ViewGene

Locus Name:
GeneID:
Location:

GeneID:6855
TrivialName: PA14_67430
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67430
PAO1 Ortholog Locus:
Sequence Length:1761
Protein Length:586
Start: 6023011
Stop: 6021251
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 123/454 (27%), Positives = 158/454 (34%), Gaps = 69/454 (15%)
Sequence:
ATGCCGGCCGTCGCGCACCACCCATCTGCCGGCCACCATCACGTCGCGCACCTGGCGGTCGCCGCCGGCGAA
CAGCCAGCGGTTGAGCAGGGCGTCGCCCTCGGCGCTGGCCAGGTAGGGGTCGTTGCCGTCGAGCACCAGCAG
GTCGGCGCGGCGGCCCACGGCGAGGCTACCGATCGGCTGCCCAAGGGCCTGAGCGCCGCCAGCCAGCGCAGC
GTCGTAGAGCGTGCGGCCGATCATCGGCTGGTCGTCGCGGTACAGCCGGTTGCGTTTCCGGTCGCGCAGGCG
CTGGCCGTATTCCAGCCAGCGGAGTTCCTCGACCACGCTGAGCGAGACGTGGCTGTCCGAGCCGATGCCCAG
GCGCCCGCCCTGGGCGAGGAAGTCCGTCGCCGGGAAGATGCCGTCGCCGAGGTTGGCCTCGGTGCTCAGGCA
CAGGCCGGCCACCGCGCCGCTACGCGCCATCGCCGCCACCTCGGCGGGGTCGGCGTGGGTCGCATGGACCAG
GCACCAGCGCTGGTCGACCGCGACGTTCTCGTACAGCCATTGCAACGGCCGGCGTCCGCTCCAGGCCAGGCA
GTCGTCGACTTCCTTCTGCTGTTCGGCGATATGGATGTGGACCGGCAGGTCGTCGTGGCCGGCGGCGAGGAC
CGTGGCGATCTGCTGCGGAGTCACCGCGCGCAGGGAGTGGAAGCACAGGCCCAGGGAGTGGCCTGCCGCGTC
CAGCGGCGCGCGCAGGCGCTGGAGCAGTTCCAGATAGGCCTCGCTGCCATTGATGAAGCGCCGCTGGCCCTC
GCTGGCCGGCTGGCCGCCGAAGCCTGCGTGGCTGTAAAGCACGGGAAGCAGGGTCAGGCCGATGCCGGCGGC
GCTGGCGGCGCGGGAGATGCGCAGGGAAAGTTCGGCGGGGTCGGCGTAGGAGCGGCCGTCGAGGTCGTGATG
GACGTAGTGGAATTCCGCCACCGCCGTGTAGCCGGCCTTGAGCATCTCGATATAGAGCTGGCGGGCGATGAC
CTCGATCTGTTCCGGCGACAGCCGAGCGACCATCCGGTACATCAGCTCGCGCCAGGTCCAGAAACTGTCGTT
GGGATTGCCGGCGACTTCGGCGAGCCCGGCCATGGCGCGCTGGAACGCGTGCGAATGGAGGTTGGGCATCCC
CGGCAGCACGGCGCCGCCGAGGCGTTCGGCGCCGTCGGCGTTGGCGTCGGGACGAATCTCGGCGAGAACTCC
GTCCGCGGAAATCTCGAAACGGACATTTCGCGCCCAGCCTTCCGGCAGCAACGCACGTTCAGCGAAAATTGC
GGACATAATCAGCTCACACGCAGTCTGTTTTATTTGTATATACATATACAGACGATTAAGCGGTGCGTAAAC
TCACTTCATCGACGCCTCGACAAGGAGTCTCTCCGTGACGTCCTCTTCTTCCGATCGTTCCCCGCTGGCCTC
GCAACTCGGCGAGGTACCGGCGCCGCTCTACGCGCGGGTCAAGCAGATGATCGTCAGCCAGATCCAGTCGGG
CGCCTGGCCGCCGCACCACCGGGTGCCCTCCGAGAGCGAACTGGTCAGCCAGCTCGGCTTCAGTCGCATGAC
CATCAATCGCGCCCTGCGCGAACTGACCAGCGACGGCCTGCTGGTGCGCATGCAGGGGGTCGGTACCTTCGT
CGCCGAGCCCAAGGGCCAGTCGGCACTGTTCGAGGTGCACAATATCGCCGACGAGATCGCGGCCCGCGGGCA
TCGCCATCGTTGCCAGGTGATCACCCTCGGTGA
Translation:
MPAVAHHPSAGHHHVAHLAVAAGEQPAVEQGVALGAGQVGVVAVEHQQVGAAAHGEATDRLPKGLSAASQRS
VVERAADHRLVVAVQPVAFPVAQALAVFQPAEFLDHAERDVAVRADAQAPALGEEVRRREDAVAEVGLGAQA
QAGHRAATRHRRHLGGVGVGRMDQAPALVDRDVLVQPLQRPASAPGQAVVDFLLLFGDMDVDRQVVVAGGED
RGDLLRSHRAQGVEAQAQGVACRVQRRAQALEQFQIGLAAIDEAPLALAGRLAAEACVAVKHGKQGQADAGG
