ViewGene
Locus Name:
GeneID:
Location:

GeneID:6799
TrivialName: PA14_65140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65140
PAO1 Ortholog Locus:
Sequence Length:495
Protein Length:164
Start: 5807031
Stop: 5807525
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN83714.1|AE016771_225 (AE016771) Hypothetical protein [Escherichia coli CFT073]
Identities = 46/150 (30%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Sequence:
ATGCCCGCCCAGCCCTACCGATCGGATCGCTTACTCAGCGACGATGATCAGCTTCAGAGTGGTTTCCACGTC
GGTGTGCAGGTGCACGGCGACGTCGAACTCACCGGTGTTGCGCAGCGCGCCGTTGGGCAGGCGAACTTCGGC
TTTTTCCAGCGGGTAACCGGCAGCGGAAACGGCTTCGGCGATGTCGCGGGTGCCGATCGAACCGAACAGCTT
GCCTTCGTCGCCAGCGTGGGCGCCGAGGGTTACCACCAGCTCGGAGAGCTGGGCAGCACGGGCTTCGGCAGC
GGCCTTCTTCTCGGCGGCAGCCTTTTCCAGCTCGGCGCGGCGGGCTTCGAACGCAGCGACGTTCTCGGCGGT
GGCGACGGTGGCCTTGCCCTGCGGCAGCAGGAAGTTACGGGCGTAACCGCCCTTGATGTTCACCTTGTCGCC
CAGGTTGCCCAGGTTGGCGACTTTTTCCAGCAGGATGACTTCCATTTGAGTCTTACCTCTTAA
Translation:
MPAQPYRSDRLLSDDDQLQSGFHVGVQVHGDVELTGVAQRAVGQANFGFFQRVTGSGNGFGDVAGADRTEQL
AFVASVGAEGYHQLGELGSTGFGSGLLLGGSLFQLGAAGFERSDVLGGGDGGLALRQQEVTGVTALDVHLVA
QVAQVGDFFQQDDFHLSLTS*
AnnotationID:6800GeneID:6799
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 12:12:55
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13322




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30681




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49801How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5070712Stop: 5071206

          
Length: 495


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCCCGCCCAGCCCTACCGATCGGATCGCTTACTCAGCGACGATGATCAGCTTCAGAGTGGTTTCCACGTC 
GGTGTGCAGGTGCACGGCGACGTCGAACTCACCGGTGTTGCGCAGCGCGCCGTTGGGCAGGCGAACTTCGGC 
TTTTTCCAGCGGGTAACCGGCAGCGGAAACGGCTTCGGCGATGTCGCGGGTGCCGATCGAACCGAACAGCTT 
GCCTTCGTCGCCAGCGTGGGCGCCGAGGGTTACCACCAGCTCGGAGAGCTGGGCAGCACGGGCTTCGGCAGC 
GGCCTTCTTCTCGGCGGCAGCCTTTTCCAGCTCGGCGCGGCGGGCTTCGAACGCAGCGACGTTCTCGGCGGT 
GGCGACGGTGGCCTTGCCCTGCGGCAGCAGGAAGTTACGGGCGTAACCGCCCTTGATGTTCACCTTGTCGCC 
CAGGTTGCCCAGGTTGGCGACTTTTTCCAGCAGGATGACTTCCATTTGAGTCTTACCTCTTAA