ViewGene

Locus Name:
GeneID:
Location:

GeneID:6835
TrivialName: PA14_66430
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_66430
PAO1 Ortholog Locus:
Sequence Length:1797
Protein Length:598
Start: 5928193
Stop: 5926397
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 116/427 (27%), Positives = 161/427 (37%), Gaps = 84/427 (19%)
Sequence:
GTGGGTGGTGCTCGCCGGGTGGCAGGCCAGGGACTTGGCGTCGCCGATGTTGACCAGCCGCACCACCAGCTT
CAAGGCGTCGATGAAGCGCGCGCCAGCGGCGCTGCCGCCCTGGATACCGAAGGACAGGATCGCCGCCGGGCG
GCCCCCCAGGTAGCGCCGGGCCAGGGCGTGCTCGGGGTTGTCGGCGAGGCCGGCGTATTTCACCCAGGCCAC
CTGCGGATGCTGCTGCAGGTAGCGGGCCACGGCGAGGGCGTTGTCGCAGTGGCGCTCCATGCGCAGCGCCAG
GGTCTCCAGGCCTTGGAGGATGAGGAAGGCGTTGAACGGCGAGAGCGCCGCGCCCATGTTGCGCAGCGGTAC
CACCCGGCAGCGGCCGATGAAGGCGGCGGGTCCGAAGGCCTCGGTGTAGGTGACGCCGTGGTAGGACGGATC
GGGCGTGTTCAGCAGCGGGAAGCGCGACTTGTTCGCCGCCCAGTCGAATTTGCCGGAGTCGACCACGATCCC
GCCGATGCTGGTGCCGTGGCCGCCCATGTACTTGGTCAGCGAGTGCACGACGATGTCGGCGCCGTGCTCGAA
CGGCCGGCAGAGCACCGGGGTGGCTACCGTGTTGTCGACGATCAGTGGCACGCCGTGGCGGTGAGCGGCGTC
GGCCAGTGCCTGCAGGTCGATGATGTTGCCCGCCGGGTTGCCGATGGTTTCGCAGAACACGGCCTTGGTCCG
CTCGTCAATCAGCGCTTCCAGGGCGGCGACGTCGTCGTGGGCGGCGAAGCGCGCCTGGATGCCGATGCGTGG
CAGGGTGTGGGCCAGCAGGTTGTAGGTGCCGCCGTAGAGCTTGGCCACCGAGACGATGTTGTCGCCGGCCTC
GGCGACGGTCTGGATCGCGTAGGTGATGGCCGCCATCCCCGAGGCCACCGCCAGCGCCCCGACCCCGCCTTC
CAGCGCCGCGACGCGCTGTTCCAGTACGTCGTTGGTGGGGTTCATGATCCGTGTGTAGATGTTGCCCGGTAC
CTTCAGGTCGAACAGGTCGGCGCCATGCTGGGTGTCGTCGAAGGCGTAGGAAGTGGTCTGGTAGATCGGCAC
CGCCACCGCGCGGGTGGTCGGGTCAGGGCTGTAGCCGGCGTGGACGGCCAGGGTTTCCAGTTTCATGCAGCG
TTCCTTCGGGCAGATTGGAAGGACGCAGCATGGGAAAGCGCGCCGGGCGGGTCAATGCGCCCGGGCAAGGAA
AAGCGTGCCTGGTTAGACCGTTGTGTTCGCCGCTTATGCCTGTCAGCGCAGGCCGATGTAGATGTTGTAGGC
GCTGATCAGGGTGATCAGGGTGCCGACGATGACCAGCAGGGTGCGCGGCGAAAGCTTCTTGCACAGCAGGGC
GGCGAACGGTGCGGCGAACAGGCCGCCGAAGACCAGCCCGGCGACCATCTTCCAGGTGTCCGGCTGGCCAGC
GAGGAGGATGAAGGAGGTGGCGCTGGCGATGGTCAGGAAGAACTCGGCGAAGTTCACCGAGCCGATGGTGGT
GCGCGGGTCGCTACCCGAGCCGATCAGGCTGCTGGTGACCACCGGGCCCCAGCCGCCGCCGCCGGCAGCATC
GACGAAGCCGCCGAAGAGTGCCAGCTTGGCCACGTGGCGCGGTGCCCGGCGCTTGATCACGTGGCGGTAGGC
CTTGCTCAGGATGTACAGGCCCATCAGCAGCAGGTAGGCGGAGATGAAGGGCTTGAGCTGGTGGCCGTCGAA
GCGGGTGATCAGCACGGCGCCGAGCACCGCGCCGATCATTCCCGGCAGCAGCAGGCGGAGGAAGAGTGA
Translation:
MGGARRVAGQGLGVADVDQPHHQLQGVDEARASGAAALDTEGQDRRRAAPQVAPGQGVLGVVGEAGVFHPGH
LRMLLQVAGHGEGVVAVALHAQRQGLQALEDEEGVERRERRAHVAQRYHPAAADEGGGSEGLGVGDAVVGRI
GRVQQREARLVRRPVEFAGVDHDPADAGAVAAHVLGQRVHDDVGAVLERPAEHRGGYRVVDDQWHAVAVSGV
GQCLQVDDVARRVADGFAEHGLGPLVNQRFQGGDVVVGGEARLDADAWQGVGQQVVGAAVELGHRDDVVAGL
