ViewGene

Locus Name:
GeneID:
Location:

GeneID:6854
TrivialName: PA14_67390
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67390
PAO1 Ortholog Locus:
Sequence Length:1641
Protein Length:546
Start: 6018539
Stop: 6020179
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCAGGCCCCACAGGCGCCAGGCGGCGCCCTCTCCCTGGCGCAACCGCGAACCCTCCAGGCGCGCCATCGC
CGCCAGGGCCAGCAGCGGGCCGAGGGTGGCGCGACCGAGCAGGGTCTTGTCCAGGCAGAGCCAGCGCCGCCG
CCAGGAGCCCAGGCGCGGCCATTCGGACAGACTGACGTAGCGACTCTCGGGGTCCAGCCCCGGGTAGGTCAG
TTGCTCGTCGCGGTGGTGCCGCAAGTGGCTGTCACGGTACAGCGGATAGGGATACCAGACGGCCAGCGGCAG
GTAGCCGAGCACGGCGTTGAACCTCGGCCAGCGGGTCGGGTGGCCATGGATCAGCTCATGCTGCAACGACAT
GTAGAGGGAGGCGAACGGCACCAGCCCCGCCAGCACCGGCCAGCCCCAATGCCGATACTGGCTGGCGAGCAG
TGCCCAACCGCCGTACAGGCAGGCGATCAGCAGCCAGGTCGGCCATTCGCTGCGCGCCTGGAAGGTATCCTG
GAGCCGCCGCACCAGGGTGCGCTGACGCCCGCTCAGGTAGTGCGCCATGAAGGCTGGCGAGGCTTACTTCAG
GGAGGTATCGAGGCGCGCGGCGACTTCGGCTGGCACCCAGTGGCTCCAGATTTCGCGATGCTGGCGAAGGAA
CTGCGCACGCACCTCGCCGACCTCGCGATGATTCTGCGCCATGTCGGCGAGCAGCTCGTTGAACAGCGGCAA
GGGGATCTCGACCTTGCGGAACAGCTCGACCAACGCCGGCGCCTTGTCATGGAAATCGCGGGAAACGCCAAT
GGTGATCTTCGCCGGCAACGAGCGGGAACCGATGGGGTCGGGGTTCTTCGGATCGGACAGGGTGGCCCAGGC
CTTCTCGCTGAACGGCGGCTCTTCCAGTTGCACCAGCTTGAAACGGCCCATCAACGGAGTCGGCGACCAATA
GTAGAAAAGCACCGGCTCACCGCGCCGGAAGGCCGCACTGATCGCCGCATCCAGCGCCGGGCCGGTGCCGGT
GCGGAAGTTCGTGTAGCTGTCCTGCAACCTGTAGGCCTTGAGCTTCTGGCTGTTGACGATCTCGCAGGTCCA
ACCGGTCGGGCAGTTGTAGAAACGCCCCTTGGCGGGCTCCTCGGGATCGCGGAACAGCGCCTTGTAGCGCGG
CAGGTCGGCGACCGACCTCAACTCCGGCGCCTTCGCCTCGATGCCTCGTTGCGGGTCGCCCTTGACCAGGTA
CTCCGGCACCCACCAGCCCTCGGTGGCGCCCTTCACCGTCTCGCCGACGGAGAACACCTCGCCCGCCTCCTC
CGCCGCGCGCCACACCGGGCTACGCCCGGCCCATTGCTCCCCGGTGACCTGGATATCGTTCTGGCGCAGGGC
GTTTTCCATGGTCACGGTATTGCCCGGCAGCGCGTCGGTCTCGCAGCCGTAGCCTTTTTCCAGTACGTAGCG
CAACAGGTCGGTGGTGAACATGCCGCTTTCCCAGTTCAGCCCGGCGAACACCACTTTGCCCGGGTACGGGCA
TTCCGCCGCGACGGCGGTCTGGCTGGCGAGGCTGGCGCCCAGGGCGAGGACGGCGAGGATCTGGCGAAGCGG
GGGCATGCGGGTCTCCCGGTTGGAGTCGGACGGCATGCGGAACTATATAGGCATTAA
Translation:
MQAPQAPGGALSLAQPRTLQARHRRQGQQRAEGGATEQGLVQAEPAPPPGAQARPFGQTDVATLGVQPRVGQ
LLVAVVPQVAVTVQRIGIPDGQRQVAEHGVEPRPAGRVAMDQLMLQRHVEGGERHQPRQHRPAPMPILAGEQ
CPTAVQAGDQQPGRPFAARLEGILEPPHQGALTPAQVVRHEGWRGLLQGGIEARGDFGWHPVAPDFAMLAKE
LRTHLADLAMILRHVGEQLVEQRQGDLDLAEQLDQRRRLVMEIAGNANGDLRRQRAGTDGVGVLRIGQGGPG
LLAERRLFQLHQLETAHQRSRRPIVEKHRLTAPEGRTDRRIQRRAGAGAEVRVAVLQPVGLELLAVDDLAGP
