ViewGene
Locus Name:
GeneID:
Location:

GeneID:6806
TrivialName: PA14_65440
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65440
PAO1 Ortholog Locus:
Sequence Length:891
Protein Length:296
Start: 5830369
Stop: 5831259
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGATCGGCTGGTTATTGTCCATCTATCGACAGTGCCTCCACTCAGCGGCCACGCACGGCCTGCTCGAGCTC
GGCGAAGGTCGGCCGATGGGCGGGCAGCAGCACCTTGCGGCCGAACTCGACGGCCAGCGAAGGCGGCATGCC
GGAAGCAGAAGCGACCAGGCAGGCCTTGATCGCTTCGAACATGTTCAACTCTTCCTTGGCATCGTGCTCCAG
CGCGACGGCCAGCGGGCCGACGAAGCCGTAGGCGGCGAGAATCCCGAGGAAGGTACCCACCAGGGCGGCGGC
GACGTGGTGGCCGATCTCCGCCTGGCTGCCTTCGCCAAGCAACGCCATGGTGATGACGATGCCGAGTACCGC
GGCGACGATACCGAAGCCCGGCAGGGCGTCGGCGACCTTGGTCACCGCGTGGGACGGATGCTCCAGGTCCTC
CTTGAGACTGGACAGCTCCATGTCGAACAGGCCTTCCAGCTCGTGCGGCGCCATGTTGCCGGAGGACATGAT
GCGCAGGTAGTCGCAGACATAGGCGGTCATCCGTTCGTCCTTCAGCACGCCGGGGTACTTGCTGAAGATGGG
ACTGGCCGCGGGGTCCTCGATGTCCGCCTCGATCGCCATCATCCCTTCGCGCCGGCTCTTGTTGAGGATCTC
GTAGAGCATGCCCAGCACCTCGAGGTAGTAGGTCTGGGTAAAGCGGTTGCTGAACATCTTCGGCGCTTTCTT
CAGCACCACCATGAACGTGCTGCCCGGGTTGGCCTGGAGGAACGCCCCCAGTGCCGCACCGCCGATGATCAG
GACCTCGAAGGGCTGGATGATGGCGCCGATCTTGCCGCCGGAGAGCAGGAAGCCCCCGAGGACACTGGCGAA
AACGACGATGATGCCGATGATTTTTGA
Translation:
MIGWLLSIYRQCLHSAATHGLLELGEGRPMGGQQHLAAELDGQRRRHAGSRSDQAGLDRFEHVQLFLGIVLQ
RDGQRADEAVGGENPEEGTHQGGGDVVADLRLAAFAKQRHGDDDAEYRGDDTEARQGVGDLGHRVGRMLQVL
LETGQLHVEQAFQLVRRHVAGGHDAQVVADIGGHPFVLQHAGVLAEDGTGRGVLDVRLDRHHPFAPALVEDL
VEHAQHLEVVGLGKAVAEHLRRFLQHHHERAARVGLEERPQCRTADDQDLEGLDDGADLAAGEQEAPEDTGE
NDDDADDF*
AnnotationID:6807GeneID:6806
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 15:03:12
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13334




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30695




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49808How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5094050Stop: 5094940

          
Length: 891


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGATCGGCTGGTTATTGTCCATCTATCGACAGTGCCTCCACTCAGCGGCCACGCACGGCCTGCTCGAGCTC 
GGCGAAGGTCGGCCGATGGGCGGGCAGCAGCACCTTGCGGCCGAACTCGACGGCCAGCGAAGGCGGCATGCC 
GGAAGCAGAAGCGACCAGGCAGGCCTTGATCGCTTCGAACATGTTCAACTCTTCCTTGGCATCGTGCTCCAG 
CGCGACGGCCAGCGGGCCGACGAAGCCGTAGGCGGCGAGAATCCCGAGGAAGGTACCCACCAGGGCGGCGGC 
GACGTGGTGGCCGATCTCCGCCTGGCTGCCTTCGCCAAGCAACGCCATGGTGATGACGATGCCGAGTACCGC 
GGCGACGATACCGAAGCCCGGCAGGGCGTCGGCGACCTTGGTCACCGCGTGGGACGGATGCTCCAGGTCCTC 
CTTGAGACTGGACAGCTCCATGTCGAACAGGCCTTCCAGCTCGTGCGGCGCCATGTTGCCGGAGGACATGAT 
GCGCAGGTAGTCGCAGACATAGGCGGTCATCCGTTCGTCCTTCAGCACGCCGGGGTACTTGCTGAAGATGGG 
ACTGGCCGCGGGGTCCTCGATGTCCGCCTCGATCGCCATCATCCCTTCGCGCCGGCTCTTGTTGAGGATCTC 
GTAGAGCATGCCCAGCACCTCGAGGTAGTAGGTCTGGGTAAAGCGGTTGCTGAACATCTTCGGCGCTTTCTT 
CAGCACCACCATGAACGTGCTGCCCGGGTTGGCCTGGAGGAACGCCCCCAGTGCCGCACCGCCGATGATCAG 
GACCTCGAAGGGCTGGATGATGGCGCCGATCTTGCCGCCGGAGAGCAGGAAGCCCCCGAGGACACTGGCGAA 
AACGACGATGATGCCGATGATTTTTGA