ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6840

TrivialName: PA14_66740

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_66740

PAO1 Ortholog Locus:

Sequence Length: 1977

Protein Length: 658

Start: 5963147

Stop: 5961171

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD12824.1| (AJ420989) FHA protein [Bordetella pertussis] Identities = 145/583 (24%), Positives = 205/583 (35%), Gaps = 96/583 (16%)

Sequence:

ATGGGGGTTCCCGGACTCCTGTTCGGGCGGGTTCGATTACATGCGTTCCAGAGTCTTCAGACCGAGCAGCTC
CAGGCCCTGTTCCAGGGTACGGCCGGTCAGCGCGGCGAGACGCAGGCGGCTGTCCTTCTGCGCCGGGTCCTC
GGCGGTGAGGATCGGGCAGTGCTCGTAGAAACTGGAGAACAGCCCGGCCAACTCGTACAGGTAGGCGCAGAG
CAGGTGCGGCACGCCCTTGAGCGCGACGTTGTTGATCAGGTCGCCGAACTGCGCCAGTTGTGCGGCCAGGGC
CAGCTCCTGGGGCTGCTCGAGGACGATCTTCCCGCCCAGTTGCTCGCGGCCCTGGCCGAGCTTGCGGAAGAC
GCTGGCCACGCGGGTGCAGGCGTAGAGCAGGTAGGGTGCGGTGTTGCCTTCGAAGCTGAGCATCAGTTCGAA
GTTGAAGCTGTAGTCGCTGGTGCGGTGCTTGGACAGGTCGGCGTACTTCACCGAGTCGATCCCCACCACCCG
GCCGATCTCGCGCAGCTGGACCTCGTCGAACGGCTCCTCGCCACGCTCGGCGCGCTGCTCGTTGCGTTCCTT
GACCAGCGCATAGGCGCGGCTCTCGGCCTCTTCCAGCAGGTCGATCAGCTTCACCGTACCGCCGTCGCGGGT
CTTGAACGGACGGCCGTCGGCGCCGTTCATGGTACCGAAGCCCATGTGCTCCAGCTCCATGCCGGCCGGAAC
GAAACCGGCGCGCCGCGCCACTTCGAAGACCTGCTGGAAGTGCAGGGCCTGGCGCTGGTCGACGAAGTACAG
CACGCGGTCGGCGTGCAGCACGTTGTGCCGATAACGCATGGCGGCGAGGTCGGTGGTGGCGTAGAGGTAGCC
GCCGCCGGCCTTCTGCACGATCACCGGGAGTGGATTGCCCTCGGCGTTCCTGAACTCTTCGAGGAAGACGCA
CAACGCGCCGTTGTCTTCGGTGAGCAGGCCCTTGGCGGTCAGGTCGGCGACCACCTGGGCGAGGTCGTCGTT
GTAGGCGCTCTCGCCCATGACGTCGGCCATGCTCAGCTTCACGCCGAGACGGTCGTAGACCTTCTGGCAGTG
CGACAGGGAAATCTCGTTGAAGCGGGTCCACAGGCGCAGGCAGTCAGGGTCGCCGGCCTGCAGCTTGACCAC
CAGTTCGCGGGCGCGGTCGGCGAATTCGGGAGACTCGTCGAAGCGTTTCTTCGCCGCGCGGTAGAAGACCTC
CAGGTCGTGCAGCTCGGCCTCGGCGTCGACCGGTTGCTCTTCCAGGTAGGCGAGCAGCATGCCGAACTGGGT
GCCCCAGTCGCCGACGTGGTTCTGCCGGATCACCGTGTCGCCGAGGAACTCGAGGACGCGCGCGACGGCGTC
GCCGATGATGGTCGAGCGCAGGTGGCCGACGTGCATCTCCTTGGCCAGGTTCGGCGAGGACAGGTCGATCAC
CACGCGCTGCGCCGGGCCTGCCTTGCGCACGCCGAGACGTTCGTCGGCGAGGGCGCGGTCGAGGCTGGCGGC
GAGCCAGACGTGATCCTGGAAGAAGTTGAGGAAGCCGGGGCCGGCGATCTCCACCTTGGCCAGTTGCTCGTG
GGCGGGGATTGCCTCGACCAGCCTGGCGGCCAGGTCGCGCGGCTTCATCCCGGCCGGCTTGGCCAGCATCAT
GGCGATGTTGCTGGCGAAATCGCCGTGGCTACGGTCCTTGGTGTTCTCCACCTGGATGTCCGGGGTCAGGCC
GGCGGGCAGGGTGCCGTCCGCGGTCAGTTGGTCGAGGGCTTGCTGGATCAGCTGGCGAATCGTGTCTTTCAT
CGTTCTCTCCGTGCTCGCGGGCAGAGGGGCGGCGCGCGACGGTCGGGCAGGGGAAGGGCCGGCGGATGCGGC
GCTCCGAAGTTCACTCCCCGCGATGCGCGCGGGGTGGCCGGTCGAGGCTCAGAACCGCGCATTATCCGTGGG
CGGACAGGCGTTGCCAACCGTTGCGGCGATTAG

Translation:

MGVPGLLFGRVRLHAFQSLQTEQLQALFQGTAGQRGETQAAVLLRRVLGGEDRAVLVETGEQPGQLVQVGAE
QVRHALERDVVDQVAELRQLCGQGQLLGLLEDDLPAQLLAALAELAEDAGHAGAGVEQVGCGVAFEAEHQFE
VEAVVAGAVLGQVGVLHRVDPHHPADLAQLDLVERLLATLGALLVAFLDQRIGAALGLFQQVDQLHRTAVAG
LERTAVGAVHGTEAHVLQLHAGRNETGAPRHFEDLLEVQGLALVDEVQHAVGVQHVVPITHGGEVGGGVEVA
AAGLLHDHREWIALGVPELFEEDAQRAVVFGEQALGGQVGDHLGEVVVVGALAHDVGHAQLHAETVVDLLAV
RQGNLVEAGPQAQAVRVAGLQLDHQFAGAVGEFGRLVEAFLRRAVEDLQVVQLGLGVDRLLFQVGEQHAELG
APVADVVLPDHRVAEELEDARDGVADDGRAQVADVHLLGQVRRGQVDHHALRRACLAHAETFVGEGAVEAGG
EPDVILEEVEEAGAGDLHLGQLLVGGDCLDQPGGQVARLHPGRLGQHHGDVAGEIAVATVLGVLHLDVRGQA
GGQGAVRGQLVEGLLDQLANRVFHRSLRARGQRGGARRSGRGRAGGCGAPKFTPRDARGVAGRGSEPRIIRG
RTGVANRCGD*

AnnotationID:6841 GeneID:6840

AnnotatorUID: diggins

Modification Date/Time: 2005-03-14 18:06:16

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13394

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30763