ViewGene
Locus Name:
GeneID:
Location:

GeneID:6794
TrivialName: PA14_64970
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_64970
PAO1 Ortholog Locus:
Sequence Length:834
Protein Length:277
Start: 5791867
Stop: 5791034
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGTAGGTGTCGACGATCACCCGCGCGGCTTCCTCGCGCAGCGGCTGGCCGTGCAGGAAGGCGTCGATCTC
GGCATAGGTGACGCCGTGGGAAGCCTCGTCCGGATGGCCGGGGCGCAGGTCCTCGAGGTCGGCGGTGGGGAT
CTTCTCCACCAGGTTCTCCGGAGCGCCGAGGGCGCGGGCGAGGGCGCGCACCTGATGCTTGGCCAGGCCGCT
GAGCGGAGCCAGGTCGCAGGCGCCGTCGCCGAACTTGGTGAAGAACCCCATGACCGCCTCGGCGGCATGGTC
GGTGCCGATCACCAGGCCGCCGCGGGCGCCGGCGATGGCGTACTGGGCGACCATGCGGATGCGCGCCTTGAT
ATTGCCGATGACGAAGTCGCTCTTCGCCGGCTCGAGTCCTTCCAGGGCTTCCAGCTGTTCCGCCAGGGCTTT
CACCGACGGACCGATGTTGACGGTCTGCTCTTCGTCGGCGCGGATGGTCGCCAGCGAGGCCTGGGCATCGGC
CTCGTCCTGCTGCACCTGGTAGGGCAGGCGCACGGCGATGAAGCGGTAGGCCTGGTCGCCGGTCTGCTCGCG
CAGTTGCTCGACGGCGCGCTGGGCCAGCAGGCCGGCGGTGAGCGAGTCGACGCCGCCGCTGATCCCCAGCAC
CAGGGTCTTCAGCCCGGCATCCTTCAGGCACTGCTGGATGAAGGCGATGCGCCGGGCGATCTGCGCCTGCAC
GTCGGCCTCCGACTGGAACGGCGGCTGGACCTGCAGGGCTTGGGCGATGTCGCGTTGGATCTGTTGCATGTT
CGGGCTCCCGTTAGGTACGAAAGGATTAGGCCGGCACGTTGA
Translation:
MVGVDDHPRGFLAQRLAVQEGVDLGIGDAVGSLVRMAGAQVLEVGGGDLLHQVLRSAEGAGEGAHLMLGQAA
ERSQVAGAVAELGEEPHDRLGGMVGADHQAAAGAGDGVLGDHADARLDIADDEVALRRLESFQGFQLFRQGF
HRRTDVDGLLFVGADGRQRGLGIGLVLLHLVGQAHGDEAVGLVAGLLAQLLDGALGQQAGGERVDAAADPQH
QGLQPGILQALLDEGDAPGDLRLHVGLRLERRLDLQGLGDVALDLLHVRAPVRYERIRPAR*
AnnotationID:6795GeneID:6794
AnnotatorUID: diggins
Modification Date/Time: 2005-03-13 11:11:31
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16552




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30671




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49796How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 5055548Stop: 5054715

          
Length: 834


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGGTAGGTGTCGACGATCACCCGCGCGGCTTCCTCGCGCAGCGGCTGGCCGTGCAGGAAGGCGTCGATCTC 
GGCATAGGTGACGCCGTGGGAAGCCTCGTCCGGATGGCCGGGGCGCAGGTCCTCGAGGTCGGCGGTGGGGAT 
CTTCTCCACCAGGTTCTCCGGAGCGCCGAGGGCGCGGGCGAGGGCGCGCACCTGATGCTTGGCCAGGCCGCT 
GAGCGGAGCCAGGTCGCAGGCGCCGTCGCCGAACTTGGTGAAGAACCCCATGACCGCCTCGGCGGCATGGTC 
GGTGCCGATCACCAGGCCGCCGCGGGCGCCGGCGATGGCGTACTGGGCGACCATGCGGATGCGCGCCTTGAT 
ATTGCCGATGACGAAGTCGCTCTTCGCCGGCTCGAGTCCTTCCAGGGCTTCCAGCTGTTCCGCCAGGGCTTT 
CACCGACGGACCGATGTTGACGGTCTGCTCTTCGTCGGCGCGGATGGTCGCCAGCGAGGCCTGGGCATCGGC 
CTCGTCCTGCTGCACCTGGTAGGGCAGGCGCACGGCGATGAAGCGGTAGGCCTGGTCGCCGGTCTGCTCGCG 
CAGTTGCTCGACGGCGCGCTGGGCCAGCAGGCCGGCGGTGAGCGAGTCGACGCCGCCGCTGATCCCCAGCAC 
CAGGGTCTTCAGCCCGGCATCCTTCAGGCACTGCTGGATGAAGGCGATGCGCCGGGCGATCTGCGCCTGCAC 
GTCGGCCTCCGACTGGAACGGCGGCTGGACCTGCAGGGCTTGGGCGATGTCGCGTTGGATCTGTTGCATGTT 
CGGGCTCCCGTTAGGTACGAAAGGATTAGGCCGGCACGTTGA