ViewGene

Locus Name:
GeneID:
Location:

GeneID:6850
TrivialName: PA14_67160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67160
PAO1 Ortholog Locus:
Sequence Length:1245
Protein Length:414
Start: 5995925
Stop: 5994681
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCTACATCTGCACGGCCCGCAAACGCTCCTCGGCCTGGCGGGCGAGCATCCGCAGCAGCGGAGCGAGGGT
GTGCGGCGGGGTTTCGTCGGCGCGGGTGATGGCGTAGAGGGTGACCGGGAAGGCCGGGCTCAATGGGCGGAT
TGCGGTGCTGTGCGGGTCGGCGCCGAGGGCGGTGAAGGGATCGACCAGCGCCAGGCCGGCCCCAGCCTCCAC
CAGGGCGCGGGCGAGGGCGTAGGTCTGCACGGCGATCTTCACCTGCGGCGGTGGCTCCACGGCGCTGAGGTA
ATCCTCCAGGCGGGCGAACAGCGGGTCGGCGGTGGACAGCCCGATCAGCGCTTCGCCGGCCAGCCCGGCCAG
GCTCAGCGGCTGCCGGCGTTCCGCTTCGGGCCAGTGTTCGCGCGGCGCCAGGGCCACCAATACGCCGCTGGC
GATGGCTTCGCCGCGCAGGCCGGGGTGTTCCGGCTGCTTCAGGCTCAGGGCCAGGTCCAGTTCGCGCATCAG
CAGGCCCTGCACCAGCTCGCGCGAATGCAAGGTGGCCAGTTCGCAGCCGCTCTGCGGATAGCGCGCGCTCCA
TTCGCCGATCGCCCGTGGCAGCAGCGACAGCGCCAGGGCCGGGGTGGCGCCGATGCGCAGGCTGTGGCCCGG
CTGGCGCCGCAGGTTCTGCGCCAGGCGCCGCACGGCCTGCAGGCTATCGCTGAGCTTGGCCACTTCGCGCTC
CAGTTCCAGCGCTTCCGGAGTCGCCAGCAGCTTGCCGCGCACTCGCAAGAACAGCGGGAAGCCCAGCTGCTG
CTCGGCGTGCTGCAAGACCTTGCTCACCGCCGGTTGGGACACGTGCAGCAACTGTGCGGCGCCGCTGACCGA
GCCAGCCTGGCGGATCGCCTGGAACACTTCGATATGGCGGAGCTTCATCGGCGCGAGCCCATAACCTGGATT
TATACCCTGGCCATCTTTATTCATTGTCCTACCGCTGTCATCCGCGCCTATCGTCGAAGCCCTGGAAAACAC
CTGGATAACGATTGTCATGGCTCAGCGGGTTTGCATCATCGGCGCCGGCGTGGTCGGCCTGGCCACGGCCTA
CGCCCTGGTTCGCGAAGGATTCGACGTGACCCTGGTGGAGGCGCGCGAGCGGGGCGGGCTGGAAACCAGCTA
CGCCAATGGCGGGCAGTTGTCCTATCGCTACGTGGCGCCATTGGCCGACAGCGGCGTGCCGGCCCAGGCGCT
CGGCTGGCTGCTGCGCAATGA
Translation:
MLHLHGPQTLLGLAGEHPQQRSEGVRRGFVGAGDGVEGDREGRAQWADCGAVRVGAEGGEGIDQRQAGPSLH
QGAGEGVGLHGDLHLRRWLHGAEVILQAGEQRVGGGQPDQRFAGQPGQAQRLPAFRFGPVFARRQGHQYAAG
DGFAAQAGVFRLLQAQGQVQFAHQQALHQLARMQGGQFAAALRIARAPFADRPWQQRQRQGRGGADAQAVAR
LAPQVLRQAPHGLQAIAELGHFALQFQRFRSRQQLAAHSQEQREAQLLLGVLQDLAHRRLGHVQQLCGAADR
ASLADRLEHFDMAELHRREPITWIYTLAIFIHCPTAVIRAYRRSPGKHLDNDCHGSAGLHHRRRRGRPGHGL
RPGSRRIRRDPGGGARAGRAGNQLRQWRAVVLSLRGAIGRQRRAGPGARLAAAQ*
AnnotationID:6851GeneID:6850
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 06:06:11
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13413
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30783
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49852How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5259610Stop: 5258366
Length: 1245
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTACATCTGCACGGCCCGCAAACGCTCCTCGGCCTGGCGGGCGAGCATCCGCAGCAGCGGAGCGAGGGT
GTGCGGCGGGGTTTCGTCGGCGCGGGTGATGGCGTAGAGGGTGACCGGGAAGGCCGGGCTCAATGGGCGGAT
TGCGGTGCTGTGCGGGTCGGCGCCGAGGGCGGTGAAGGGATCGACCAGCGCCAGGCCGGCCCCAGCCTCCAC
CAGGGCGCGGGCGAGGGCGTAGGTCTGCACGGCGATCTTCACCTGCGGCGGTGGCTCCACGGCGCTGAGGTA
ATCCTCCAGGCGGGCGAACAGCGGGTCGGCGGTGGACAGCCCGATCAGCGCTTCGCCGGCCAGCCCGGCCAG
GCTCAGCGGCTGCCGGCGTTCCGCTTCGGGCCAGTGTTCGCGCGGCGCCAGGGCCACCAATACGCCGCTGGC
GATGGCTTCGCCGCGCAGGCCGGGGTGTTCCGGCTGCTTCAGGCTCAGGGCCAGGTCCAGTTCGCGCATCAG
CAGGCCCTGCACCAGCTCGCGCGAATGCAAGGTGGCCAGTTCGCAGCCGCTCTGCGGATAGCGCGCGCTCCA
TTCGCCGATCGCCCGTGGCAGCAGCGACAGCGCCAGGGCCGGGGTGGCGCCGATGCGCAGGCTGTGGCCCGG
CTGGCGCCGCAGGTTCTGCGCCAGGCGCCGCACGGCCTGCAGGCTATCGCTGAGCTTGGCCACTTCGCGCTC
CAGTTCCAGCGCTTCCGGAGTCGCCAGCAGCTTGCCGCGCACTCGCAAGAACAGCGGGAAGCCCAGCTGCTG
CTCGGCGTGCTGCAAGACCTTGCTCACCGCCGGTTGGGACACGTGCAGCAACTGTGCGGCGCCGCTGACCGA
GCCAGCCTGGCGGATCGCCTGGAACACTTCGATATGGCGGAGCTTCATCGGCGCGAGCCCATAACCTGGATT
TATACCCTGGCCATCTTTATTCATTGTCCTACCGCTGTCATCCGCGCCTATCGTCGAAGCCCTGGAAAACAC
CTGGATAACGATTGTCATGGCTCAGCGGGTTTGCATCATCGGCGCCGGCGTGGTCGGCCTGGCCACGGCCTA
CGCCCTGGTTCGCGAAGGATTCGACGTGACCCTGGTGGAGGCGCGCGAGCGGGGCGGGCTGGAAACCAGCTA
CGCCAATGGCGGGCAGTTGTCCTATCGCTACGTGGCGCCATTGGCCGACAGCGGCGTGCCGGCCCAGGCGCT
CGGCTGGCTGCTGCGCAATGA