ViewGene

Locus Name:
GeneID:
Location:

GeneID:6853
TrivialName: PA14_67360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67360
PAO1 Ortholog Locus:
Sequence Length:1590
Protein Length:529
Start: 6015545
Stop: 6017134
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCAGCGAGACCCAGGTGGCGCCGCTGGCGGTATTCAGCAGGGCATTCAGCAGCGGCCAGTCGGACACCGC
GTCGGAGCCGTCCTGCATGGCCTCGGTCTCGCGGTTGGGGCTGGCCACCGAGCCGGAGTCGAGGTGGTCGCG
GCCGATGACGATCGGTGCGGACAGCTCGCCGCTGCGCACCATCTCGTTGAAGGCCAGGCCGAGCTTGGCGCG
CAGCCCCAGGCCAACCCAGCAGATGCGCGCCGGCAGGCCCTGGAAGCTGATGCGCTCGCGGGCCATGTCCAG
CCAACGGTGCAGGTGGGCATCGTCGGGGATCAGTTGCTTGACCTTGGCGTCGGTCTTGTAGATGTCCTGCGG
GTCGCCCGACAGCGCGGCCCAGCGGAACGGACCGATGCCGCGACAGAACAGCGGGCGGATGTAGGCCGGGAC
GAAGCCGGGGAAATCGAAGGCATTGGCCACCCCCTCTTCCTTGGCCATCTGGCGGATGTTGTTGCCATAGTC
GAAGGTCGGCACGCCCTGCTGCTGGAACGCCAGCATGGCCCGCACGTGTACCGCCATGGACTGCTTGGCGGC
CTTGACCACGGCGGCCGGGTCGGTCTGCGCGCGGTCGCGGTACTCTTCCCAGCTCCAGCCGGCCGGCAGGTA
GCCGTTGAGCGGATCGTGGGCGCTGGTCTGGTCGGTGACCATGTCCGGGCGTACGCCGCGGCGAACCAGTTC
CGGAAGGATCTCGGCGGCATTGCCCAGCAGGGCGATGGAGATGGCCTTGCCTTCGGCGGTGTAGCGCTGGAT
CCGCGCCAGGGCGTCGTCCAGGTCCTTGGCCTGCTCGTCGACGTAGCGACTGCGCAGGCGGAAGTCGATGCG
GCTCTGCTGGCACTCGATGTTCAGCGAACAGGCGCCGGCCAGGGTCGCCGCCAGCGGCTGGGCGCCGCCCAT
GCCGCCAAGGCCGGCGGTAAGCACCCAGCGGCCCTTGAGGTTGCCGTCGTAATGCTGGCGGCCAGCCTCGAC
GAAGGTTTCGTAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCACGAACCGGCGGTCATCTGGCC
GTACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGGTCGCCCAGTGCGGCACCAGGTTGGA
GTTGGCGATCAGCACCCGCGGCGCGTTGGCGTGGGTCTTGAACACGCCAACCGGCTTGCCGGACTGTACCAG
CAGGGTCTCGTCGTCGTTCAGTTGCTTGAGGGTCTCGACGATCCTGTCGTAGCACTCCCAGTTGCGCGCGGC
ACGGCCGATGCCGCCGTAAACCACCAGTTCCCTGGGGTTCTCCGCGACCTCCGGGTCGAGGTTGTTCATCAG
CATGCGCAGCGGCGCTTCGGTCAGCCAGCTCTTGGCGGTCAGCGTAGTGCCGCGCGGGGCGCGGATTTCAAT
ATCGCGGAATTTGCTCGGGGTGGTCACGGCAGGCTCCTGGGCGTGGCGTTCAACGGGCGGCGCCCCGCGAGG
GTGCGCCTGAATTCGGGGACGAAGCAGAGGTCGGGCTGGGTCTACCGAACACATCTATGCTTGTACATACAA
GTATAA
Translation:
MQRDPGGAAGGIQQGIQQRPVGHRVGAVLHGLGLAVGAGHRAGVEVVAADDDRCGQLAAAHHLVEGQAELGA
QPQANPADARRQALEADALAGHVQPTVQVGIVGDQLLDLGVGLVDVLRVARQRGPAERTDAATEQRADVGRD
EAGEIEGIGHPLFLGHLADVVAIVEGRHALLLERQHGPHVYRHGLLGGLDHGGRVGLRAVAVLFPAPAGRQV
AVERIVGAGLVGDHVRAYAAANQFRKDLGGIAQQGDGDGLAFGGVALDPRQGVVQVLGLLVDVATAQAEVDA
ALLALDVQRTGAGQGRRQRLGAAHAAKAGGKHPAALEVAVVMLAASLDEGFVGALDDALAADVDPRTGGHLA
