ViewGene

Locus Name:
GeneID:
Location:

GeneID:6832
TrivialName: PA14_66280
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_66280
PAO1 Ortholog Locus:
Sequence Length:2772
Protein Length:923
Start: 5904581
Stop: 5907352
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCACCATAAATTCGATATCGACGATACCACCGGCATCGTGCTTGAGATCGAAGGCTGCCGTGGCCTCGAA
GGCATTCGAGGCGGTGCCGGCGGCGGTCGCGCGGGTTCCCAGGTTGTCGCGCATCTTGGCGCGCATTTCGCT
GACTTCGGTGCGCAACGCGTCGAGATCGCGCGGCCTCGCCAGCACCTCGGCACGTACCGCCTCGAAGCTCGC
CTGCACCCGCCGGCAACCGGCCAGCACCCGGGCGCGGACCAACGCCTGGTGCTCCCAGGTCCAGGCCTCCTG
CTCCTGGTAGCGCTGGAAGGCGCCCAGCGAACTCACCAGCAGGCCGGCCGCGCCGCTCGGACGCAGGCGCAT
GTCGACCTCGTAGAGGGTGCCGGATGGCGTCTGCGCGGTGAGGAAATGGATGATCTTCTGCCCCAGGCGGGT
AAAGAACTGCGCGCCATCGATGGATTTGCCGCCATCGGTCTCGCAGTGGGGGTCGCCGTCATGGATAAACAC
CAGGTCGAGGTCCGAGCCATGACCGAACTCCAGCCCGCCGACCTTGCCGTAGCCGACGATGACGAAGTCCGG
ATCGCACGGCGTGCCGTCGGCGCGCAACGGCCGGCCGTGACGCTGCACCAACTGCCGCCAGGCCAGTTCGAG
GACCTCGACGAGGATCGCCTCGGCCAGCCAGGTCAGGTAGTCGCTGACCTTCATCAACGGCAGCGTGCCGGC
GATCTCCGAGGCCGCCACCCGCAGCCCGTGGGCCAGCTTGAAGTGACGAAGGGTCTCCATCTGCTGCTCGAG
GTCGTCCTCGGGAATCCGCATCAGCCGTTCGCGCAGCTCGGCGGCCAGCTCGGCGGCCTGTGGAGGACGGAA
CAGGCGCCCCTCGTTGAGCAGTTCGTCGAGCAGGATCGGGAACCGCGCGATCTGCTCGGCAACCATCGGGCT
GGCCGCGCAGAGGGTCAGCAGGCGCTCCAGTGCGCCGGGGTTCTCGGTCAGCAACACCAGGTAGGCGGAACG
CCGCGCCACCGCTTCCACCAGCGGCAGAACCCGCTCCAGCACCAGGTCCGGCTGGGGGTTTTCCACGGTCAT
CGCCAGCAGGCGCGGAACGAAGGCATCCAGGCGTTCCCGGCCGAGACGCTGCATCGCTCGTACCTGGGGACC
GTGGCGCAGATCGCTGAGACGCTTCCAGGCCGCCTCGGCATCGACGAAGCCGGCGTCGGCCAGTTGCCGACT
GGCCGACTCCTCGTCCAGCGCCTCCTCCCACAGCGGGATCCACTCGGCGCCGACGCTGCCGCAGGCCGCCTC
GCCGCTTTCGTCCTCGTCCGGGTCGGCGATCACCTGGCGGAAGTGCCAGTCGATGCGCGCCCGCCAGTGGCT
CAGGCGCTCGTGGAATGCGGCCCAACTGGCGAAGCCCATGATGAAGGCCACGCGGATGCGGTCGTATTCGTC
GCTGGGCAGCATTTGCGTCTGCCGGTCGGCCAGCGCCTGGATGGCATGCTCGGCGTAGCGCAGGAACTCGTA
