ViewGene

Locus Name:
GeneID:
Location:

GeneID:6805
TrivialName: PA14_65360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65360
PAO1 Ortholog Locus:
Sequence Length:1626
Protein Length:541
Start: 5823059
Stop: 5824684
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 98/321 (30%), Positives = 125/321 (38%), Gaps = 70/321 (21%)
Sequence:
GTGTTTCACTCATCACTGGGCCGCCAGGGCGGTGCTCGGGATGGACAGGGCCTGGCCGACTTTCAGGTTGTC
GCTGGGCAGGCTGTTGCTGCTGCGCAGCGCGGCCATGCTCACTTCATAGCGCTGGGCGATCATCGCCAGGGT
CTCTCCGGGCCGCACCACGTGCTCGCGCGGCCCCATGGAGAGCTTGCCCTGGGCGCGCAAAGAGGCGATGTA
GGTGCCGGGCGGCGGGCTCTGCTGGAAATACTGGCGGATGCCGCTGGTGATCGAACGCGCCAAGGCCTGCTG
ATGGCTGGCGCTGGCCAGCTTGCGCGACTCGTTGACGTTCGAGATGAAGCCGGTTTCCACCAGGATCGACGG
GATGTCCGGCGACTTCAACACCATGAACCCGGCCTGCTCGACACGACGCTTGTGCAGCGAAGTGATGCGGCC
GACATTGGTCAGCACCTTGTGGCCGACGTCCAGGCTCGACGAGAGGGTGGCGGTCATCGACAGGTCGAGCAG
CACGCCGGCGAGCATCTGGTCCTTGTCGCCGAGGCTGACGCTGCCATCGCCGCCGATCAGGTCGGAACGGTT
CTCGCTGTCGGCCAGCCAGCGCGCGGTTTCCGAAGTGGCGCCGCGGTCGGACAGGGCGAACACCGAGGCACC
GAAGGCGCTGCGGCTCGGCGCGGCGTCGGCATGGATCGAGACGAACAGGTCGGCGCCCTTCTTGCGGGCGAT
CTCGGTGCGCTTGCGCAGTGGGATGAAGTAGTCGCCGGTACGGGTCAGCTCGGCCCGGTAACCGCGCACCTG
GTTGATCTGGCGTTGCAGCTCGCGAGCGATCGACAGGGTGATGTTCTTCTCGTGCAGCCCGCCCGGGCCAAG
GGCGCCAGGGTCTTCACCGCCGTGGCCGGCGTCGATGGCGATGACGATATCGCGGGTACCGCCCTtGGTCGG
CAGCGGCAGCTTGGCCACCGGCTGGGTCGGCGTCACCGGAGTGACCGGCACGCTCGGGGTCGGCGTCGCGGG
TACGTCCGGGGTCAGGTCGGCGCCCTGGTCGTAGAGATCGACCACCAGGCGGTTGCCGTATTGCTGGTTGGG
CGGCAGGACGAAGCTTTTCGGGGTGACCTGCGCCGACAGGTCGAGGACCATGCGCAGGTCGTTGGGCGTGCG
CTGGGCGGAGCGCACCGCGGTGATCGGGGTGTTGCCGAGCTTGAGACCGTTGAGCTGGGTCGCCAGCTGGGC
GCCGCTGACGTCGATGACGATACGGTTGGGTGCGGCCAGGGTGAACAGGCTGTGCTGCACCGGACCGGAGAG
ATCGAAGACCAGACGGGTGTTGTCCGGAGCGCGCCAGATCCGCACGCTCTTGATTTGCGCGGCGGCCAGAAC
CTCGCCGACCTGGCAGGCCAGCAGAATCATCACCCCAGTCAACAACGTCCGCAGACGCAAGCCCCAACCCAT
CGTTTTTCTCATGCTCCCATGGTCAGGGTGGCACACCAGGCTTCGCCCCGCGCACCGTGCGGTACCAGGCGC
AGTGTCCGTCCACCCGCTTGGGCAGTAATGGTAATGTCCAGATCGGCGGTTGGCAAAACGCCCGCACCGCGC
TCGGGCCACTCGATCAGACAGAGTGCGCTGCCATCGAAATAG
Translation:
MFHSSLGRQGGARDGQGLADFQVVAGQAVAAAQRGHAHFIALGDHRQGLSGPHHVLARPHGELALGAQRGDV
GAGRRALLEILADAAGDRTRQGLLMAGAGQLARLVDVRDEAGFHQDRRDVRRLQHHEPGLLDTTLVQRSDAA
DIGQHLVADVQARREGGGHRQVEQHAGEHLVLVAEADAAIAADQVGTVLAVGQPARGFRSGAAVGQGEHRGT
EGAAARRGVGMDRDEQVGALLAGDLGALAQWDEVVAGTGQLGPVTAHLVDLALQLASDRQGDVLLVQPARAK
