ViewGene

Locus Name:
GeneID:
Location:

GeneID:6811
TrivialName: PA14_65550
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65550
PAO1 Ortholog Locus:
Sequence Length:1326
Protein Length:441
Start: 5838955
Stop: 5840280
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGAAGAACGGGCGCCCTGGGCGCCCGTTGCTTTTCCGCTCTACCAACCTGGTTCGTGGCTGCCGGGCCGGC
AAGAGGCGCCCGCCGGCCTCAGGCTCGCCCTTCGCGGTCGCGGTAGCCGAGCAGGTAGAGGATGCCGTCCAG
GCCCAGGGTCGAGATCGCCTGCTTGGCCGACTGCTTGACCAGCGGCTTGGCGCGGAACGCCACGCCCAGGCC
GGCCAGGCCGAGCATCGGCAGGTCGTTGGCGCCGTCGCCGACGGCAATGGTCTGCTCCAGGCTCAGGCCTTC
CTTCGCCGCCAGTTCGCGCAGCAGGTCGGCCTTGCGCTGGGCATCGACGATCGGCTCGACCGCCACCCCGGT
GACCTTGCCGTCGACGATCTGCAACTCGTTGGCGAACACGTAGTCGATCCCCAGCTTCGCCTGCAATTGACG
GGCGAAATAGGTGAAGCCGCCGGACAGGATGGCGGTCTTGTAACCCAGGCGCTTGAGTTCGGCGAACAGGGT
TTCAGCACCCTCGGTCAGACGCAGCGAGGCGCCGATCTCCTCCAGTACGTCTTCCGACAGTCCCTGCAGCAG
CGCCAGGCGCTCCTTGAAGCTGGCGCGGAAGTCCAGTTCACCGCGCATCGCCCGTTCGGTGATCGCGGCGAC
CTTCTCGCCGACGCCGGCGGCCTTGGCCAGTTCGTCGATGACTTCCGCCTCGATCAGCGTCGAATCCATGTC
GAACACCGCCAGCCGGCGATTGCGGCGGAACACGCTGTCCTGCTGGAAAGCGATGTCGACGTTCAATTCCTG
GGCGACGCTGAGGAATTCCGCACGCAGCGCCGCCGGATCGGCCGGTTCGCCGCGTACCGAGAACTCGATGCA
GCCCTTGCCCTGGTCGGCGGGCATGTCCAGCGGCATGCGCCCGGAGAGACGGTCGATGTGGTCGATGTTCAG
CGCGTACTTGGCGGTGATCGAGCTGACCCTCTGCAGTTGCTCGGCAGTCACCCGGCGGGTGAGCAGGGTCAC
GATGTGCCGCGCCTTGCCCTGGCCGTCGACCCATTGCCGGTAGTCCTCTTCCGAGACCGGGGTGAAGCGCAC
CTGCTGGTCCAGCTTGTAGGCGGTGAACAGCACGTCCTTGAGGACCGAGGAACCGGCTTCGGTATCCGGGAT
TTCCACCAGGATGCCGAACGACAGGGTGTCGTGGATCACCGCCTGGCCGATGTCGAGGATGTTCACCCCGCC
CTGGGCCAGTACGCCGGTGATGGCCGCGGTGAGACCGGGGCGGTCTTCCCCGGTGATGTTGATCAGGACAAT
TTCGCGCAAGGCGTAAGCTCCGCCAGGTAA
Translation:
MKNGRPGRPLLFRSTNLVRGCRAGKRRPPASGSPFAVAVAEQVEDAVQAQGRDRLLGRLLDQRLGAERHAQA
GQAEHRQVVGAVADGNGLLQAQAFLRRQFAQQVGLALGIDDRLDRHPGDLAVDDLQLVGEHVVDPQLRLQLT
GEIGEAAGQDGGLVTQALEFGEQGFSTLGQTQRGADLLQYVFRQSLQQRQALLEAGAEVQFTAHRPFGDRGD
LLADAGGLGQFVDDFRLDQRRIHVEHRQPAIAAEHAVLLESDVDVQFLGDAEEFRTQRRRIGRFAAYRELDA
