ViewGene

Locus Name:
GeneID:
Location:

GeneID:6813
TrivialName: PA14_65620
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65620
PAO1 Ortholog Locus:
Sequence Length:1761
Protein Length:586
Start: 5844020
Stop: 5845779
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: TRUE
Missense Discrepancy:TRUE
Comments:
Sequence:
TTGCAGGTCCTCGCCCTTGACCACGAAACCATAGCCGGCGTCGGAAGCGATCACGAACAGCGCATCGTCGTC
CGGCAGCAGCACGCATTCGAAGCTGGCCCCCGGCGGAGGCGTCAGCCGGCCGCTGAGTGGCTCGCCCTGGCC
TCGCGCGGACGGCAGGCTGTGGGCCGGCAGCGAGTAGCTGCGCCCGGTGGAGTCGATGAACACCGCATACTG
GTTCGAGCGTCCCGGCGCGGCGGCCTTGAAGCCGTCGCCGGCCTTGTAGGAGAGGCCGGCGGCGTCGATGTC
GTGGCCCTTGGCGCAACGCACCCAGCCTTTTTCCGAGAGCACCACGGTCACCGGTTCGGTGGGCATCAGCTC
GGTTTCCGACAGCGCGCGGGCCTCGGCGCGGGCGACGATCGGCGAACGGCGGTCGTCGCCGTAGGTCTCGGC
GTCCTTGATCAGCTCCTCGCGCACCAGCTTCTTCAGCTTGGCCTCGCTGCCGAGCAGGGTCTGCAGGCGCTT
CTGCTCCTTCAGCAACTCTTCCTGCTCGCCGCGGATCTTCATCTCTTCCAGGCGTGCCAACTGGCGCAGGCG
GGTGTCGAGGATGTAGTCGGCCTGCACCTCGCTGAGTTCGAAGCGCTCCATCAGCACCGCCTTGGGCTGATC
CTCGGTGCGGATGATGTGGATCACCTCGTCGAGGTTGAGGAAGGCGATCAGCAAGCCATCCAGCAGATGCAG
GCGGCGCTCGACCTTGTCCAGGCGGAACTGCAGGCGTCGACGCACGGTGCCGATGCGGAACTGCAGCCACTC
CGAGAGCAACTGGCGCAGGTCCTTGACCTGCGGCTTGCCGTCGAGGCCGATGATGTTCAGGTTGACCCGGTA
GCTGGTTTCCAGGTCGGTGGTGGCGAACAGATGGGTCATCAGCTCTTCGACATCGACCCGGTTCGAACGCGG
GATGATGACGATGCGGGTCGGGTTCTCGTGGTCCGACTCGTCGCGCAGGTCGGCCACCATCGGCAGCTTCTT
GGCCTGCATCTGCCCGGCGATCTGTTCCAGCACCTTGGAACCGGACACCTGGTGCGGCAGGGCGTGGATGAC
GATGTCGCCGTCCTCGACGCGGTACACCGCGCGCATGCGCACCGAACCGCGGCCGGTCTCGTAGACCTTCTG
CAGGTCGGCGCGCGGGGTGATGATCTCGGCTTCGGTGGGGAAGTCCGGGCCCGGCACGTGTTCGCACAATTC
GGCGACCGTCGCGCCCGGCTGGTCGAGCAGGCGCACGCAGGCCGACGCGACTTCCCGCAGGTTGTGCGGCGG
CACGTCGGTGGCCATGCCCACCGCGATGCCGGTGGTGCCGTTGAGCAGCAGGTTGGGCAGGCGGGCCGGCAG
CACGGCCGGCTCGTCGAGGGTGCCGTCGAAGTTCGGTACCCAGTCCACGGTACCCTGGCCCAGTTCGCTGAG
CAGCACCTCGGAATAGCGCGACAGGCGCGCCTCGGTATAACGCATGGCGGCGAAGGACTTGGGATCGTCCGG
CGCCCCCCCAGTTGCCCTGGCCGTCCACCAGCGGATAGCGATAGGAGAACGGCTGCGCCATCAGCACCATGG
CCTCGTAGCAGGCCGAGTCGCCGTGCGGGTGGAACTTGCCGAGCACGTCGCCGACGGTGCGCGCCGACTTCT
TGTGCTTGGAATCGGCATCCAGCCCCAGTTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGTTTCAGGC
CGTCGCCGATATGCGGCAGGGCGCGGTCCATGA
Translation:
MQVLALDHETIAGVGSDHEQRIVVRQQHAFEAGPRRRRQPAAEWLALASRGRQAVGRQRVAAPGGVDEHRIL
VRASRRGGLEAVAGLVGEAGGVDVVALGATHPAFFREHHGHRFGGHQLGFRQRAGLGAGDDRRTAVVAVGLG
VLDQLLAHQLLQLGLAAEQGLQALLLLQQLFLLAADLHLFQACQLAQAGVEDVVGLHLAEFEALHQHRLGLI
LGADDVDHLVEVEEGDQQAIQQMQAALDLVQAELQASTHGADAELQPLREQLAQVLDLRLAVEADDVQVDPV
AGFQVGGGEQMGHQLFDIDPVRTRDDDDAGRVLVVRLVAQVGHHRQLLGLHLPGDLFQHLGTGHLVRQGVDD