GARVFTAVAGVDGDDDIAGTALGRQRQLGHRLGRRHRSDRHARGRRRGYVRGQVGALVVEIDHQAVAVLLVG
RQDEAFRGDLRRQVEDHAQVVGRALGGAHRGDRGVAELETVELGRQLGAADVDDDTVGCGQGEQAVLHRTGE
IEDQTGVVRSAPDPHALDLRGGQNLADLAGQQNHHPSQQRPQTQAPTHRFSHAPMVRVAHQASPRAPCGTRR
SVRPPAWAVMVMSRSAVGKTPAPRSGHSIRQSALPSK*
AnnotationID:6806GeneID:6805
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 14:02:56
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16564
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30693
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49807How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5086740Stop: 5088365
Length: 1626
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGTTTCACTCATCACTGGGCCGCCAGGGCGGTGCTCGGGATGGACAGGGCCTGGCCGACTTTCAGGTTGTC
GCTGGGCAGGCTGTTGCTGCTGCGCAGCGCGGCCATGCTCACTTCATAGCGCTGGGCGATCATCGCCAGGGT
CTCTCCGGGCCGCACCACGTGCTCGCGCGGCCCCATGGAGAGCTTGCCCTGGGCGCGCAAAGAGGCGATGTA
GGTGCCGGGCGGCGGGCTCTGCTGGAAATACTGGCGGATGCCGCTGGTGATCGAACGCGCCAAGGCCTGCTG
ATGGCTGGCGCTGGCCAGCTTGCGCGACTCGTTGACGTTCGAGATGAAGCCGGTTTCCACCAGGATCGACGG
GATGTCCGGCGACTTCAACACCATGAACCCGGCCTGCTCGACACGACGCTTGTGCAGCGAAGTGATGCGGCC
GACATTGGTCAGCACCTTGTGGCCGACGTCCAGGCTCGACGAGAGGGTGGCGGTCATCGACAGGTCGAGCAG
CACGCCGGCGAGCATCTGGTCCTTGTCGCCGAGGCTGACGCTGCCATCGCCGCCGATCAGGTCGGAACGGTT
CTCGCTGTCGGCCAGCCAGCGCGCGGTTTCCGAAGTGGCGCCGCGGTCGGACAGGGCGAACACCGAGGCACC
GAAGGCGCTGCGGCTCGGCGCGGCGTCGGCATGGATCGAGACGAACAGGTCGGCGCCCTTCTTGCGGGCGAT
CTCGGTGCGCTTGCGCAGTGGGATGAAGTAGTCGCCGGTACGGGTCAGCTCGGCCCGGTAACCGCGCACCTG
GTTGATCTGGCGTTGCAGCTCGCGAGCGATCGACAGGGTGATGTTCTTCTCGTGCAGCCCGCCCGGGCCAAG
GGCGCCAGGGTCTTCACCGCCGTGGCCGGCGTCGATGGCGATGACGATATCGCGGGTACCGCCCTtGGTCGG
CAGCGGCAGCTTGGCCACCGGCTGGGTCGGCGTCACCGGAGTGACCGGCACGCTCGGGGTCGGCGTCGCGGG
TACGTCCGGGGTCAGGTCGGCGCCCTGGTCGTAGAGATCGACCACCAGGCGGTTGCCGTATTGCTGGTTGGG
CGGCAGGACGAAGCTTTTCGGGGTGACCTGCGCCGACAGGTCGAGGACCATGCGCAGGTCGTTGGGCGTGCG
CTGGGCGGAGCGCACCGCGGTGATCGGGGTGTTGCCGAGCTTGAGACCGTTGAGCTGGGTCGCCAGCTGGGC
GCCGCTGACGTCGATGACGATACGGTTGGGTGCGGCCAGGGTGAACAGGCTGTGCTGCACCGGACCGGAGAG
ATCGAAGACCAGACGGGTGTTGTCCGGAGCGCGCCAGATCCGCACGCTCTTGATTTGCGCGGCGGCCAGAAC
CTCGCCGACCTGGCAGGCCAGCAGAATCATCACCCCAGTCAACAACGTCCGCAGACGCAAGCCCCAACCCAT
CGTTTTTCTCATGCTCCCATGGTCAGGGTGGCACACCAGGCTTCGCCCCGCGCACCGTGCGGTACCAGGCGC
AGTGTCCGTCCACCCGCTTGGGCAGTAATGGTAATGTCCAGATCGGCGGTTGGCAAAACGCCCGCACCGCGC
TCGGGCCACTCGATCAGACAGAGTGCGCTGCCATCGAAATAG