ALALVGGHVQRHAPGETVDVVDVQRVLGGDRADPLQLLGSHPAGEQGHDVPRLALAVDPLPVVLFRDRGEAH
LLVQLVGGEQHVLEDRGTGFGIRDFHQDAERQGVVDHRLADVEDVHPALGQYAGDGRGETGAVFPGDVDQDN
FAQGVSSAR*
AnnotationID:6812GeneID:6811
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 17:05:49
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13343
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30705
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49813How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5102636Stop: 5103961
Length: 1326
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGAAGAACGGGCGCCCTGGGCGCCCGTTGCTTTTCCGCTCTACCAACCTGGTTCGTGGCTGCCGGGCCGGC
AAGAGGCGCCCGCCGGCCTCAGGCTCGCCCTTCGCGGTCGCGGTAGCCGAGCAGGTAGAGGATGCCGTCCAG
GCCCAGGGTCGAGATCGCCTGCTTGGCCGACTGCTTGACCAGCGGCTTGGCGCGGAACGCCACGCCCAGGCC
GGCCAGGCCGAGCATCGGCAGGTCGTTGGCGCCGTCGCCGACGGCAATGGTCTGCTCCAGGCTCAGGCCTTC
CTTCGCCGCCAGTTCGCGCAGCAGGTCGGCCTTGCGCTGGGCATCGACGATCGGCTCGACCGCCACCCCGGT
GACCTTGCCGTCGACGATCTGCAACTCGTTGGCGAACACGTAGTCGATCCCCAGCTTCGCCTGCAATTGACG
GGCGAAATAGGTGAAGCCGCCGGACAGGATGGCGGTCTTGTAACCCAGGCGCTTGAGTTCGGCGAACAGGGT
TTCAGCACCCTCGGTCAGACGCAGCGAGGCGCCGATCTCCTCCAGTACGTCTTCCGACAGTCCCTGCAGCAG
CGCCAGGCGCTCCTTGAAGCTGGCGCGGAAGTCCAGTTCACCGCGCATCGCCCGTTCGGTGATCGCGGCGAC
CTTCTCGCCGACGCCGGCGGCCTTGGCCAGTTCGTCGATGACTTCCGCCTCGATCAGCGTCGAATCCATGTC
GAACACCGCCAGCCGGCGATTGCGGCGGAACACGCTGTCCTGCTGGAAAGCGATGTCGACGTTCAATTCCTG
GGCGACGCTGAGGAATTCCGCACGCAGCGCCGCCGGATCGGCCGGTTCGCCGCGTACCGAGAACTCGATGCA
GCCCTTGCCCTGGTCGGCGGGCATGTCCAGCGGCATGCGCCCGGAGAGACGGTCGATGTGGTCGATGTTCAG
CGCGTACTTGGCGGTGATCGAGCTGACCCTCTGCAGTTGCTCGGCAGTCACCCGGCGGGTGAGCAGGGTCAC
GATGTGCCGCGCCTTGCCCTGGCCGTCGACCCATTGCCGGTAGTCCTCTTCCGAGACCGGGGTGAAGCGCAC
CTGCTGGTCCAGCTTGTAGGCGGTGAACAGCACGTCCTTGAGGACCGAGGAACCGGCTTCGGTATCCGGGAT
TTCCACCAGGATGCCGAACGACAGGGTGTCGTGGATCACCGCCTGGCCGATGTCGAGGATGTTCACCCCGCC
CTGGGCCAGTACGCCGGTGATGGCCGCGGTGAGACCGGGGCGGTCTTCCCCGGTGATGTTGATCAGGACAAT
TTCGCGCAAGGCGTAAGCTCCGCCAGGTAA