ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6796

TrivialName: PA14_65070

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_65070

PAO1 Ortholog Locus:

Sequence Length: 2559

Protein Length: 852

Start: 5799908

Stop: 5802466

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAC09550.1| (AL939115) putative transcriptional-repair coupling factor [Streptomyces coelicolor A3(2)] Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 22/160 (13%)

Sequence:

TTGTGCCAGCGCCGCCAGGCCCGGGCGACCAGGAGGTCGCGCCACGGCGATGCACCGCGACGGTGCGCGACC
GCTGGCAGGGTTGCAGCCACGCACCCTTTGCGGGCGGCAGGGCCGCCCCGGCGATCAGCGCGGGATGTTCGG
CTGGCGCGGCTTCTTCTTGCCCTTGGCGAAGGCCGCCGCCTTGTTCTGCTGGCCCTTGCTCCACGGCTGGCC
ACCGTCGCTGGCGCGGGGTGGCAGGCCGGTATGCTGGGTCAGCAGCTTGCCGGCCTTCTTGCTGCCGGCCGG
CGTCGAGTTCTTCCGCCGGGCGCTCTGGTATTCGCCGGTATCCGGCTGGTAGGTCGGGATCAGGTGGTGCTT
GCCATTGCCGATCAGGTCAGCGCGCCCCATCCGCTCCAGCGCCTCGCGCAGCAGCGGCCAGCCTTTCGGGTC
GTGGTAGCGCAGGAAGGCCTTGTGCAGGCGCCGCTGCTGGTCGCTCTTGACGATGGTCACGCCATCGCTCTT
GTAGGTGACCTTGCGCAGCGGGTTCTTGCCCGAGTGATACATCGCGGTGGCGGTGGCCATCGGCGAGGGATA
GAACGCCTGGACCTGGTCGGCGCGGAAGCCGTTGCGCTTGAGCCACAGGGCCAGGTTCATCATGTCTTCGTC
GGTGGTCCCGGGGTGGGCGGCGATGAAGTACGGGATCAGGTACTGCTCCTTGCCGGCTTCCTTCGAGAACTT
CTCGAACATCTGCTTGAAGCGGTCGTAGGTGCCGATCCCCGGTTTCATCATCTTGTCCAGCGGACCGCGCTC
GGTGTGCTCCGGGGCGATCTTCAGGTAGCCGCCGACGTGGTGGGTCACCAGTTCCTTGACGTACTCGGGCGA
CTCGACGGCGAGGTCGTAGCGCAGGCCGGAGGCGATCAGGATCTTCTTCACCCCCGGCAGCGCCCGGGCCTT
GCGGTACAGCTCGATCAGCGAGCTGTGGTCGGTATCGAGGTTCTCGCAGATGCCGGGGAACACGCAGGACGG
CTTGCGGCAGTGCCGCTCGATGTCCGGGCTCTTGCAGGCGATGCGGTACATGTTCGCCGTCGGTCCGCCAAG
GTCGGAGACCACGCCGGTGAAGCCGGGCACCTTGTCGCGCATCTCCTCGATCTCGCGGATGATCGAGTCGTG
CGAGCGGTTCTGGATGATCCGTCCCTCATGCTCGGTGATCGAGCAGAAGGTGCAGCCGCCGAAGCAGCCACG
CATGATGTTCACCGAGAAGCGGATCATCTCGTAGGCGGGAATCTTCGCCTTGCCGTAGGCCGGGTGCGGTAC
GCGGGCATAGGGCATGCCGAACACGTAGTCCATTTCCTCGGTGCTCATCGGAATGGGCGGCGGGTTGAACCA
GACATCCACTTCGCCGTGCTTCTGCACCAGGGCACGGGCGTTGCCCGGGTTGGTCTCCAGGTGCAGCACGCG
GTTGGCGTGGGCATAGAGCACCGGGTCGTTGCGCACCTTCTCGAAAGACGGCAGGCGGATCACGGTCTTCTC
CCGGGTCAGCCTGGGGTTCGCCAGCAACTGCACGACCTTGGCTTCCTGCGGGTCCTCCTGCACGCCCTTTTC
CTGCTCGATGGCGCAGGCGGCAGTGTCCTGGGTATTCACGTAGGGATTGATGATCTTGTCGATCTTGCCCGG
CCGGTCGATCCGCGTGGAATCGATCTCGAACCAGCCCTCCGGGGTGTCGCGACGGACGAAGGCGGTGCCGCG
CACGTCGGTGATCGCGCTCAGCGGTTCGCCCTGGGCCAGGCGCTGGGCGATTTCCACCACCGCACGCTCGGC
GTTGCCGTAGAGCAGGATGTCGGCCGTGGCGTCCATCAGGATCGAGCGGCGGACCTTGTCCTGCCAGTAGTC
GTAATGGGCGATACGGCGCAACGAGGCCTCGATCCCGCCGAGGATCACCGGCACATGGCTGTAGGCCTCCTT
GCAGCGCTGGCTGTAGACCAGGCTGGCGCGGTCCGGGCGCTTGCCGGCCAGGCCGCCGGGGGTGTAGGCGTC
GTCGGAACGGACCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCCGCCACGCCGAA
GAACAGGTTCGGCTCGCCGAGCTTCATGAAGTCGTCCTTCGACTGCCAGTCCGGCTGGGCGATGATGCCGAC
GCGGAACCCCTGGGCCTCCAGCAGGCGGCCGATGATGGCCATGCCGAAGGACGGGTGGTCGACGTAGGCATC
GCCGGTGACGATGATGATGTCGCAGGAGTCCCAGCCGAGCTGATCCATCTCTTCCCTACTCATAGGCAGGAA
GGGCGCCGGACCGAAACACTCGGCCCAGTACTTGGGATAGTCGAACAGCGGCTTGGCGGCTTGCATCACGGG
CACCAGGGGGTATCTCTAGGAATAGGGGGTCGCGAAAACGCGGGCGCGGAATATAGCACAAAAAATGAGCAA
TTCCGACGTTTTCACTGGGTATTGCCTGCCGTCGGCCGGCTTCGAAAAAATGCCATCATTTCGCCACCTTCT
TTCTATACTCCATTCATCGTCATCTCACCCGGCCTCTAA

