ViewGene

Locus Name:
GeneID:
Location:

GeneID:6798
TrivialName: PA14_65120
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_65120
PAO1 Ortholog Locus:
Sequence Length:1689
Protein Length:562
Start: 5805502
Stop: 5807190
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGTAAGGCGCCCGCCGGGCAAGACCCAAGCCGGGTCATTCGTCCTCGAAGTTGTACATGCCGGCGGCAAG
GTTCTCGAAGCGCGTGTATTTGCCGATGAAGGCCAGGCGCACCGTGCCGATCGGACCGTTACGCTGCTTGCC
GATGATGATTTCGGCGACGCCCTTGAACTCGGTCTCCGGGTGGTACACCTCGTCGCGGTAGACGAACATGAT
CACGTCGGCGTCCTGCTCGATCGCCCCGGATTCGCGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGTCGCTG
CTCCAGGGAGCGGTTGAGCTGCGACAGGGCGATCACCGGGCAGTTGAATTCCTTCGCCAGGGCCTTCAGCGA
GCGGGAGATCTCGGAAATCTCGTTGGTCCGGTTGTCGCCGCTGGAGCCGGGTATCTGCATCAGCTGCAGGTA
GTCGATCATGATCAGCGCCAGGTCGCCGTGCTCGCGCACCAGGCGACGGGTCCGCGCACGCATTTCCGAGGG
GCTGATGCCGGCGGTGTCGTCGATGAACAGCTTCTTGTCGTTGAGCAGGTTGATCGCCGAGGTCAGGCGCGG
CCAATCCTCGTCGTCGAGCTTGCCGGAACGGACCTTGGTCTGATCGATGCGACCGAGCGACGAGAGCATACG
CATCACGATCGAGTCGGAGGGCATCTCCAGGGAGTACACCAACACGGCCTTGTCGGTGCGCATCACCGCATT
CTCGACCAGGTTCATGGCGAAGGTGGTCTTACCCATCGACGGACGCCCGGCGACGATGATCAGGTCGGCCGG
CTGCAGGCCGCTGGTCTTCTCGTCGAGGTCGGTGAAACCGGTGGACACCCCGGTCAGCGCCTCGCTGGTGTT
GAACAGGTAGTCGATGCGGTCGATGGTCTTGACCAGGATATCGCTGATCCCCACCGGCCCGCCGGTCTTCGG
TCGCGCTTCGGCGATCTCGAAGATCTTCCGCTCGGCCTCGTCGAGGATCTCGTTGGCGCCGCGCCCTTCCGG
GTGGAAGGCGCTGTCGGCGATCTCGTTGCTGATGCCGATCAGTTGGCGCAGGGTGGCGCGCTCGCGGATGAT
CTGCGCGTAGGCCTTGATGTTGGCGACCGACGGAATGTTCTTCGCCAGTTCGCCGAGATAGGCCAGGCCGCC
GACCTGGGCCAGTTGTCCTTCCTTCTCCAACTGCTCGGAGAGGGTCACCACGTCGATCGGCTGGTTGGCCTC
GGCCAGCTTGTAGATGGCGCGGAAGATCAGGCGATGGTCATGGCGGTAGAAATCGCCGTCGGACACCGAGTC
CGACACCCGCTCCCAGGCGTTGTTGTCCAGCATCAGGCCTCCCAGCACGGCCTGCTCGGCCTCGATCGAGTG
CGGCGGCACCTTCAGGGCTGTGGTTTCCAGGTCGTATTGCTCGGGGCTGGTGATCTCGTTCATAGACTCGAC
GCAAGAAAAAGGAACAGCGGAAAAAACAACGGGCACGGTGCCGTTGCCGGTACCGTGCCCGATGTTAGCGGA
CTGCCGCGGACACGCATATGCCCGCCCAGCCCTACCGATCGGATCGCTTACTCAGCGACGATGATCAGCTTC
AGAGTGGTTTCCACGTCGGTGTGCAGGTGCACGGCGACGTCGAACTCACCGGTGTTGCGCAGCGCGCCGTTG
GGCAGGCGAACTTCGGCTTTTTCCAGCGGGTAA
Translation:
MVRRPPGKTQAGSFVLEVVHAGGKVLEARVFADEGQAHRADRTVTLLADDDFGDALELGLRVVHLVAVDEHD
HVGVLLDRPGFAQVGVHRALVGSLLQGAVELRQGDHRAVEFLRQGLQRAGDLGNLVGPVVAAGAGYLHQLQV
VDHDQRQVAVLAHQATGPRTHFRGADAGGVVDEQLLVVEQVDRRGQARPILVVELAGTDLGLIDATERREHT
HHDRVGGHLQGVHQHGLVGAHHRILDQVHGEGGLTHRRTPGDDDQVGRLQAAGLLVEVGETGGHPGQRLAGV
EQVVDAVDGLDQDIADPHRPAGLRSRFGDLEDLPLGLVEDLVGAAPFRVEGAVGDLVADADQLAQGGALADD
