ViewGene
Locus Name:
GeneID:
Location:

GeneID:6856
TrivialName: PA14_67480
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 19:07:19
LocusName:PA14_67480
PAO1 Ortholog Locus:
Sequence Length:522
Protein Length:173
Start: 6024218
Stop: 6024739
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGATGCCGCTCGGCATAGTCGTAGAAGTCATCGAAGGGCTGGCGCGCACTGCCGCCGACCTGATCGCGCAG
GTCGCGGAAGCAGGCTACCGCCCGCTCCTGGCTGGGCAGGTCCTCGGCGTGCTCCAGGACCAGGTAGGCGAA
CACCCGGCGCACCGGCGGCAACTGGCGGTCGAAGCCTTTCTCCAGGCCCTCGCGCACCACCCGTTGCGCTCG
GGCGTCGCCGGCGTAGGCGCGCGGCGTGTCGCGGTAGATCATCCGCGGCAACTGGTCGAGCAACAGGATCAA
CGCCAGCCAGCCATCGGCCTCGGCCGTCCACTCCTGCAAGCCGCCGTCCAGCGCCTGGTTCACCAGGTCGCC
GAAACGGCCGCCGGCATCGGCGTCCTGGCAGACGTTCTTGCCGAACCACAGGCCGTTGCGCTGGGCAACCAC
CTCGGCGGCATCGCTGGAGGTGCCGAACCACCAGTCGAGCAGGGTCTCCCAGGGCGCGCTCATCGGCCTACT
CCGCGTGGTAGCCGGTGA
Translation:
MMPLGIVVEVIEGLARTAADLIAQVAEAGYRPLLAGQVLGVLQDQVGEHPAHRRQLAVEAFLQALAHHPLRS
GVAGVGARRVAVDHPRQLVEQQDQRQPAIGLGRPLLQAAVQRLVHQVAETAAGIGVLADVLAEPQAVALGNH
LGGIAGGAEPPVEQGLPGRAHRPTPRGSR*
AnnotationID:6857GeneID:6856
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 19:07:34
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13422




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30795




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49858How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5287903Stop: 5288424

          
Length: 522


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGATGCCGCTCGGCATAGTCGTAGAAGTCATCGAAGGGCTGGCGCGCACTGCCGCCGACCTGATCGCGCAG 
GTCGCGGAAGCAGGCTACCGCCCGCTCCTGGCTGGGCAGGTCCTCGGCGTGCTCCAGGACCAGGTAGGCGAA 
CACCCGGCGCACCGGCGGCAACTGGCGGTCGAAGCCTTTCTCCAGGCCCTCGCGCACCACCCGTTGCGCTCG 
GGCGTCGCCGGCGTAGGCGCGCGGCGTGTCGCGGTAGATCATCCGCGGCAACTGGTCGAGCAACAGGATCAA 
CGCCAGCCAGCCATCGGCCTCGGCCGTCCACTCCTGCAAGCCGCCGTCCAGCGCCTGGTTCACCAGGTCGCC 
GAAACGGCCGCCGGCATCGGCGTCCTGGCAGACGTTCTTGCCGAACCACAGGCCGTTGCGCTGGGCAACCAC 
CTCGGCGGCATCGCTGGAGGTGCCGAACCACCAGTCGAGCAGGGTCTCCCAGGGCGCGCTCATCGGCCTACT 
CCGCGTGGTAGCCGGTGA