DVAVLDAVHRAHAHRTAAGLVDLLQVGARGDDLGFGGEVRARHVFAQFGDRRARLVEQAHAGRRDFPQVVRR
HVGGHAHRDAGGAVEQQVGQAGRQHGRLVEGAVEVRYPVHGTLAQFAEQHLGIARQARLGITHGGEGLGIVR
RPPSCPGRPPADSDRRTAAPSAPWPRSRPSRRAGGTCRARRRRCAPTSCAWNRHPAPVRSWRRRCVAAPVSG
RRRYAAGRGP*
AnnotationID:6814GeneID:6813
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 17:05:40
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16569
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30709
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49815How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5107701Stop: 5109461
Length: 1761
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCAGGTCCTCGCCCTTGACCACGAAACCATAGCCGGCGTCGGAAGCGATCACGAACAGCGCATCGTCGTC
CGGCAGCAGCACGCATTCGAAGCTGGCCCCCGGCGGAGGCGTCAGCCGGCCGCTGAGTGGCTCGCCCTGGCC
TCGCGCGGACGGCAGGCTGTGGGCCGGCAGCGAGTAGCTGCGCCCGGTGGAGTCGATGAACACCGCATACTG
GTTCGAGCGTCCCGGCGCGGCGGCCTTGAAGCCGTCGCCGGCCTTGTAGGAGAGGCCGGCGGCGTCGATGTC
GTGGCCCTTGGCGCAACGCACCCAGCCTTTTTCCGAGAGCACCACGGTCACCGGTTCGGTGGGCATCAGCTC
GGTTTCCGACAGCGCGCGGGCCTCGGCGCGGGCGACGATCGGCGAACGGCGGTCGTCGCCGTAGGTCTCGGC
GTCCTTGATCAGCTCCTCGCGCACCAGCTTCTTCAGCTTGGCCTCGCTGCCGAGCAGGGTCTGCAGGCGCTT
CTGCTCCTTCAGCAACTCTTCCTGCTCGCCGCGGATCTTCATCTCTTCCAGGCGTGCCAACTGGCGCAGGCG
GGTGTCGAGGATGTAGTCGGCCTGCACCTCGCTGAGTTCGAAGCGCTCCATCAGCACCGCCTTGGGCTGATC
CTCGGTGCGGATGATGTGGATCACCTCGTCGAGGTTGAGGAAGGCGATCAGCAAGCCATCCAGCAGATGCAG
GCGGCGCTCGACCTTGTCCAGGCGGAACTGCAGGCGTCGACGCACGGTGCCGATGCGGAACTGCAGCCACTC
CGAGAGCAACTGGCGCAGGTCCTTGACCTGCGGCTTGCCGTCGAGGCCGATGATGTTCAGGTTGACCCGGTA
GCTGGTTTCCAGGTCGGTGGTGGCGAACAGATGGGTCATCAGCTCTTCGACATCGACCCGGTTCGAACGCGG
GATGATGACGATGCGGGTCGGGTTCTCGTGGTCCGACTCGTCGCGCAGGTCGGCCACCATCGGCAGCTTCTT
GGCCTGCATCTGCCCGGCGATCTGTTCCAGCACCTTGGAACCGGACACCTGGTGCGGCAGGGCGTGGATGAC
GATGTCGCCGTCCTCGACGCGGTACACCGCGCGCATGCGCACCGAACCGCGGCCGGTCTCGTAGACCTTCTG
CAGGTCGGCGCGCGGGGTGATGATCTCGGCTTCGGTGGGGAAGTCCGGGCCCGGCACGTGTTCGCACAATTC
GGCGACCGTCGCGCCCGGCTGGTCGAGCAGGCGCACGCAGGCCGACGCGACTTCCCGCAGGTTGTGCGGCGG
CACGTCGGTGGCCATGCCCACCGCGATGCCGGTGGTGCCGTTGAGCAGCAGGTTGGGCAGGCGGGCCGGCAG
CACGGCCGGCTCGTCGAGGGTGCCGTCGAAGTTCGGTACCCAGTCCACGGTACCCTGGCCCAGTTCGCTGAG
CAGCACCTCGGAATAGCGCGACAGGCGCGCCTCGGTATAACGCATGGCGGCGAAGGACTTGGGATCGTCCGG
CGCCCCCCCAGTTGCCCTGGCCGTCCACCAGCGGATAGCGATAGGAGAACGGCTGCGCCATCAGCACCATGG
CCTCGTAGCAGGCCGAGTCGCCGTGCGGGTGGAACTTGCCGAGCACGTCGCCGACGGTGCGCGCCGACTTCT
TGTGCTTGGAATCGGCATCCAGCCCCAGTTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGTTTCAGGC
CGTCGCCGATATGCGGCAGGGCGCGGTCCATGA