LRVGLDVGDRRNVLRQFAEIGQAADLGQLSFLLQLLGEGHHVDRLVGLGQLVDGAEDQAMVMAVEIAVGHRV
RHPLPGVVVQHQASQHGLLGLDRVRRHLQGCGFQVVLLGAGDLVHRLDARKRNSGKNNGHGAVAGTVPDVSG
LPRTRICPPSPTDRIAYSATMISFRVVSTSVCRCTATSNSPVLRSAPLGRRTSAFSSG*
AnnotationID:6799GeneID:6798
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 12:12:23
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13320
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30679
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49800How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 5069183Stop: 5070871
Length: 1689
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGTAAGGCGCCCGCCGGGCAAGACCCAAGCCGGGTCATTCGTCCTCGAAGTTGTACATGCCGGCGGCAAG
GTTCTCGAAGCGCGTGTATTTGCCGATGAAGGCCAGGCGCACCGTGCCGATCGGACCGTTACGCTGCTTGCC
GATGATGATTTCGGCGACGCCCTTGAACTCGGTCTCCGGGTGGTACACCTCGTCGCGGTAGACGAACATGAT
CACGTCGGCGTCCTGCTCGATCGCCCCGGATTCGCGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGTCGCTG
CTCCAGGGAGCGGTTGAGCTGCGACAGGGCGATCACCGGGCAGTTGAATTCCTTCGCCAGGGCCTTCAGCGA
GCGGGAGATCTCGGAAATCTCGTTGGTCCGGTTGTCGCCGCTGGAGCCGGGTATCTGCATCAGCTGCAGGTA
GTCGATCATGATCAGCGCCAGGTCGCCGTGCTCGCGCACCAGGCGACGGGTCCGCGCACGCATTTCCGAGGG
GCTGATGCCGGCGGTGTCGTCGATGAACAGCTTCTTGTCGTTGAGCAGGTTGATCGCCGAGGTCAGGCGCGG
CCAATCCTCGTCGTCGAGCTTGCCGGAACGGACCTTGGTCTGATCGATGCGACCGAGCGACGAGAGCATACG
CATCACGATCGAGTCGGAGGGCATCTCCAGGGAGTACACCAACACGGCCTTGTCGGTGCGCATCACCGCATT
CTCGACCAGGTTCATGGCGAAGGTGGTCTTACCCATCGACGGACGCCCGGCGACGATGATCAGGTCGGCCGG
CTGCAGGCCGCTGGTCTTCTCGTCGAGGTCGGTGAAACCGGTGGACACCCCGGTCAGCGCCTCGCTGGTGTT
GAACAGGTAGTCGATGCGGTCGATGGTCTTGACCAGGATATCGCTGATCCCCACCGGCCCGCCGGTCTTCGG
TCGCGCTTCGGCGATCTCGAAGATCTTCCGCTCGGCCTCGTCGAGGATCTCGTTGGCGCCGCGCCCTTCCGG
GTGGAAGGCGCTGTCGGCGATCTCGTTGCTGATGCCGATCAGTTGGCGCAGGGTGGCGCGCTCGCGGATGAT
CTGCGCGTAGGCCTTGATGTTGGCGACCGACGGAATGTTCTTCGCCAGTTCGCCGAGATAGGCCAGGCCGCC
GACCTGGGCCAGTTGTCCTTCCTTCTCCAACTGCTCGGAGAGGGTCACCACGTCGATCGGCTGGTTGGCCTC
GGCCAGCTTGTAGATGGCGCGGAAGATCAGGCGATGGTCATGGCGGTAGAAATCGCCGTCGGACACCGAGTC
CGACACCCGCTCCCAGGCGTTGTTGTCCAGCATCAGGCCTCCCAGCACGGCCTGCTCGGCCTCGATCGAGTG
CGGCGGCACCTTCAGGGCTGTGGTTTCCAGGTCGTATTGCTCGGGGCTGGTGATCTCGTTCATAGACTCGAC
GCAAGAAAAAGGAACAGCGGAAAAAACAACGGGCACGGTGCCGTTGCCGGTACCGTGCCCGATGTTAGCGGA
CTGCCGCGGACACGCATATGCCCGCCCAGCCCTACCGATCGGATCGCTTACTCAGCGACGATGATCAGCTTC
AGAGTGGTTTCCACGTCGGTGTGCAGGTGCACGGCGACGTCGAACTCACCGGTGTTGCGCAGCGCGCCGTTG
GGCAGGCGAACTTCGGCTTTTTCCAGCGGGTAA