ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6824

TrivialName: PA14_65890

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_65890

PAO1 Ortholog Locus:

Sequence Length: 1557

Protein Length: 518

Start: 5869747

Stop: 5871303

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAA74222.1| (M38698) lcrC gene product [Rhizobium sp.] Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 12/179 (6%)

Sequence:

GTGGATGGTGATGATCAGTTGCGGTTCGGCCGGGTCGTCGCGCAGCTTACGACGCAGGCGGCCGACCAGCAC
GTCGATGGAGCGATCGCTGGGCAGCCACTCGCGGTTGCGGATCTGGTCCATCAACTGGTCGCGGCTCAGGGT
ATGCCCGCTGTTGCGCAGGAAGGCGCCGAGCAATTGGAATTCGCCGTGGGTGAGCAGGGTCTCGTTGCCCGC
GTGGTCGATCAGGCGGCGCCGGTCGGCGTCCAGCAGCCAGTCGCCGAACTGCCTGAGGGCCTGCCGGGCGGG
GGCGGCGCTGGCCTGGGCATGGCGCACCCGGCGGATCAGGTTCTTCGCCCGCGACACCAGTTCGCGCGGGTT
CAGCGGCTTGATCACGTAGTCGTCGGCGCCGCACTCCAGGCCGACGATGCGATCGATCTCGTCGTTGCGCCC
GGTGATCAGGATGATCCCCACCTCGGAGCGCACCCGCAGCTCGCGGGTCAGGGTCAGGCCGTCCTTGCCGGG
CAGGCGGATGTCCAGCAGCACCAGCTCGACCGGCTGGCCGAGATGGGCGCACTCGGCAAGGCAGGCTTCCGC
CTGCTCGGCGTTGCCGGCGCAGAGGACGTCATAGCCCTCCTCGCCGAGATAGGCCTGGAGAAGCTCACGAAT
CACCGGGTCGTCGTCGACCACCAATACGCGCGGAACCATCGCCATCACCTTGCGCCTCCGGCGGGCCGGGGC
GTTTCTTGTTCTGGGTTGTCGGACGGTGGGCGGAAGGTGCCGGGGCGCCTTCCGCTGCCAGCAGCAGCCTAT
CCACTACTGAACGGACGATCAACAAGCTTCCGTCGCACGCCGGAAGCGGCGATGGGCGCCCGCCTCCAGGCC
ATCCACCCAGGCCTCGCAGATCTGCACGCCCTGCCGCGGCGTGAAGGTCGCGGGATTCAGCCCAGACTCCAG
CCACAGCCCGTCGAGCAGGGCGCTGAGGCTGATGGCCGCCAGTTCCGCGTCGAAGTCCGCCCAGCCGCCCTC
CTCCGCCAGTTGCCGCAGCACGCCGACCAGCAGCGCCCGGTACTCGCCATAGGAATGGTCGTGGACCCGCCC
GATCGCTTCGATGCTGCCCACCGCACCCCAGAACGCCAGCCAGGCGTCGAGCAATTGCGGATCGAGCAGCTC
GGCGGAGAAGGATGCCTCGAAGAACGCCGAGAGCCGCGGGCGGGCGCCGCCCGGCGCGGTGTCGATGGCACC
GCGGAGCAGGCGCATGACGCGTCCGGTGACCGCCAGGTAGGCCTCGGCCACCAGCGCGTCCTTGCCATCGTA
GTGGTGATTGATCAGGCCCACCGATACCCCGGCCTCGGTGCAGATCTTGCGCACCGAGGCGCCCTGGAAGCC
ATGCCGCTTCAGGCAGGCCAGGGTCGCCTCGATCAGCAGCGCCTTGCGCTGCTCTGGTTCCAGACGGGAAAA
GCGCACTTCCTGGTTCATCCTTTCGCGGCTCCTGCTCGTCGCCCGCGACCACCGGCGGGCAGCCCCGATGAT
CGCAGGTTACGTGGCGCCCGTCTCACTGGCTGGCCCAGGCGTTGA

Translation:

MDGDDQLRFGRVVAQLTTQAADQHVDGAIAGQPLAVADLVHQLVAAQGMPAVAQEGAEQLEFAVGEQGLVAR
VVDQAAPVGVQQPVAELPEGLPGGGGAGLGMAHPADQVLRPRHQFARVQRLDHVVVGAALQADDAIDLVVAP
GDQDDPHLGAHPQLAGQGQAVLAGQADVQQHQLDRLAEMGALGKAGFRLLGVAGAEDVIALLAEIGLEKLTN
HRVVVDHQYARNHRHHLAPPAGRGVSCSGLSDGGRKVPGRLPLPAAAYPLLNGRSTSFRRTPEAAMGARLQA
IHPGLADLHALPRREGRGIQPRLQPQPVEQGAEADGRQFRVEVRPAALLRQLPQHADQQRPVLAIGMVVDPP
DRFDAAHRTPERQPGVEQLRIEQLGGEGCLEERREPRAGAARRGVDGTAEQAHDASGDRQVGLGHQRVLAIV
VVIDQAHRYPGLGADLAHRGALEAMPLQAGQGRLDQQRLALLWFQTGKAHFLVHPFAAPARRPRPPAGSPDD
RRLRGARLTGWPRR*

AnnotationID:6825 GeneID:6824

AnnotatorUID: diggins

Modification Date/Time: 2005-03-14 07:07:25

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16578

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30731