ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6809

TrivialName: PA14_65510

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_65510

PAO1 Ortholog Locus:

Sequence Length: 2076

Protein Length: 691

Start: 5836905

Stop: 5834830

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC16114.1| (AF010496) methyl-accepting chemoreceptor [Rhodobacter capsulatus] Identities = 106/443 (23%), Positives = 156/443 (35%), Gaps = 90/443 (20%)

Sequence:

ATGGTTTTCTTTTCGATGGCCATGGAAAGGGCTCAGTCCGCGTCCGGGCGGGCGCGAAAAGACGGCGAATGG
AGGTGTCGGGGCAATCTACAGAGACTTCCAGAGCGAGTCAAAATCTTCCTCCCCCGCAGGCGGCCGGGCCAC
TGGCGCTGTGACCGGCTTATCGCTCGGGGTGTTCACCGGTTCCGCCGAGCGGTATTCGAACTGGCTGAAGCT
GCCGGTCGAGGCCTGCCGGCGATTCAGCACCGCGCGCCGCTCCTCGCCGTGCAGGTTGATCTGCACCCGGCT
GCCCTCCTGGAACGGCAGGCGCGGGGTGATCACCGTCGCCGGCCGCGAGATCGCGGCGATTTCCGGCAGCAG
CAGGGCGCGCAGGTAGTGGCTGCTCTGCTCGGTCTTGCGCAGCAGTTGCAGGCCGCAGGGCTGCGCCGCCGG
GGCGATCATCTCGATGCCCATCTGCGTGCCGCCATTGCGCACCTGGCGGATCCAGCGCACCACCGCGATGCT
CCACGCCTGGCCGGGAAGGTCCTGCAGACCGACCAGTTCGCCCGCCTGCAGTTGGGCGGGCACCTCCTTCGG
CCAGCTCAGGCAATAACCGCCGGGGCTGTGGTTGACGATGGGCAGGGCGTAGGTCGGATAGTCCTCGGTGGC
GTCAGTCTGTGCGTGGGCCTGCGGGTGATCGGGCTGCCCACCGCGGGACGACTGGTGCGGGCGGTACTCGAT
TTCCTCCAGCGGCATGCCGGGCTGCCAGTCGGTGACCTTCTGCGCATCGAAGGCGCCGGCCCAGGCGTCCTG
GACGTCGGCCTTGAAGCGAGGCGCCTCGGGCGCTTCCTGGATCTGCAGGACCTCGTTGAACGGGCGGCGCCC
GGCGAGGAAGTAGTGCAGGGCGCTCATGCCGATGCACAGGGTCAACTGGCCCTGGCCCTGGGTGCGCTGGAA
GGTACGTTCGGCGATGTCTCCCCAGGCCGAGGAGAGATGTTGCAGCAGGTCCAGGGTCACCCCTTCGATCAG
CGGCAGGCGCGCCTTCGCGCGCTCGGCCTCGGGCTGCAGCAGGTATTCGCGGATCAGTTCGACCAGCGGCTG
GGTGTCGATGCCCAGGGCATTGGCCAGTTGGGTCTCCGGGTACAGCGAGCGGTAGCGCGGCGGGCCGTCGAT
CTGCGGCACGGCGATGAACAGCGAGCCGGGCAGCGCCGCGCTCTGTATCGACAGCAATTGGCTCCAGGGTTC
GAGCACCTCGGCGAGCCGTGCAATGTTGTTCTGGCGCATCTGGTTGCAGCGCGCGCAGCCGAGCAGCAGCGG
TATCAGGTAGGCCTGCTCGACGCTCAGGCCGGGGGTGTGCTTGGCCAGTTCGTCGCGCACCGCGAGACGATG
CACGCCGCGCTGGCTGGCCAACTGGTAGAGCTGGTGGAGTTCCAGCCAAAGCCCCTCGGGGACCGGGCAGTA
CAACTGGCTGGCACGGATCAGCGGGCCGCACAGGCTGCGGATCGCCCGCTGGATGCCGACCGCGAGCAACTG
CGCGCGGTCGCGGCTGTTGCGCGGCGCTTCCTGGACCACGATCAGCTTGTAGCCGATGGCCAGGTGGTTCTG
CAGGGCCTGGCAGAGGTTGGCGATCTTGCGCGGCCGTTCGTCGAGGACGATGGCCTGGTTGAGGAAGTGCCG
TTCCAGGTGGGTGCAGACGAAATGCACCTCTGGACGGAACAGTTCGAGCAGTTGCAGGCGGGCCTCGACGGG
CAGCACCAACTGGTTGAGTTCGATCAGGCCCTGGTAGAGCTGGCGCGCGGTTTCCCCGAGGTTGGCCTTGGG
CAGGTGCGCCAGCCAGTACTTGATGTCCTTCGGGGTGGCGTCGCAGAAGCTCAGGTTCTGCTGCGTCGGAGT
GGGGACGCGCAACGAGAGGTGGGGGCTCTGGTTTTCCATGGGGGGTTAGACGGCTCCGCTACTGAAAAGGCT
CTACGGGGGGTTGAAGCCCCGGAGAGGTGCCGGACTTCCGATCGCCGCGGCTGCGCCTCCTCTTTCTTAACA
CGGGAGGCGGGTTCATCGTCGTGGCCAGGACAGGAACTGTGCGGCAGTCCGCTTTCCTGA

Translation:

MVFFSMAMERAQSASGRARKDGEWRCRGNLQRLPERVKIFLPRRRPGHWRCDRLIARGVHRFRRAVFELAEA
AGRGLPAIQHRAPLLAVQVDLHPAALLERQARGDHRRRPRDRGDFRQQQGAQVVAALLGLAQQLQAAGLRRR
GDHLDAHLRAAIAHLADPAHHRDAPRLAGKVLQTDQFARLQLGGHLLRPAQAITAGAVVDDGQGVGRIVLGG
VSLCVGLRVIGLPTAGRLVRAVLDFLQRHAGLPVGDLLRIEGAGPGVLDVGLEARRLGRFLDLQDLVERAAP
GEEVVQGAHADAQGQLALALGALEGTFGDVSPGRGEMLQQVQGHPFDQRQARLRALGLGLQQVFADQFDQRL
GVDAQGIGQLGLRVQRAVARRAVDLRHGDEQRAGQRRALYRQQLAPGFEHLGEPCNVVLAHLVAARAAEQQR
YQVGLLDAQAGGVLGQFVAHRETMHAALAGQLVELVEFQPKPLGDRAVQLAGTDQRAAQAADRPLDADREQL
RAVAAVARRFLDHDQLVADGQVVLQGLAEVGDLARPFVEDDGLVEEVPFQVGADEMHLWTEQFEQLQAGLDG
QHQLVEFDQALVELARGFPEVGLGQVRQPVLDVLRGGVAEAQVLLRRSGDAQREVGALVFHGGLDGSATEKA
LRGVEAPERCRTSDRRGCASSFLTREAGSSSWPGQELCGSPLS*

AnnotationID:6810 GeneID:6809

AnnotatorUID: diggins

Modification Date/Time: 2005-03-13 17:05:27

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13340

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30701