Translation:

MCQRRQARATRRSRHGDAPRRCATAGRVAATHPLRAAGPPRRSARDVRLARLLLALGEGRRLVLLALAPRLA
TVAGAGWQAGMLGQQLAGLLAAGRRRVLPPGALVFAGIRLVGRDQVVLAIADQVSAPHPLQRLAQQRPAFRV
VVAQEGLVQAPLLVALDDGHAIALVGDLAQRVLARVIHRGGGGHRRGIERLDLVGAEAVALEPQGQVHHVFV
GGPGVGGDEVRDQVLLLAGFLRELLEHLLEAVVGADPRFHHLVQRTALGVLRGDLQVAADVVGHQFLDVLGR
LDGEVVAQAGGDQDLLHPRQRPGLAVQLDQRAVVGIEVLADAGEHAGRLAAVPLDVRALAGDAVHVRRRSAK
VGDHAGEAGHLVAHLLDLADDRVVRAVLDDPSLMLGDRAEGAAAEAATHDVHREADHLVGGNLRLAVGRVRY
AGIGHAEHVVHFLGAHRNGRRVEPDIHFAVLLHQGTGVARVGLQVQHAVGVGIEHRVVAHLLERRQADHGLL
PGQPGVRQQLHDLGFLRVLLHALFLLDGAGGSVLGIHVGIDDLVDLARPVDPRGIDLEPALRGVATDEGGAA
HVGDRAQRFALGQALGDFHHRTLGVAVEQDVGRGVHQDRAADLVLPVVVMGDTAQRGLDPAEDHRHMAVGLL
AALAVDQAGAVRALAGQAAGGVGVVGTDLLVRGVAVDHRVHVAGRHAEEQVRLAELHEVVLRLPVRLGDDAD
AEPLGLQQAADDGHAEGRVVDVGIAGDDDDVAGVPAELIHLFPTHRQEGRRTETLGPVLGIVEQRLGGLHHG
HQGVSLGIGGRENAGAEYSTKNEQFRRFHWVLPAVGRLRKNAIISPPSFYTPFIVISPGL*

AnnotationID:6797 GeneID:6796

AnnotatorUID: diggins

Modification Date/Time: 2005-03-13 11:11:42

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16556

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30675