GCCGCCGCGCAGCTCCTCGACCACCGCCGGCGGCAGGTAGCCCTGCCCCTCCAGGGTCGCCAGCACCTTCAG
CAGCGGCCGTTGCTGCAAGCTCAGGTCGCGCCCGCCATGGATCAGCTGGAAGGCCTGGGCGATGAACTCCAC
CTCGCGGATACCGCCTTCGCCCAGCTTGATGTTTTCCGACATACCCTTGCGCCGGACCTCCTGCTGGATCAG
CTGCTTCATGGTGCGCAGCGCCTCGATGGCGGAGAAGTCCAGGTAGCGCCGATAGACGAACGGCCGCAGCAT
GCCGAGCAGTTGCTCGCCTGCCTGCTGGTCGCCGCCGACCACCCGCGCCTTGATCATCGCGTAGCGCTCCCA
GTCGCGCCCCTGGTCCTGGTAGTACTGCTCCAGCGCGGCGAAGCTGTAGACCAGCGGTCCGCTGGAGCCGTA
GGGACGCAGGCGCATGTCGACGCGGAAGACGAAGCCGTCGACGGTGATCGCATCCAGCGCCTTGATCAGCTT
CTGCCCCAGGCGGGTGAAGAACTCCTGGTTGTCCAGCGAACGCTTCGCCCCCTCGGTCTCGCCGCCCTCCGG
GTAACCGAAGATCAGGTCGATGTCCGACGACAGGTTGAGCTCCACCGCGCCCAGCTTGCCCATGCCGAGGAC
CACCATCCGCTGCGGTTCGCCGGAGCGCCGGCCGATCGGCGTGCCGAACTGCTCGCACTGGCGCCGATGGAG
CCACTCGCAAGCCAGGTCGATGCAGGCGTCGGCCAGGCCCGACAGGTCGCGACAGGTTTCCGCCAGCGCGGC
GCGGCGGGTCAGGTCGCGCCAGATGATGCGCAGTTGCTGGCGTGTGCGGAAACGTCGCAGGCGCCGACCGAG
TTCGTCCTCGTCGGCGCAATCCTCCAGCCGCGCCTGCAACTGGCTGCGCAATTCGCCGGGCGCGTGGGGGTT
CTCCAGCTCGCCGCGTTCGGCCAGATCCAGCAGCATCGCCGGGTCGCGCACTGCCTGCTCGGCGACGAAATC
GCTGGCCGCAGCGACCCGTCGGAAATCCTCCAGGCGCTCCTCGGGCCAGGCCTCCAGGCGGGCCAGGGCGGC
GGCATCGAGGGCGGCGACAGCGGAGCGGAGGGCAGTCCCGGCGCGTTCGGCGGCGGGCAGCAGGGTGGCCGG
CAGATTCGCCAGCGAAGGCAGGCTCATGGTCTATCCTGTTTGGGCTTCCGACCGAAGACCACAGGCTCGACG
CACAACGTCGAAAAGGCTCTACATCGGGCCTTATAG
Translation:
MHHKFDIDDTTGIVLEIEGCRGLEGIRGGAGGGRAGSQVVAHLGAHFADFGAQRVEIARPRQHLGTYRLEAR
LHPPATGQHPGADQRLVLPGPGLLLLVALEGAQRTHQQAGRAARTQAHVDLVEGAGWRLRGEEMDDLLPQAG
KELRAIDGFAAIGLAVGVAVMDKHQVEVRAMTELQPADLAVADDDEVRIARRAVGAQRPAVTLHQLPPGQFE
DLDEDRLGQPGQVVADLHQRQRAGDLRGRHPQPVGQLEVTKGLHLLLEVVLGNPHQPFAQLGGQLGGLWRTE
QAPLVEQFVEQDREPRDLLGNHRAGRAEGQQALQCAGVLGQQHQVGGTPRHRFHQRQNPLQHQVRLGVFHGH
RQQARNEGIQAFPAETLHRSYLGTVAQIAETLPGRLGIDEAGVGQLPTGRLLVQRLLPQRDPLGADAAAGRL
AAFVLVRVGDHLAEVPVDARPPVAQALVECGPTGEAHDEGHADAVVFVAGQHLRLPVGQRLDGMLGVAQELV
