ViewGene

Locus Name:
GeneID:
Location:

GeneID:6852
TrivialName: PA14_67330
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67330
PAO1 Ortholog Locus:
Sequence Length:2121
Protein Length:706
Start: 6012438
Stop: 6014558
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15]
Identities = 76/277 (27%), Positives = 98/277 (35%), Gaps = 46/277 (16%)
Sequence:
GTGGTCTTCCTGGTTGGCCGAGGTCGGCAGGCTGTCGACGCTGGCCGGATGGGCCAGGGCCTTGTTGTCGCT
GGCCAGCGCGGCGGCGGTGACCTGGGCGATCATGAAGCCGGAGTTGACCCCGCCGTTGGCCACCAGGAACGG
CGGCAACTGCGACATGTGCATGTCCATCATCAGCGAGATGCGCCGTTCCGACAGCGAACCGATCTCGGCCAA
CGCCAGGGCCAGGTTGTCGGCGGCCATCGCCACCGGTTCGGCGTGGAAGTTGCCGCCGGAGATCACGTCGCC
CTCGGCGGCGAATACCAGCGGGTTGTCGGACACCGCGTTGGCTTCGATCTCCAGCACCTCGGCGGCCTGGCG
CATCTGGGTCAGGCAGGCGCCCATCACCTGCGGCTGGCAACGCAGCGAATAGGGGTCCTGGACCTTGTCGCA
CTTCTCATGGGAACGCGCCACCTCGCTGCTGGCGGTGAGCAGGTCGCGATAGGCCGCGGCCACGTCGATCTG
CCCACGCTGGCCGCGCGCGGCGTGGATGCGCGCATCGAACGGCGCCCGCGAACCGAGCATGGCCTCGACGCT
GAGCCCGCCGCAGACGGTGGCGGCGGCGAACAGGTCCTCGGCCTCGAACAACCCGCGCAGCGCGTAGGCGGT
GGACACCTGGGTACCATTGAGCAGGGCCAGGCCTTCCTTCGCCGCCAGGGTCAGCGGCTCCAGCCCGGCCAC
CGCCAGCGCCTCGGCGGCCGGCAGCCACTCACCGCGATGGCGCGCCCGGCTTTCGCCGATCAGCACCAGCGA
CATGTGCGCCAGCGGCGCCAGGTCGCCGGAGGCGCCCACCGAGCCTTTCAGCGGGATGTGCGGATAGACCTC
GGCGTTGATCAGCGCGATCAGCGCGTCGATCACCTTGCGGCGGATGCCGGAGAACCCGCGAGCCAGGCTGTT
CACCTTGAGCAGCATGACCAGCCGCACCATGGCGTCGTCCAGCGCCTCGCCGACGCCGGCGGCATGGGACAG
GACGATGGAGCGCTGGAGCTTCTCCAGGTCGGCCGGGGAGATCCGCGTCGAGGCCAGCAGGCCGAAACCGGT
ATTGATGCCGTAGGCGGTGCGGCCCTCGGCGATGATGTTCTCGACACAGGCGACGCTGGCGGCGACCGGCGC
GTCGGCGCTGGGATCCAGGCTCAGGCGCACGGGGGCCAGGTAGGCTTGGCGCAGGTCGGCCAGGGTCAGCTG
GCCGGGTTTCAGATGCAGGCTCATCGAAGGCTCCTTGTTCGGTTCGGCGGGCTCGGCAGCGCCGTCCGCCGG
CGGCGTTTCATGGGATTGAAGGCGGCCGCGCCGCCCTGGAAATTCGTCTCAGGCCCCGTGCGCGGGACGTTC
GAAGGCGCCGGGATCGGCCGGCAGGATCATTCGCGCCGGGGCCTGGCGCGTGGCCTTGCGCCGCGCCACCAG
GTAGTAGAGGACCGCCGGCACCAGCAAGCCGATGATCCAGGAGATATCCACGCCGCCGAGGTGCTCGACCAT