AGGAGDAQGKFGGVGVGAAVEVVMDVVEFRHRRVAGLEHLDIELAGDDLDLFRRQPSDHPVHQLAPGPETVV
GIAGDFGEPGHGALERVRMEVGHPRQHGAAEAFGAVGVGVGTNLGENSVRGNLETDISRPAFRQQRTFSENC
GHNQLTRSLFYLYIHIQTIKRCVNSLHRRLDKESLRDVLFFRSFPAGLATRRGTGAALRAGQADDRQPDPVG
RLAAAPPGALRERTGQPARLQSHDHQSRPARTDQRRPAGAHAGGRYLRRRAQGPVGTVRGAQYRRRDRGPRA
SPSLPGDHPR*
AnnotationID:6856GeneID:6855
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 07:07:42
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13421
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30793
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49857How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5286696Stop: 5284936
Length: 1761
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCGGCCGTCGCGCACCACCCATCTGCCGGCCACCATCACGTCGCGCACCTGGCGGTCGCCGCCGGCGAA
CAGCCAGCGGTTGAGCAGGGCGTCGCCCTCGGCGCTGGCCAGGTAGGGGTCGTTGCCGTCGAGCACCAGCAG
GTCGGCGCGGCGGCCCACGGCGAGGCTACCGATCGGCTGCCCAAGGGCCTGAGCGCCGCCAGCCAGCGCAGC
GTCGTAGAGCGTGCGGCCGATCATCGGCTGGTCGTCGCGGTACAGCCGGTTGCGTTTCCGGTCGCGCAGGCG
CTGGCCGTATTCCAGCCAGCGGAGTTCCTCGACCACGCTGAGCGAGACGTGGCTGTCCGAGCCGATGCCCAG
GCGCCCGCCCTGGGCGAGGAAGTCCGTCGCCGGGAAGATGCCGTCGCCGAGGTTGGCCTCGGTGCTCAGGCA
CAGGCCGGCCACCGCGCCGCTACGCGCCATCGCCGCCACCTCGGCGGGGTCGGCGTGGGTCGCATGGACCAG
GCACCAGCGCTGGTCGACCGCGACGTTCTCGTACAGCCATTGCAACGGCCGGCGTCCGCTCCAGGCCAGGCA
GTCGTCGACTTCCTTCTGCTGTTCGGCGATATGGATGTGGACCGGCAGGTCGTCGTGGCCGGCGGCGAGGAC
CGTGGCGATCTGCTGCGGAGTCACCGCGCGCAGGGAGTGGAAGCACAGGCCCAGGGAGTGGCCTGCCGCGTC
CAGCGGCGCGCGCAGGCGCTGGAGCAGTTCCAGATAGGCCTCGCTGCCATTGATGAAGCGCCGCTGGCCCTC
GCTGGCCGGCTGGCCGCCGAAGCCTGCGTGGCTGTAAAGCACGGGAAGCAGGGTCAGGCCGATGCCGGCGGC
GCTGGCGGCGCGGGAGATGCGCAGGGAAAGTTCGGCGGGGTCGGCGTAGGAGCGGCCGTCGAGGTCGTGATG
GACGTAGTGGAATTCCGCCACCGCCGTGTAGCCGGCCTTGAGCATCTCGATATAGAGCTGGCGGGCGATGAC
CTCGATCTGTTCCGGCGACAGCCGAGCGACCATCCGGTACATCAGCTCGCGCCAGGTCCAGAAACTGTCGTT
GGGATTGCCGGCGACTTCGGCGAGCCCGGCCATGGCGCGCTGGAACGCGTGCGAATGGAGGTTGGGCATCCC
CGGCAGCACGGCGCCGCCGAGGCGTTCGGCGCCGTCGGCGTTGGCGTCGGGACGAATCTCGGCGAGAACTCC
GTCCGCGGAAATCTCGAAACGGACATTTCGCGCCCAGCCTTCCGGCAGCAACGCACGTTCAGCGAAAATTGC
GGACATAATCAGCTCACACGCAGTCTGTTTTATTTGTATATACATATACAGACGATTAAGCGGTGCGTAAAC
TCACTTCATCGACGCCTCGACAAGGAGTCTCTCCGTGACGTCCTCTTCTTCCGATCGTTCCCCGCTGGCCTC
GCAACTCGGCGAGGTACCGGCGCCGCTCTACGCGCGGGTCAAGCAGATGATCGTCAGCCAGATCCAGTCGGG
CGCCTGGCCGCCGCACCACCGGGTGCCCTCCGAGAGCGAACTGGTCAGCCAGCTCGGCTTCAGTCGCATGAC
CATCAATCGCGCCCTGCGCGAACTGACCAGCGACGGCCTGCTGGTGCGCATGCAGGGGGTCGGTACCTTCGT
CGCCGAGCCCAAGGGCCAGTCGGCACTGTTCGAGGTGCACAATATCGCCGACGAGATCGCGGCCCGCGGGCA
TCGCCATCGTTGCCAGGTGATCACCCTCGGTGA