AAAQLLDHRRRQVALPLQGRQHLQQRPLLQAQVAPAMDQLEGLGDELHLADTAFAQLDVFRHTLAPDLLLDQ
LLHGAQRLDGGEVQVAPIDERPQHAEQLLACLLVAADHPRLDHRVALPVAPLVLVVLLQRGEAVDQRSAGAV
GTQAHVDAEDEAVDGDRIQRLDQLLPQAGEELLVVQRTLRPLGLAALRVTEDQVDVRRQVELHRAQLAHAED
HHPLRFAGAPADRRAELLALAPMEPLASQVDAGVGQARQVATGFRQRGAAGQVAPDDAQLLACAETSQAPTE
FVLVGAILQPRLQLAAQFAGRVGVLQLAAFGQIQQHRRVAHCLLGDEIAGRSDPSEILQALLGPGLQAGQGG
GIEGGDSGAEGSPGAFGGGQQGGRQIRQRRQAHGLSCLGFRPKTTGSTHNVEKALHRAL*
AnnotationID:6833GeneID:6832
AnnotatorUID: diggins
Modification Date/Time: 2005-03-14 11:11:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16585
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30747
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49834How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5168264Stop: 5171035
Length: 2772
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCACCATAAATTCGATATCGACGATACCACCGGCATCGTGCTTGAGATCGAAGGCTGCCGTGGCCTCGAA
GGCATTCGAGGCGGTGCCGGCGGCGGTCGCGCGGGTTCCCAGGTTGTCGCGCATCTTGGCGCGCATTTCGCT
GACTTCGGTGCGCAACGCGTCGAGATCGCGCGGCCTCGCCAGCACCTCGGCACGTACCGCCTCGAAGCTCGC
CTGCACCCGCCGGCAACCGGCCAGCACCCGGGCGCGGACCAACGCCTGGTGCTCCCAGGTCCAGGCCTCCTG
CTCCTGGTAGCGCTGGAAGGCGCCCAGCGAACTCACCAGCAGGCCGGCCGCGCCGCTCGGACGCAGGCGCAT
GTCGACCTCGTAGAGGGTGCCGGATGGCGTCTGCGCGGTGAGGAAATGGATGATCTTCTGCCCCAGGCGGGT
AAAGAACTGCGCGCCATCGATGGATTTGCCGCCATCGGTCTCGCAGTGGGGGTCGCCGTCATGGATAAACAC
CAGGTCGAGGTCCGAGCCATGACCGAACTCCAGCCCGCCGACCTTGCCGTAGCCGACGATGACGAAGTCCGG
ATCGCACGGCGTGCCGTCGGCGCGCAACGGCCGGCCGTGACGCTGCACCAACTGCCGCCAGGCCAGTTCGAG
GACCTCGACGAGGATCGCCTCGGCCAGCCAGGTCAGGTAGTCGCTGACCTTCATCAACGGCAGCGTGCCGGC
GATCTCCGAGGCCGCCACCCGCAGCCCGTGGGCCAGCTTGAAGTGACGAAGGGTCTCCATCTGCTGCTCGAG
GTCGTCCTCGGGAATCCGCATCAGCCGTTCGCGCAGCTCGGCGGCCAGCTCGGCGGCCTGTGGAGGACGGAA
CAGGCGCCCCTCGTTGAGCAGTTCGTCGAGCAGGATCGGGAACCGCGCGATCTGCTCGGCAACCATCGGGCT
GGCCGCGCAGAGGGTCAGCAGGCGCTCCAGTGCGCCGGGGTTCTCGGTCAGCAACACCAGGTAGGCGGAACG