CGGTCCGGTGTACAGCGTGGTCGCCAGGAACGGCATCTGCACCAGCACGCCGAGGGTATAGACGGCGATTCC
CGGCAGGTTCCAGCGACCGTAGCGGCCGTCGGGGTCGGCCAGCGCGGGCACGTCATAGCGCTCGCGGGTGAT
GAAGTAGTAGTCGACCAGGTTCACCGCGCTCCACGGGGTGAAGAAGGTCAGCAGGAACAGGATGAAGGACTT
GAACGCAGCGAGGAACGAGTGCTGGCCGAGCAGCGCGATGAGCGTCGAGGCGCCGACGATCGCGAGGACGAA
GAACAGGCGTTGCACGCGGGTGATCTCCAGTTGACCGCGTACGCTGCTGATGATGGTCGCGATGCACATGAA
GCTTCCGTAGGAGTTCAGCGTGGAAATGGTCACCTTGCCGAAGGCGATGCTGAAGTAGAGCAGCGCGGCGAC
GGTCCCGCTGCTGCCCAGGCCGACGATGTAGGCCACCTCGCGGCCGGCGAACTGGCCGTTGGCCAGGGCTGC
GGAGAACACCCCGAGGACCATCGAGGCCTGGGCGCCGAGCACCGAGCCGAGGCCGACGGCGAGGAAGGTCTT
CCACGACGAGGTGGACGCCGGCAGGTAGCGTGA
Translation:
MVFLVGRGRQAVDAGRMGQGLVVAGQRGGGDLGDHEAGVDPAVGHQERRQLRHVHVHHQRDAPFRQRTDLGQ
RQGQVVGGHRHRFGVEVAAGDHVALGGEYQRVVGHRVGFDLQHLGGLAHLGQAGAHHLRLATQRIGVLDLVA
LLMGTRHLAAGGEQVAIGRGHVDLPTLAARGVDARIERRPRTEHGLDAEPAADGGGGEQVLGLEQPAQRVGG
GHLGTIEQGQAFLRRQGQRLQPGHRQRLGGRQPLTAMARPAFADQHQRHVRQRRQVAGGAHRAFQRDVRIDL
GVDQRDQRVDHLAADAGEPASQAVHLEQHDQPHHGVVQRLADAGGMGQDDGALELLQVGRGDPRRGQQAETG
IDAVGGAALGDDVLDTGDAGGDRRVGAGIQAQAHGGQVGLAQVGQGQLAGFQMQAHRRLLVRFGGLGSAVRR
RRFMGLKAAAPPWKFVSGPVRGTFEGAGIGRQDHSRRGLARGLAPRHQVVEDRRHQQADDPGDIHAAEVLDH
RSGVQRGRQERHLHQHAEGIDGDSRQVPATVAAVGVGQRGHVIALAGDEVVVDQVHRAPRGEEGQQEQDEGL
ERSEERVLAEQRDERRGADDREDEEQALHAGDLQLTAYAADDGRDAHEASVGVQRGNGHLAEGDAEVEQRGD
GPAAAQADDVGHLAAGELAVGQGCGEHPEDHRGLGAEHRAEADGEEGLPRRGGRRQVA*
AnnotationID:6853GeneID:6852
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 07:07:12
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16604
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30787
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49854How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5276123Stop: 5278243
Length: 2121
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTCTTCCTGGTTGGCCGAGGTCGGCAGGCTGTCGACGCTGGCCGGATGGGCCAGGGCCTTGTTGTCGCT
GGCCAGCGCGGCGGCGGTGACCTGGGCGATCATGAAGCCGGAGTTGACCCCGCCGTTGGCCACCAGGAACGG
CGGCAACTGCGACATGTGCATGTCCATCATCAGCGAGATGCGCCGTTCCGACAGCGAACCGATCTCGGCCAA