VHRQALGVQFVEVFPGRPVRHQVGVGDQHPRRVGVGLEHANRLAGLYQQGLVVVQLLEGLDDPVVALPVARG
TADAAVNHQFPGVLRDLRVEVVHQHAQRRFGQPALGGQRSAARGADFNIAEFARGGHGRLLGVAFNGRRPAR
VRLNSGTKQRSGWVYRTHLCLYIQV*
AnnotationID:6854GeneID:6853
AnnotatorUID: diggins
Modification Date/Time: 2004-10-22 18:06:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
no data found via CDD Search
Genomic Context:
Comment:
ReferenceID:16605
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30789
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49855How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5279230Stop: 5280819
Length: 1590
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCAGCGAGACCCAGGTGGCGCCGCTGGCGGTATTCAGCAGGGCATTCAGCAGCGGCCAGTCGGACACCGC
GTCGGAGCCGTCCTGCATGGCCTCGGTCTCGCGGTTGGGGCTGGCCACCGAGCCGGAGTCGAGGTGGTCGCG
GCCGATGACGATCGGTGCGGACAGCTCGCCGCTGCGCACCATCTCGTTGAAGGCCAGGCCGAGCTTGGCGCG
CAGCCCCAGGCCAACCCAGCAGATGCGCGCCGGCAGGCCCTGGAAGCTGATGCGCTCGCGGGCCATGTCCAG
CCAACGGTGCAGGTGGGCATCGTCGGGGATCAGTTGCTTGACCTTGGCGTCGGTCTTGTAGATGTCCTGCGG
GTCGCCCGACAGCGCGGCCCAGCGGAACGGACCGATGCCGCGACAGAACAGCGGGCGGATGTAGGCCGGGAC
GAAGCCGGGGAAATCGAAGGCATTGGCCACCCCCTCTTCCTTGGCCATCTGGCGGATGTTGTTGCCATAGTC
GAAGGTCGGCACGCCCTGCTGCTGGAACGCCAGCATGGCCCGCACGTGTACCGCCATGGACTGCTTGGCGGC
CTTGACCACGGCGGCCGGGTCGGTCTGCGCGCGGTCGCGGTACTCTTCCCAGCTCCAGCCGGCCGGCAGGTA
GCCGTTGAGCGGATCGTGGGCGCTGGTCTGGTCGGTGACCATGTCCGGGCGTACGCCGCGGCGAACCAGTTC
CGGAAGGATCTCGGCGGCATTGCCCAGCAGGGCGATGGAGATGGCCTTGCCTTCGGCGGTGTAGCGCTGGAT
CCGCGCCAGGGCGTCGTCCAGGTCCTTGGCCTGCTCGTCGACGTAGCGACTGCGCAGGCGGAAGTCGATGCG
GCTCTGCTGGCACTCGATGTTCAGCGAACAGGCGCCGGCCAGGGTCGCCGCCAGCGGCTGGGCGCCGCCCAT
GCCGCCAAGGCCGGCGGTAAGCACCCAGCGGCCCTTGAGGTTGCCGTCGTAATGCTGGCGGCCAGCCTCGAC
GAAGGTTTCGTAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCACGAACCGGCGGTCATCTGGCC
GTACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGGTCGCCCAGTGCGGCACCAGGTTGGA
GTTGGCGATCAGCACCCGCGGCGCGTTGGCGTGGGTCTTGAACACGCCAACCGGCTTGCCGGACTGTACCAG
CAGGGTCTCGTCGTCGTTCAGTTGCTTGAGGGTCTCGACGATCCTGTCGTAGCACTCCCAGTTGCGCGCGGC
ACGGCCGATGCCGCCGTAAACCACCAGTTCCCTGGGGTTCTCCGCGACCTCCGGGTCGAGGTTGTTCATCAG
CATGCGCAGCGGCGCTTCGGTCAGCCAGCTCTTGGCGGTCAGCGTAGTGCCGCGCGGGGCGCGGATTTCAAT
ATCGCGGAATTTGCTCGGGGTGGTCACGGCAGGCTCCTGGGCGTGGCGTTCAACGGGCGGCGCCCCGCGAGG
GTGCGCCTGAATTCGGGGACGAAGCAGAGGTCGGGCTGGGTCTACCGAACACATCTATGCTTGTACATACAA
GTATAA