CCGCGCCACCGCTTCCACCAGCGGCAGAACCCGCTCCAGCACCAGGTCCGGCTGGGGGTTTTCCACGGTCAT
CGCCAGCAGGCGCGGAACGAAGGCATCCAGGCGTTCCCGGCCGAGACGCTGCATCGCTCGTACCTGGGGACC
GTGGCGCAGATCGCTGAGACGCTTCCAGGCCGCCTCGGCATCGACGAAGCCGGCGTCGGCCAGTTGCCGACT
GGCCGACTCCTCGTCCAGCGCCTCCTCCCACAGCGGGATCCACTCGGCGCCGACGCTGCCGCAGGCCGCCTC
GCCGCTTTCGTCCTCGTCCGGGTCGGCGATCACCTGGCGGAAGTGCCAGTCGATGCGCGCCCGCCAGTGGCT
CAGGCGCTCGTGGAATGCGGCCCAACTGGCGAAGCCCATGATGAAGGCCACGCGGATGCGGTCGTATTCGTC
GCTGGGCAGCATTTGCGTCTGCCGGTCGGCCAGCGCCTGGATGGCATGCTCGGCGTAGCGCAGGAACTCGTA
GCCGCCGCGCAGCTCCTCGACCACCGCCGGCGGCAGGTAGCCCTGCCCCTCCAGGGTCGCCAGCACCTTCAG
CAGCGGCCGTTGCTGCAAGCTCAGGTCGCGCCCGCCATGGATCAGCTGGAAGGCCTGGGCGATGAACTCCAC
CTCGCGGATACCGCCTTCGCCCAGCTTGATGTTTTCCGACATACCCTTGCGCCGGACCTCCTGCTGGATCAG
CTGCTTCATGGTGCGCAGCGCCTCGATGGCGGAGAAGTCCAGGTAGCGCCGATAGACGAACGGCCGCAGCAT
GCCGAGCAGTTGCTCGCCTGCCTGCTGGTCGCCGCCGACCACCCGCGCCTTGATCATCGCGTAGCGCTCCCA
GTCGCGCCCCTGGTCCTGGTAGTACTGCTCCAGCGCGGCGAAGCTGTAGACCAGCGGTCCGCTGGAGCCGTA
GGGACGCAGGCGCATGTCGACGCGGAAGACGAAGCCGTCGACGGTGATCGCATCCAGCGCCTTGATCAGCTT
CTGCCCCAGGCGGGTGAAGAACTCCTGGTTGTCCAGCGAACGCTTCGCCCCCTCGGTCTCGCCGCCCTCCGG
GTAACCGAAGATCAGGTCGATGTCCGACGACAGGTTGAGCTCCACCGCGCCCAGCTTGCCCATGCCGAGGAC
CACCATCCGCTGCGGTTCGCCGGAGCGCCGGCCGATCGGCGTGCCGAACTGCTCGCACTGGCGCCGATGGAG
CCACTCGCAAGCCAGGTCGATGCAGGCGTCGGCCAGGCCCGACAGGTCGCGACAGGTTTCCGCCAGCGCGGC
GCGGCGGGTCAGGTCGCGCCAGATGATGCGCAGTTGCTGGCGTGTGCGGAAACGTCGCAGGCGCCGACCGAG
TTCGTCCTCGTCGGCGCAATCCTCCAGCCGCGCCTGCAACTGGCTGCGCAATTCGCCGGGCGCGTGGGGGTT
CTCCAGCTCGCCGCGTTCGGCCAGATCCAGCAGCATCGCCGGGTCGCGCACTGCCTGCTCGGCGACGAAATC
GCTGGCCGCAGCGACCCGTCGGAAATCCTCCAGGCGCTCCTCGGGCCAGGCCTCCAGGCGGGCCAGGGCGGC
GGCATCGAGGGCGGCGACAGCGGAGCGGAGGGCAGTCCCGGCGCGTTCGGCGGCGGGCAGCAGGGTGGCCGG
CAGATTCGCCAGCGAAGGCAGGCTCATGGTCTATCCTGTTTGGGCTTCCGACCGAAGACCACAGGCTCGACG
CACAACGTCGAAAAGGCTCTACATCGGGCCTTATAG