CGCCAGGGCCAGGTTGTCGGCGGCCATCGCCACCGGTTCGGCGTGGAAGTTGCCGCCGGAGATCACGTCGCC
CTCGGCGGCGAATACCAGCGGGTTGTCGGACACCGCGTTGGCTTCGATCTCCAGCACCTCGGCGGCCTGGCG
CATCTGGGTCAGGCAGGCGCCCATCACCTGCGGCTGGCAACGCAGCGAATAGGGGTCCTGGACCTTGTCGCA
CTTCTCATGGGAACGCGCCACCTCGCTGCTGGCGGTGAGCAGGTCGCGATAGGCCGCGGCCACGTCGATCTG
CCCACGCTGGCCGCGCGCGGCGTGGATGCGCGCATCGAACGGCGCCCGCGAACCGAGCATGGCCTCGACGCT
GAGCCCGCCGCAGACGGTGGCGGCGGCGAACAGGTCCTCGGCCTCGAACAACCCGCGCAGCGCGTAGGCGGT
GGACACCTGGGTACCATTGAGCAGGGCCAGGCCTTCCTTCGCCGCCAGGGTCAGCGGCTCCAGCCCGGCCAC
CGCCAGCGCCTCGGCGGCCGGCAGCCACTCACCGCGATGGCGCGCCCGGCTTTCGCCGATCAGCACCAGCGA
CATGTGCGCCAGCGGCGCCAGGTCGCCGGAGGCGCCCACCGAGCCTTTCAGCGGGATGTGCGGATAGACCTC
GGCGTTGATCAGCGCGATCAGCGCGTCGATCACCTTGCGGCGGATGCCGGAGAACCCGCGAGCCAGGCTGTT
CACCTTGAGCAGCATGACCAGCCGCACCATGGCGTCGTCCAGCGCCTCGCCGACGCCGGCGGCATGGGACAG
GACGATGGAGCGCTGGAGCTTCTCCAGGTCGGCCGGGGAGATCCGCGTCGAGGCCAGCAGGCCGAAACCGGT
ATTGATGCCGTAGGCGGTGCGGCCCTCGGCGATGATGTTCTCGACACAGGCGACGCTGGCGGCGACCGGCGC
GTCGGCGCTGGGATCCAGGCTCAGGCGCACGGGGGCCAGGTAGGCTTGGCGCAGGTCGGCCAGGGTCAGCTG
GCCGGGTTTCAGATGCAGGCTCATCGAAGGCTCCTTGTTCGGTTCGGCGGGCTCGGCAGCGCCGTCCGCCGG
CGGCGTTTCATGGGATTGAAGGCGGCCGCGCCGCCCTGGAAATTCGTCTCAGGCCCCGTGCGCGGGACGTTC
GAAGGCGCCGGGATCGGCCGGCAGGATCATTCGCGCCGGGGCCTGGCGCGTGGCCTTGCGCCGCGCCACCAG
GTAGTAGAGGACCGCCGGCACCAGCAAGCCGATGATCCAGGAGATATCCACGCCGCCGAGGTGCTCGACCAT
CGGTCCGGTGTACAGCGTGGTCGCCAGGAACGGCATCTGCACCAGCACGCCGAGGGTATAGACGGCGATTCC
CGGCAGGTTCCAGCGACCGTAGCGGCCGTCGGGGTCGGCCAGCGCGGGCACGTCATAGCGCTCGCGGGTGAT
GAAGTAGTAGTCGACCAGGTTCACCGCGCTCCACGGGGTGAAGAAGGTCAGCAGGAACAGGATGAAGGACTT
GAACGCAGCGAGGAACGAGTGCTGGCCGAGCAGCGCGATGAGCGTCGAGGCGCCGACGATCGCGAGGACGAA
GAACAGGCGTTGCACGCGGGTGATCTCCAGTTGACCGCGTACGCTGCTGATGATGGTCGCGATGCACATGAA
GCTTCCGTAGGAGTTCAGCGTGGAAATGGTCACCTTGCCGAAGGCGATGCTGAAGTAGAGCAGCGCGGCGAC
GGTCCCGCTGCTGCCCAGGCCGACGATGTAGGCCACCTCGCGGCCGGCGAACTGGCCGTTGGCCAGGGCTGC
GGAGAACACCCCGAGGACCATCGAGGCCTGGGCGCCGAGCACCGAGCCGAGGCCGACGGCGAGGAAGGTCTT
CCACGACGAGGTGGACGCCGGCAGGTAGCGTGA