TGRAVVETPLGGLLGIAEQRLVARQVGDRPQLRRLRLDASLRVALDQVLRHPPALGGALHRLADGEHLARLL
RRAPHRATPGPLLPGDLDIVLAQGVFHGHGIARQRVGLAAVAFFQYVAQQVGGEHAAFPVQPGEHHFARVRA
FRRDGGLAGEAGAQGEDGEDLAKRGHAGLPVGVGRHAELYRH*
AnnotationID:6855GeneID:6854
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 07:07:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13419
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30791
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49856How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5282224Stop: 5283864
Length: 1641
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCAGGCCCCACAGGCGCCAGGCGGCGCCCTCTCCCTGGCGCAACCGCGAACCCTCCAGGCGCGCCATCGC
CGCCAGGGCCAGCAGCGGGCCGAGGGTGGCGCGACCGAGCAGGGTCTTGTCCAGGCAGAGCCAGCGCCGCCG
CCAGGAGCCCAGGCGCGGCCATTCGGACAGACTGACGTAGCGACTCTCGGGGTCCAGCCCCGGGTAGGTCAG
TTGCTCGTCGCGGTGGTGCCGCAAGTGGCTGTCACGGTACAGCGGATAGGGATACCAGACGGCCAGCGGCAG
GTAGCCGAGCACGGCGTTGAACCTCGGCCAGCGGGTCGGGTGGCCATGGATCAGCTCATGCTGCAACGACAT
GTAGAGGGAGGCGAACGGCACCAGCCCCGCCAGCACCGGCCAGCCCCAATGCCGATACTGGCTGGCGAGCAG
TGCCCAACCGCCGTACAGGCAGGCGATCAGCAGCCAGGTCGGCCATTCGCTGCGCGCCTGGAAGGTATCCTG
GAGCCGCCGCACCAGGGTGCGCTGACGCCCGCTCAGGTAGTGCGCCATGAAGGCTGGCGAGGCTTACTTCAG
GGAGGTATCGAGGCGCGCGGCGACTTCGGCTGGCACCCAGTGGCTCCAGATTTCGCGATGCTGGCGAAGGAA
CTGCGCACGCACCTCGCCGACCTCGCGATGATTCTGCGCCATGTCGGCGAGCAGCTCGTTGAACAGCGGCAA
GGGGATCTCGACCTTGCGGAACAGCTCGACCAACGCCGGCGCCTTGTCATGGAAATCGCGGGAAACGCCAAT
GGTGATCTTCGCCGGCAACGAGCGGGAACCGATGGGGTCGGGGTTCTTCGGATCGGACAGGGTGGCCCAGGC
CTTCTCGCTGAACGGCGGCTCTTCCAGTTGCACCAGCTTGAAACGGCCCATCAACGGAGTCGGCGACCAATA
GTAGAAAAGCACCGGCTCACCGCGCCGGAAGGCCGCACTGATCGCCGCATCCAGCGCCGGGCCGGTGCCGGT
GCGGAAGTTCGTGTAGCTGTCCTGCAACCTGTAGGCCTTGAGCTTCTGGCTGTTGACGATCTCGCAGGTCCA
ACCGGTCGGGCAGTTGTAGAAACGCCCCTTGGCGGGCTCCTCGGGATCGCGGAACAGCGCCTTGTAGCGCGG
CAGGTCGGCGACCGACCTCAACTCCGGCGCCTTCGCCTCGATGCCTCGTTGCGGGTCGCCCTTGACCAGGTA
CTCCGGCACCCACCAGCCCTCGGTGGCGCCCTTCACCGTCTCGCCGACGGAGAACACCTCGCCCGCCTCCTC
CGCCGCGCGCCACACCGGGCTACGCCCGGCCCATTGCTCCCCGGTGACCTGGATATCGTTCTGGCGCAGGGC
GTTTTCCATGGTCACGGTATTGCCCGGCAGCGCGTCGGTCTCGCAGCCGTAGCCTTTTTCCAGTACGTAGCG
CAACAGGTCGGTGGTGAACATGCCGCTTTCCCAGTTCAGCCCGGCGAACACCACTTTGCCCGGGTACGGGCA
TTCCGCCGCGACGGCGGTCTGGCTGGCGAGGCTGGCGCCCAGGGCGAGGACGGCGAGGATCTGGCGAAGCGG
GGGCATGCGGGTCTCCCGGTTGGAGTCGGACGGCATGCGGAACTATATAGGCATTAA