCTTGGCGTCGACCACGGCGGTCTCTACCTCAAGGTTGTCCCACTCGCCCTCGACCTTCAGCTCCGG
GTCCAGGTCGCGCAGCACCGCGCGGATGTTCTTCGCCAACTGCCGGATGAAGCGCTTGCGCACCGGCCGGCT
CTTGATGGTGATTTCCTGGAAGGTCTTGACGATGAGTTTCATGCGAGGGACGCGAACGCGCGGGGCGACGGA
AAAAAAGGGGCGGAATTATATCTGAAATTGCTCACGTATTGA