GDGLDRVGDGRHPRGHRQRPDPAFQRRDALFQYVVGGVHDPCVDVARYLQVEQVGAMLGVVEGVGSGLVDRH
RHRAGGRVRAVAGVDGQGFQFHAAFLRADWKDAAWESAPGGSMRPGKEKRAWLDRCVRRLCLSAQADVDVVG
ADQGDQGADDDQQGARRKLLAQQGGERCGEQAAEDQPGDHLPGVRLASEEDEGGGAGDGQEELGEVHRADGG
ARVATRADQAAGDHRAPAAAAGSIDEAAEECQLGHVARCPALDHVAVGLAQDVQAHQQQVGGDEGLELVAVE
AGDQHGAEHRADHSRQQQAEEE*
AnnotationID:6836GeneID:6835
AnnotatorUID: diggins
Modification Date/Time: 2005-03-14 12:12:04
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16590
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30753
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49837How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5191876Stop: 5190080
Length: 1797
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGTGGTGCTCGCCGGGTGGCAGGCCAGGGACTTGGCGTCGCCGATGTTGACCAGCCGCACCACCAGCTT
CAAGGCGTCGATGAAGCGCGCGCCAGCGGCGCTGCCGCCCTGGATACCGAAGGACAGGATCGCCGCCGGGCG
GCCCCCCAGGTAGCGCCGGGCCAGGGCGTGCTCGGGGTTGTCGGCGAGGCCGGCGTATTTCACCCAGGCCAC
CTGCGGATGCTGCTGCAGGTAGCGGGCCACGGCGAGGGCGTTGTCGCAGTGGCGCTCCATGCGCAGCGCCAG
GGTCTCCAGGCCTTGGAGGATGAGGAAGGCGTTGAACGGCGAGAGCGCCGCGCCCATGTTGCGCAGCGGTAC
CACCCGGCAGCGGCCGATGAAGGCGGCGGGTCCGAAGGCCTCGGTGTAGGTGACGCCGTGGTAGGACGGATC
GGGCGTGTTCAGCAGCGGGAAGCGCGACTTGTTCGCCGCCCAGTCGAATTTGCCGGAGTCGACCACGATCCC
GCCGATGCTGGTGCCGTGGCCGCCCATGTACTTGGTCAGCGAGTGCACGACGATGTCGGCGCCGTGCTCGAA
CGGCCGGCAGAGCACCGGGGTGGCTACCGTGTTGTCGACGATCAGTGGCACGCCGTGGCGGTGAGCGGCGTC
GGCCAGTGCCTGCAGGTCGATGATGTTGCCCGCCGGGTTGCCGATGGTTTCGCAGAACACGGCCTTGGTCCG
CTCGTCAATCAGCGCTTCCAGGGCGGCGACGTCGTCGTGGGCGGCGAAGCGCGCCTGGATGCCGATGCGTGG
CAGGGTGTGGGCCAGCAGGTTGTAGGTGCCGCCGTAGAGCTTGGCCACCGAGACGATGTTGTCGCCGGCCTC
GGCGACGGTCTGGATCGCGTAGGTGATGGCCGCCATCCCCGAGGCCACCGCCAGCGCCCCGACCCCGCCTTC
CAGCGCCGCGACGCGCTGTTCCAGTACGTCGTTGGTGGGGTTCATGATCCGTGTGTAGATGTTGCCCGGTAC
CTTCAGGTCGAACAGGTCGGCGCCATGCTGGGTGTCGTCGAAGGCGTAGGAAGTGGTCTGGTAGATCGGCAC
CGCCACCGCGCGGGTGGTCGGGTCAGGGCTGTAGCCGGCGTGGACGGCCAGGGTTTCCAGTTTCATGCAGCG
TTCCTTCGGGCAGATTGGAAGGACGCAGCATGGGAAAGCGCGCCGGGCGGGTCAATGCGCCCGGGCAAGGAA
AAGCGTGCCTGGTTAGACCGTTGTGTTCGCCGCTTATGCCTGTCAGCGCAGGCCGATGTAGATGTTGTAGGC
GCTGATCAGGGTGATCAGGGTGCCGACGATGACCAGCAGGGTGCGCGGCGAAAGCTTCTTGCACAGCAGGGC
GGCGAACGGTGCGGCGAACAGGCCGCCGAAGACCAGCCCGGCGACCATCTTCCAGGTGTCCGGCTGGCCAGC
GAGGAGGATGAAGGAGGTGGCGCTGGCGATGGTCAGGAAGAACTCGGCGAAGTTCACCGAGCCGATGGTGGT
GCGCGGGTCGCTACCCGAGCCGATCAGGCTGCTGGTGACCACCGGGCCCCAGCCGCCGCCGCCGGCAGCATC
GACGAAGCCGCCGAAGAGTGCCAGCTTGGCCACGTGGCGCGGTGCCCGGCGCTTGATCACGTGGCGGTAGGC
CTTGCTCAGGATGTACAGGCCCATCAGCAGCAGGTAGGCGGAGATGAAGGGCTTGAGCTGGTGGCCGTCGAA
GCGGGTGATCAGCACGGCGCCGAGCACCGCGCCGATCATTCCCGGCAGCAGCAGGCGGAGGAAGAGTGA